RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 U2SURPO15042 1029 aaKnown RBP12.01□□□□□ -0.49
CACNA1A-242ENST00000637485 KIF16BQ96L93 1317 aa12.01□□□□□ -0.49
CACNA1A-242ENST00000637485 CCDC191Q8NCU4 936 aa12□□□□□ -0.49
CACNA1A-242ENST00000637485 KIAA1211Q6ZU35 1233 aa12□□□□□ -0.49
CACNA1A-242ENST00000637485 PMFBP1Q8TBY8 1022 aa12□□□□□ -0.49
CACNA1A-242ENST00000637485 TAOK2Q9UL54 1235 aa12□□□□□ -0.49
CACNA1A-242ENST00000637485 L3MBTL2Q969R5 705 aa12□□□□□ -0.49
CACNA1A-242ENST00000637485 JPH4Q96JJ6 628 aa12□□□□□ -0.49
CACNA1A-242ENST00000637485 RCAN3Q9UKA8 241 aa12□□□□□ -0.49
CACNA1A-242ENST00000637485 IGF1RP08069 1367 aa12□□□□□ -0.49
CACNA1A-242ENST00000637485 SRPK2P78362 688 aaKnown RBP12□□□□□ -0.49
CACNA1A-242ENST00000637485 HMMRO75330 724 aa11.99□□□□□ -0.49
CACNA1A-242ENST00000637485 CCAR2Q8N163 923 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-242ENST00000637485 KIF21BO75037 1637 aa11.99□□□□□ -0.49
CACNA1A-242ENST00000637485 UBE2Q2Q8WVN8 375 aa11.99□□□□□ -0.49
CACNA1A-242ENST00000637485 HAP1P54257 671 aaPredicted RBP11.98□□□□□ -0.49
CACNA1A-242ENST00000637485 MFAP1P55081 439 aaKnown RBP11.98□□□□□ -0.49
CACNA1A-242ENST00000637485 CUX1P39880 1505 aa11.98□□□□□ -0.49
CACNA1A-242ENST00000637485 GAPVD1Q14C86 1478 aa11.98□□□□□ -0.49
CACNA1A-242ENST00000637485 CDR1P51861 262 aa11.98□□□□□ -0.49
CACNA1A-242ENST00000637485 GGT6Q6P531 493 aa11.98□□□□□ -0.49
CACNA1A-242ENST00000637485 PDE4CQ08493 712 aa11.97□□□□□ -0.49
CACNA1A-242ENST00000637485 HDGFL2Q7Z4V5 671 aaPredicted RBP11.97□□□□□ -0.49
CACNA1A-242ENST00000637485 H0YHG0 523 aa11.97□□□□□ -0.49
CACNA1A-242ENST00000637485 HNRNPMP52272 730 aaKnown RBP eCLIP11.97□□□□□ -0.49
CACNA1A-242ENST00000637485 HSP90B2PQ58FF3 399 aa11.97□□□□□ -0.49
CACNA1A-242ENST00000637485 ZNF592Q92610 1267 aa11.97□□□□□ -0.49
CACNA1A-242ENST00000637485 STK11IPQ8N1F8 1099 aa11.97□□□□□ -0.49
CACNA1A-242ENST00000637485 AK7Q96M32 723 aa11.97□□□□□ -0.49
CACNA1A-242ENST00000637485 GOLGA6L19H0YKK7 550 aa11.97□□□□□ -0.49
CACNA1A-242ENST00000637485 TAF7LQ5H9L4 462 aa11.97□□□□□ -0.49
CACNA1A-242ENST00000637485 R3HCC1Q9Y3T6 440 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-242ENST00000637485 ERICH3Q5RHP9 1530 aa11.96□□□□□ -0.49
CACNA1A-242ENST00000637485 MRE11P49959 708 aa11.96□□□□□ -0.5
CACNA1A-242ENST00000637485 SPAG9O60271 1321 aaKnown RBP11.96□□□□□ -0.5
CACNA1A-242ENST00000637485 ST18O60284 1047 aa11.95□□□□□ -0.5
CACNA1A-242ENST00000637485 IPO8O15397 1037 aaKnown RBP11.95□□□□□ -0.5
CACNA1A-242ENST00000637485 PDE4AP27815 886 aa11.95□□□□□ -0.5
CACNA1A-242ENST00000637485 HMGN5P82970 282 aaKnown RBP11.95□□□□□ -0.5
CACNA1A-242ENST00000637485 PHLDB1Q86UU1 1377 aa11.95□□□□□ -0.5
CACNA1A-242ENST00000637485 TSPYL1Q9H0U9 437 aa11.94□□□□□ -0.5
CACNA1A-242ENST00000637485 ATP6V1DQ9Y5K8 247 aa11.94□□□□□ -0.5
CACNA1A-242ENST00000637485 FAM161AQ3B820 660 aa11.94□□□□□ -0.5
CACNA1A-242ENST00000637485 USP8P40818 1118 aa11.93□□□□□ -0.5
CACNA1A-242ENST00000637485 DCTN1Q14203 1278 aa11.93□□□□□ -0.5
CACNA1A-242ENST00000637485 CCDC39Q9UFE4 941 aa11.93□□□□□ -0.5
CACNA1A-242ENST00000637485 KIF3AQ9Y496 699 aa11.93□□□□□ -0.5
CACNA1A-242ENST00000637485 HSP90B1P14625 803 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-242ENST00000637485 KIF3BO15066 747 aa11.93□□□□□ -0.5
CACNA1A-242ENST00000637485 TSR1Q2NL82 804 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-242ENST00000637485 BECN2A8MW95 431 aa11.92□□□□□ -0.5
CACNA1A-242ENST00000637485 TPM1P09493 284 aa11.92□□□□□ -0.5
CACNA1A-242ENST00000637485 PDE3BQ13370 1112 aa11.92□□□□□ -0.5
CACNA1A-242ENST00000637485 CEP89Q96ST8 783 aa11.92□□□□□ -0.5
CACNA1A-242ENST00000637485 KIF15Q9NS87 1388 aa11.92□□□□□ -0.5
CACNA1A-242ENST00000637485 LEKR1Q6ZMV7 388 aa11.92□□□□□ -0.5
CACNA1A-242ENST00000637485 CCDC144AA2RUR9 1427 aa11.92□□□□□ -0.5
CACNA1A-242ENST00000637485 UACAQ9BZF9 1416 aa11.92□□□□□ -0.5
CACNA1A-242ENST00000637485 PLEKHG5O94827 1062 aa11.92□□□□□ -0.5
CACNA1A-242ENST00000637485 CLSTN1O94985 981 aa11.92□□□□□ -0.5
CACNA1A-242ENST00000637485 NLRP13Q86W25 1043 aa11.92□□□□□ -0.5
CACNA1A-242ENST00000637485 RUFY1Q96T51 708 aa11.92□□□□□ -0.5
CACNA1A-242ENST00000637485 DEF6Q9H4E7 631 aa11.92□□□□□ -0.5
CACNA1A-242ENST00000637485 PTPRGP23470 1445 aa11.91□□□□□ -0.5
CACNA1A-242ENST00000637485 MNS1Q8NEH6 495 aa11.91□□□□□ -0.5
CACNA1A-242ENST00000637485 MYOM3Q5VTT5 1437 aa11.91□□□□□ -0.5
CACNA1A-242ENST00000637485 ERCC4Q92889 916 aaPredicted RBP11.9□□□□□ -0.5
CACNA1A-242ENST00000637485 HSP90AB3PQ58FF7 597 aa11.9□□□□□ -0.5
CACNA1A-242ENST00000637485 FGD6Q6ZV73 1430 aa11.9□□□□□ -0.5
CACNA1A-242ENST00000637485 CHMP5Q9NZZ3 219 aa11.9□□□□□ -0.5
CACNA1A-242ENST00000637485 RAD54L2Q9Y4B4 1467 aa11.9□□□□□ -0.5
CACNA1A-242ENST00000637485 A0A0G2JS52 829 aa11.9□□□□□ -0.5
CACNA1A-242ENST00000637485 HOMER1Q86YM7 354 aa11.9□□□□□ -0.5
CACNA1A-242ENST00000637485 MLECQ14165 292 aa11.9□□□□□ -0.51
CACNA1A-242ENST00000637485 LRRC9Q6ZRR7 1453 aa11.89□□□□□ -0.51
CACNA1A-242ENST00000637485 CASKIN1Q8WXD9 1431 aa11.89□□□□□ -0.51
CACNA1A-242ENST00000637485 SAFB2Q14151 953 aaKnown RBP eCLIP11.88□□□□□ -0.51
CACNA1A-242ENST00000637485 IL27Q8NEV9 243 aa11.88□□□□□ -0.51
CACNA1A-242ENST00000637485 FOXD4L1Q9NU39 408 aa11.88□□□□□ -0.51
CACNA1A-242ENST00000637485 STK26Q9P289 416 aa11.88□□□□□ -0.51
CACNA1A-242ENST00000637485 CFTRP13569 1480 aa11.88□□□□□ -0.51
CACNA1A-242ENST00000637485 MYBBP1AQ9BQG0 1328 aaKnown RBP11.87□□□□□ -0.51
CACNA1A-242ENST00000637485 CENPQQ7L2Z9 268 aaPredicted RBP11.87□□□□□ -0.51
CACNA1A-242ENST00000637485 TERF2IPQ9NYB0 399 aa11.87□□□□□ -0.51
CACNA1A-242ENST00000637485 NEFHP12036 1026 aa11.87□□□□□ -0.51
CACNA1A-242ENST00000637485 LMOD2Q6P5Q4 547 aa11.87□□□□□ -0.51
CACNA1A-242ENST00000637485 FYCO1Q9BQS8 1478 aa11.87□□□□□ -0.51
CACNA1A-242ENST00000637485 NFKBIBQ15653 356 aa11.87□□□□□ -0.51
CACNA1A-242ENST00000637485 RTF1Q92541 710 aaKnown RBP11.87□□□□□ -0.51
CACNA1A-242ENST00000637485 SLC4A3P48751 1232 aa11.86□□□□□ -0.51
CACNA1A-242ENST00000637485 HMGXB3Q12766 1538 aa11.86□□□□□ -0.51
CACNA1A-242ENST00000637485 U2AF1L5P0DN76 240 aaPredicted RBP11.86□□□□□ -0.51
CACNA1A-242ENST00000637485 U2AF1Q01081 240 aaKnown RBP eCLIP11.86□□□□□ -0.51
CACNA1A-242ENST00000637485 BRPF3Q9ULD4 1205 aa11.86□□□□□ -0.51
CACNA1A-242ENST00000637485 SYNJ1O43426 1573 aa11.86□□□□□ -0.51
CACNA1A-242ENST00000637485 IFT57Q9NWB7 429 aa11.86□□□□□ -0.51
CACNA1A-242ENST00000637485 WASHC2CQ9Y4E1 1318 aa11.85□□□□□ -0.51
CACNA1A-242ENST00000637485 IPO7O95373 1038 aaKnown RBP11.85□□□□□ -0.51
CACNA1A-242ENST00000637485 RBM10P98175 930 aaKnown RBP11.85□□□□□ -0.51
CACNA1A-242ENST00000637485 GOLGA2Q08379 1002 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms