RNA–Protein interactions for RNA: ENST00000637354.1

PTPRD-215, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5

Gene PTPRD, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-215ENST00000637354 LARP6Q9BRS8 491 aaKnown RBP10.46□□□□□ -0.73
PTPRD-215ENST00000637354 GOLGA8CPA6NN73 597 aa10.44□□□□□ -0.74
PTPRD-215ENST00000637354 RGS20O76081 388 aa10.44□□□□□ -0.74
PTPRD-215ENST00000637354 MAP3K9P80192 1104 aa10.44□□□□□ -0.74
PTPRD-215ENST00000637354 THSD4Q6ZMP0 1018 aa10.44□□□□□ -0.74
PTPRD-215ENST00000637354 CADPS2Q86UW7 1296 aa10.44□□□□□ -0.74
PTPRD-215ENST00000637354 MRPL50Q8N5N7 158 aaKnown RBP10.44□□□□□ -0.74
PTPRD-215ENST00000637354 WDR70Q9NW82 654 aa10.44□□□□□ -0.74
PTPRD-215ENST00000637354 ADAM33Q9BZ11 813 aa10.42□□□□□ -0.74
PTPRD-215ENST00000637354 PPP1R3GB7ZBB8 358 aa10.41□□□□□ -0.74
PTPRD-215ENST00000637354 PTPN5P54829 565 aa10.41□□□□□ -0.74
PTPRD-215ENST00000637354 WNT2BQ93097 391 aa10.41□□□□□ -0.74
PTPRD-215ENST00000637354 FBXW7Q969H0 707 aa10.4□□□□□ -0.74
PTPRD-215ENST00000637354 P3H3Q8IVL6 736 aa10.38□□□□□ -0.75
PTPRD-215ENST00000637354 RABGEF1Q9UJ41 708 aa10.37□□□□□ -0.75
PTPRD-215ENST00000637354 PHF14O94880 888 aa10.36□□□□□ -0.75
PTPRD-215ENST00000637354 TYW1BQ6NUM6 668 aa10.36□□□□□ -0.75
PTPRD-215ENST00000637354 EMILIN3Q9NT22 766 aa10.36□□□□□ -0.75
PTPRD-215ENST00000637354 PCDHGA10Q9Y5H3 936 aa10.35□□□□□ -0.75
PTPRD-215ENST00000637354 LAPTM4BQ86VI4 370 aa10.33□□□□□ -0.76
PTPRD-215ENST00000637354 KCNV2Q8TDN2 545 aa10.33□□□□□ -0.76
PTPRD-215ENST00000637354 A0A0G2JS52 829 aa10.32□□□□□ -0.76
PTPRD-215ENST00000637354 ONECUT3O60422 494 aaPredicted RBP10.32□□□□□ -0.76
PTPRD-215ENST00000637354 ANKK1Q8NFD2 765 aa10.32□□□□□ -0.76
PTPRD-215ENST00000637354 CAMK2BQ13554 666 aa10.31□□□□□ -0.76
PTPRD-215ENST00000637354 NYAP1Q6ZVC0 841 aa10.31□□□□□ -0.76
PTPRD-215ENST00000637354 EPAS1Q99814 870 aa10.31□□□□□ -0.76
PTPRD-215ENST00000637354 ITGBL1O95965 494 aaPredicted RBP10.27□□□□□ -0.77
PTPRD-215ENST00000637354 COL9A1P20849 921 aa10.27□□□□□ -0.77
PTPRD-215ENST00000637354 PROX2Q3B8N5 592 aa10.27□□□□□ -0.77
PTPRD-215ENST00000637354 SOWAHBA6NEL2 793 aa10.24□□□□□ -0.77
PTPRD-215ENST00000637354 C6orf132Q5T0Z8 1188 aa10.23□□□□□ -0.77
PTPRD-215ENST00000637354 E2F4Q16254 413 aa10.22□□□□□ -0.77
PTPRD-215ENST00000637354 ZFRQ96KR1 1074 aaKnown RBP10.22□□□□□ -0.77
PTPRD-215ENST00000637354 IRX2Q9BZI1 471 aaPredicted RBP10.22□□□□□ -0.77
PTPRD-215ENST00000637354 TRIM6-TRIM34B2RNG4 842 aa10.21□□□□□ -0.77
PTPRD-215ENST00000637354 DPYSL4O14531 572 aa10.21□□□□□ -0.77
PTPRD-215ENST00000637354 KIAA1468Q9P260 1216 aa10.21□□□□□ -0.77
PTPRD-215ENST00000637354 BCAMP50895 628 aa10.19□□□□□ -0.78
PTPRD-215ENST00000637354 FAM98CQ17RN3 349 aaKnown RBP10.19□□□□□ -0.78
PTPRD-215ENST00000637354 LMOD2Q6P5Q4 547 aa10.18□□□□□ -0.78
PTPRD-215ENST00000637354 ARHGEF1Q92888 912 aaKnown RBP10.18□□□□□ -0.78
PTPRD-215ENST00000637354 TULP1O00294 542 aaPredicted RBP10.17□□□□□ -0.78
PTPRD-215ENST00000637354 PDIA6Q15084 440 aa10.16□□□□□ -0.78
PTPRD-215ENST00000637354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.16□□□□□ -0.78
PTPRD-215ENST00000637354 SPDYE16A6NNV3 312 aaPredicted RBP10.15□□□□□ -0.78
PTPRD-215ENST00000637354 EN1Q05925 392 aaPredicted RBP10.15□□□□□ -0.78
PTPRD-215ENST00000637354 LRCH3Q96II8 777 aa10.14□□□□□ -0.79
PTPRD-215ENST00000637354 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.14□□□□□ -0.79
PTPRD-215ENST00000637354 SEPT9Q9UHD8 586 aaPredicted RBP10.14□□□□□ -0.79
PTPRD-215ENST00000637354 TSR3Q9UJK0 312 aaKnown RBP10.14□□□□□ -0.79
PTPRD-215ENST00000637354 KCNC4Q03721 635 aa10.13□□□□□ -0.79
PTPRD-215ENST00000637354 WBP1LQ9NX94 342 aa10.13□□□□□ -0.79
PTPRD-215ENST00000637354 SEMA3EO15041 775 aa10.12□□□□□ -0.79
PTPRD-215ENST00000637354 PACS2Q86VP3 889 aa10.12□□□□□ -0.79
PTPRD-215ENST00000637354 DDX12PQ92771 950 aa10.12□□□□□ -0.79
PTPRD-215ENST00000637354 CERKQ8TCT0 537 aa10.11□□□□□ -0.79
PTPRD-215ENST00000637354 RBM33Q96EV2 1170 aaKnown RBP10.11□□□□□ -0.79
PTPRD-215ENST00000637354 MAP3K7O43318 606 aa10.1□□□□□ -0.79
PTPRD-215ENST00000637354 HPS5Q9UPZ3 1129 aa10.09□□□□□ -0.79
PTPRD-215ENST00000637354 ARIH1Q9Y4X5 557 aaPredicted RBP10.09□□□□□ -0.79
PTPRD-215ENST00000637354 TSKSQ9UJT2 592 aa10.07□□□□□ -0.8
PTPRD-215ENST00000637354 TESPA1A2RU30 521 aaPredicted RBP10.06□□□□□ -0.8
PTPRD-215ENST00000637354 CCDC180Q9P1Z9 1646 aa10.05□□□□□ -0.8
PTPRD-215ENST00000637354 TSR1Q2NL82 804 aaKnown RBP10.05□□□□□ -0.8
PTPRD-215ENST00000637354 NBPF26B4DH59 902 aa10.03□□□□□ -0.8
PTPRD-215ENST00000637354 PRSS12P56730 875 aa10.03□□□□□ -0.8
PTPRD-215ENST00000637354 PPP4CP60510 307 aa10.03□□□□□ -0.8
PTPRD-215ENST00000637354 LAPTM4AQ15012 233 aa10.03□□□□□ -0.8
PTPRD-215ENST00000637354 CDCA7LQ96GN5 454 aa10.03□□□□□ -0.8
PTPRD-215ENST00000637354 RBM27Q9P2N5 1060 aaKnown RBP10.03□□□□□ -0.8
PTPRD-215ENST00000637354 SMYD5Q6GMV2 418 aa10.02□□□□□ -0.81
PTPRD-215ENST00000637354 ZC3H15Q8WU90 426 aaKnown RBP10.02□□□□□ -0.81
PTPRD-215ENST00000637354 NECTIN2Q92692 538 aa9.99□□□□□ -0.81
PTPRD-215ENST00000637354 SAMD7Q7Z3H4 446 aa9.98□□□□□ -0.81
PTPRD-215ENST00000637354 TATDN2Q93075 761 aa9.97□□□□□ -0.81
PTPRD-215ENST00000637354 Q6ZNB5 142 aa9.96□□□□□ -0.82
PTPRD-215ENST00000637354 HDGFP51858 240 aaKnown RBP9.95□□□□□ -0.82
PTPRD-215ENST00000637354 TJAP1Q5JTD0 557 aa9.95□□□□□ -0.82
PTPRD-215ENST00000637354 IL21Q9HBE4 155 aa9.95□□□□□ -0.82
PTPRD-215ENST00000637354 PNMA3Q9UL41 463 aa9.95□□□□□ -0.82
PTPRD-215ENST00000637354 GRXCR2A6NFK2 248 aa9.94□□□□□ -0.82
PTPRD-215ENST00000637354 SLC24A3Q9HC58 644 aa9.94□□□□□ -0.82
PTPRD-215ENST00000637354 FAM198AQ9UFP1 575 aa9.94□□□□□ -0.82
PTPRD-215ENST00000637354 SMAPO00193 183 aa9.93□□□□□ -0.82
PTPRD-215ENST00000637354 MLLT3P42568 568 aaPredicted RBP9.93□□□□□ -0.82
PTPRD-215ENST00000637354 ABCC9O60706 1549 aa9.92□□□□□ -0.82
PTPRD-215ENST00000637354 OSBPP22059 807 aa9.92□□□□□ -0.82
PTPRD-215ENST00000637354 PRIM1P49642 420 aaKnown RBP9.91□□□□□ -0.82
PTPRD-215ENST00000637354 TMEM132AQ24JP5 1023 aa9.91□□□□□ -0.82
PTPRD-215ENST00000637354 RBM26Q5T8P6 1007 aaKnown RBP9.91□□□□□ -0.82
PTPRD-215ENST00000637354 MTRQ99707 1265 aa9.91□□□□□ -0.82
PTPRD-215ENST00000637354 GTF3C3Q9Y5Q9 886 aa9.9□□□□□ -0.82
PTPRD-215ENST00000637354 V9GY48 417 aaPredicted RBP9.9□□□□□ -0.82
PTPRD-215ENST00000637354 NUDT18Q6ZVK8 323 aa9.89□□□□□ -0.83
PTPRD-215ENST00000637354 TTC13Q8NBP0 860 aa9.89□□□□□ -0.83
PTPRD-215ENST00000637354 ZMYND10O75800 440 aa9.88□□□□□ -0.83
PTPRD-215ENST00000637354 SLC4A3P48751 1232 aa9.88□□□□□ -0.83
PTPRD-215ENST00000637354 BRPF1P55201 1214 aaPredicted RBP9.88□□□□□ -0.83
PTPRD-215ENST00000637354 NEUROD2Q15784 382 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms