RNA–Protein interactions for RNA: ENST00000637550.1

CACNB4-258, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 3,038 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-258ENST00000637550 DDX10Q13206 875 aaKnown RBP7.58□□□□□ -1.2
CACNB4-258ENST00000637550 SPDYE2Q495Y8 402 aa7.58□□□□□ -1.2
CACNB4-258ENST00000637550 TTC37Q6PGP7 1564 aa7.57□□□□□ -1.2
CACNB4-258ENST00000637550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.57□□□□□ -1.2
CACNB4-258ENST00000637550 SSUH2Q9Y2M2 353 aa7.57□□□□□ -1.2
CACNB4-258ENST00000637550 ABCC10Q5T3U5 1492 aa7.57□□□□□ -1.2
CACNB4-258ENST00000637550 TONSLQ96HA7 1378 aa7.57□□□□□ -1.2
CACNB4-258ENST00000637550 PAXIP1Q6ZW49 1069 aaPredicted RBP7.56□□□□□ -1.2
CACNB4-258ENST00000637550 HOMEZQ8IX15 550 aa7.56□□□□□ -1.2
CACNB4-258ENST00000637550 MIA2Q96PC5 1412 aa7.56□□□□□ -1.2
CACNB4-258ENST00000637550 SHROOM2Q13796 1616 aa7.56□□□□□ -1.2
CACNB4-258ENST00000637550 CLASP1Q7Z460 1538 aa7.56□□□□□ -1.2
CACNB4-258ENST00000637550 PPP1R15AO75807 674 aaPredicted RBP7.56□□□□□ -1.2
CACNB4-258ENST00000637550 CHMP4AQ9BY43 222 aa7.56□□□□□ -1.2
CACNB4-258ENST00000637550 DNMT1P26358 1616 aaKnown RBP7.56□□□□□ -1.2
CACNB4-258ENST00000637550 CDC42BPBQ9Y5S2 1711 aa7.55□□□□□ -1.2
CACNB4-258ENST00000637550 L3MBTL2Q969R5 705 aa7.55□□□□□ -1.2
CACNB4-258ENST00000637550 ABCC2Q92887 1545 aa7.54□□□□□ -1.2
CACNB4-258ENST00000637550 PKD2Q13563 968 aa7.54□□□□□ -1.2
CACNB4-258ENST00000637550 AFAP1Q8N556 730 aa7.54□□□□□ -1.2
CACNB4-258ENST00000637550 GCC2Q8IWJ2 1684 aa7.54□□□□□ -1.2
CACNB4-258ENST00000637550 ARHGAP5Q13017 1502 aa7.54□□□□□ -1.2
CACNB4-258ENST00000637550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.54□□□□□ -1.2
CACNB4-258ENST00000637550 HAP1P54257 671 aaPredicted RBP7.54□□□□□ -1.2
CACNB4-258ENST00000637550 OSCARQ8IYS5 282 aa7.54□□□□□ -1.2
CACNB4-258ENST00000637550 NCOA1Q15788 1441 aa7.53□□□□□ -1.2
CACNB4-258ENST00000637550 AKNAQ7Z591 1439 aa7.53□□□□□ -1.2
CACNB4-258ENST00000637550 SYCP2Q9BX26 1530 aa7.53□□□□□ -1.2
CACNB4-258ENST00000637550 SAMD9LQ8IVG5 1584 aa7.53□□□□□ -1.2
CACNB4-258ENST00000637550 ZCCHC11Q5TAX3 1644 aaKnown RBP7.53□□□□□ -1.2
CACNB4-258ENST00000637550 NBPF8Q3BBV2 869 aa7.53□□□□□ -1.2
CACNB4-258ENST00000637550 KDM2AQ9Y2K7 1162 aa7.53□□□□□ -1.2
CACNB4-258ENST00000637550 TSPY4P0CV99 314 aa7.53□□□□□ -1.2
CACNB4-258ENST00000637550 TSPY10P0CW01 314 aa7.53□□□□□ -1.2
CACNB4-258ENST00000637550 C9orf84Q5VXU9 1444 aa7.53□□□□□ -1.2
CACNB4-258ENST00000637550 CYB5RLQ6IPT4 315 aa7.52□□□□□ -1.21
CACNB4-258ENST00000637550 ARHGEF12Q9NZN5 1544 aa7.52□□□□□ -1.21
CACNB4-258ENST00000637550 ITSN2Q9NZM3 1697 aa7.52□□□□□ -1.21
CACNB4-258ENST00000637550 ADCY10Q96PN6 1610 aa7.52□□□□□ -1.21
CACNB4-258ENST00000637550 NUP155O75694 1391 aa7.52□□□□□ -1.21
CACNB4-258ENST00000637550 AMER1Q5JTC6 1135 aaPredicted RBP7.52□□□□□ -1.21
CACNB4-258ENST00000637550 POLR3GLQ9BT43 218 aa7.52□□□□□ -1.21
CACNB4-258ENST00000637550 KIF15Q9NS87 1388 aa7.51□□□□□ -1.21
CACNB4-258ENST00000637550 RSPH6AQ9H0K4 717 aa7.51□□□□□ -1.21
CACNB4-258ENST00000637550 PZPP20742 1482 aa7.51□□□□□ -1.21
CACNB4-258ENST00000637550 ANKRD50Q9ULJ7 1429 aa7.5□□□□□ -1.21
CACNB4-258ENST00000637550 SENP3-EIF4A1A0A087X0R7 540 aa7.5□□□□□ -1.21
CACNB4-258ENST00000637550 RGL3Q3MIN7 710 aa7.5□□□□□ -1.21
CACNB4-258ENST00000637550 KDM5BQ9UGL1 1544 aa7.5□□□□□ -1.21
CACNB4-258ENST00000637550 MBD5Q9P267 1494 aa7.5□□□□□ -1.21
CACNB4-258ENST00000637550 TRAPPC8Q9Y2L5 1435 aa7.5□□□□□ -1.21
CACNB4-258ENST00000637550 ANKRD30AQ9BXX3 1397 aa7.5□□□□□ -1.21
CACNB4-258ENST00000637550 C11orf95C9JLR9 678 aaPredicted RBP7.49□□□□□ -1.21
CACNB4-258ENST00000637550 HSPA5P11021 654 aaKnown RBP7.49□□□□□ -1.21
CACNB4-258ENST00000637550 CROCC2H7BZ55 1655 aa7.49□□□□□ -1.21
CACNB4-258ENST00000637550 ANKRD30BQ9BXX2 1392 aa7.48□□□□□ -1.21
CACNB4-258ENST00000637550 PREX2Q70Z35 1606 aa7.48□□□□□ -1.21
CACNB4-258ENST00000637550 BRD2P25440 801 aaKnown RBP7.48□□□□□ -1.21
CACNB4-258ENST00000637550 NPM2Q86SE8 214 aaKnown RBP7.48□□□□□ -1.21
CACNB4-258ENST00000637550 PLEKHH2Q8IVE3 1493 aa7.48□□□□□ -1.21
CACNB4-258ENST00000637550 BCANQ96GW7 911 aa7.47□□□□□ -1.21
CACNB4-258ENST00000637550 ROCK1Q13464 1354 aa7.47□□□□□ -1.21
CACNB4-258ENST00000637550 ADGBQ8N7X0 1667 aa7.47□□□□□ -1.21
CACNB4-258ENST00000637550 NBR1Q14596 966 aa7.47□□□□□ -1.21
CACNB4-258ENST00000637550 MYO5CQ9NQX4 1742 aa7.46□□□□□ -1.21
CACNB4-258ENST00000637550 CFAP65Q6ZU64 1925 aaKnown RBP7.46□□□□□ -1.21
CACNB4-258ENST00000637550 ASXL2Q76L83 1435 aa7.46□□□□□ -1.22
CACNB4-258ENST00000637550 NAP1L5Q96NT1 182 aaPredicted RBP7.46□□□□□ -1.22
CACNB4-258ENST00000637550 STAG3Q9UJ98 1225 aa7.46□□□□□ -1.22
CACNB4-258ENST00000637550 CCDC141Q6ZP82 1450 aa7.45□□□□□ -1.22
CACNB4-258ENST00000637550 EFCAB2Q5VUJ9 269 aa7.45□□□□□ -1.22
CACNB4-258ENST00000637550 ZNF692Q9BU19 519 aaPredicted RBP7.45□□□□□ -1.22
CACNB4-258ENST00000637550 RAPGEF3O95398 923 aa7.44□□□□□ -1.22
CACNB4-258ENST00000637550 C14orf37Q86TY3 774 aa7.44□□□□□ -1.22
CACNB4-258ENST00000637550 DCAF11Q8TEB1 546 aa7.44□□□□□ -1.22
CACNB4-258ENST00000637550 NPM1P06748 294 aaKnown RBP eCLIP7.44□□□□□ -1.22
CACNB4-258ENST00000637550 SPAG9O60271 1321 aaKnown RBP7.43□□□□□ -1.22
CACNB4-258ENST00000637550 WASHC2AQ641Q2 1341 aa7.43□□□□□ -1.22
CACNB4-258ENST00000637550 PLCH2O75038 1416 aa7.43□□□□□ -1.22
CACNB4-258ENST00000637550 SCAPERQ9BY12 1400 aa7.43□□□□□ -1.22
CACNB4-258ENST00000637550 ADGRL2O95490 1459 aa7.43□□□□□ -1.22
CACNB4-258ENST00000637550 FANCIQ9NVI1 1328 aa7.43□□□□□ -1.22
CACNB4-258ENST00000637550 WDR7Q9Y4E6 1490 aa7.43□□□□□ -1.22
CACNB4-258ENST00000637550 KIAA1107Q9UPP5 1409 aa7.43□□□□□ -1.22
CACNB4-258ENST00000637550 RBM42Q9BTD8 480 aaKnown RBP7.42□□□□□ -1.22
CACNB4-258ENST00000637550 NAP1L2Q9ULW6 460 aaPredicted RBP7.42□□□□□ -1.22
CACNB4-258ENST00000637550 TEX14Q8IWB6 1497 aa7.42□□□□□ -1.22
CACNB4-258ENST00000637550 KIF3BO15066 747 aa7.42□□□□□ -1.22
CACNB4-258ENST00000637550 CCDC184Q52MB2 194 aa7.42□□□□□ -1.22
CACNB4-258ENST00000637550 RPRD2Q5VT52 1461 aaKnown RBP7.42□□□□□ -1.22
CACNB4-258ENST00000637550 NBPF1Q3BBV0 1214 aa7.41□□□□□ -1.22
CACNB4-258ENST00000637550 RSPH4AQ5TD94 716 aa7.41□□□□□ -1.22
CACNB4-258ENST00000637550 FANCAO15360 1455 aa7.41□□□□□ -1.22
CACNB4-258ENST00000637550 UHRF1BP1LA0JNW5 1464 aa7.41□□□□□ -1.22
CACNB4-258ENST00000637550 VASPP50552 380 aaPredicted RBP7.4□□□□□ -1.22
CACNB4-258ENST00000637550 NUTM2DQ5VT03 806 aaPredicted RBP7.4□□□□□ -1.22
CACNB4-258ENST00000637550 FAM135AQ9P2D6 1515 aa7.4□□□□□ -1.22
CACNB4-258ENST00000637550 ARHGEF5Q12774 1597 aa7.4□□□□□ -1.23
CACNB4-258ENST00000637550 EIF4G2P78344 907 aaKnown RBP eCLIP7.4□□□□□ -1.23
CACNB4-258ENST00000637550 GGT6Q6P531 493 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms