RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 U2AF1Q01081 240 aaKnown RBP eCLIP20.38■□□□□ 0.85
CACNA1A-238ENST00000637276 RBM19Q9Y4C8 960 aaKnown RBP20.37■□□□□ 0.85
CACNA1A-238ENST00000637276 APPP05067 770 aa20.36■□□□□ 0.85
CACNA1A-238ENST00000637276 TTLL5Q6EMB2 1281 aa20.36■□□□□ 0.85
CACNA1A-238ENST00000637276 GPATCH3Q96I76 525 aa20.35■□□□□ 0.85
CACNA1A-238ENST00000637276 ELL2O00472 640 aaPredicted RBP20.35■□□□□ 0.85
CACNA1A-238ENST00000637276 FAM177BA6PVY3 158 aa20.34■□□□□ 0.85
CACNA1A-238ENST00000637276 TMF1P82094 1093 aa20.34■□□□□ 0.85
CACNA1A-238ENST00000637276 STK11IPQ8N1F8 1099 aa20.34■□□□□ 0.85
CACNA1A-238ENST00000637276 TSR1Q2NL82 804 aaKnown RBP20.33■□□□□ 0.85
CACNA1A-238ENST00000637276 CCDC43Q96MW1 224 aaKnown RBP20.33■□□□□ 0.85
CACNA1A-238ENST00000637276 AKAP17AQ02040 695 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-238ENST00000637276 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
CACNA1A-238ENST00000637276 CHMP4CQ96CF2 233 aa20.32■□□□□ 0.84
CACNA1A-238ENST00000637276 MS4A1P11836 297 aa20.32■□□□□ 0.84
CACNA1A-238ENST00000637276 CHMP4BQ9H444 224 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-238ENST00000637276 CCDC97Q96F63 343 aaPredicted RBP20.31■□□□□ 0.84
CACNA1A-238ENST00000637276 VPS37DQ86XT2 251 aa20.31■□□□□ 0.84
CACNA1A-238ENST00000637276 ODF2Q5BJF6 829 aa20.3■□□□□ 0.84
CACNA1A-238ENST00000637276 RRP7AQ9Y3A4 280 aaKnown RBP20.29■□□□□ 0.84
CACNA1A-238ENST00000637276 CT47A1Q5JQC4 288 aaPredicted RBP20.29■□□□□ 0.84
CACNA1A-238ENST00000637276 DCAF8L1A6NGE4 600 aa20.29■□□□□ 0.84
CACNA1A-238ENST00000637276 GBP4Q96PP9 640 aa20.29■□□□□ 0.84
CACNA1A-238ENST00000637276 NGDNQ8NEJ9 315 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-238ENST00000637276 EIF2S2P20042 333 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-238ENST00000637276 ZNF771Q7L3S4 317 aaPredicted RBP20.28■□□□□ 0.84
CACNA1A-238ENST00000637276 FAM184AQ8NB25 1140 aa20.28■□□□□ 0.84
CACNA1A-238ENST00000637276 PLIN1O60240 522 aa20.28■□□□□ 0.84
CACNA1A-238ENST00000637276 HTATSF1O43719 755 aaKnown RBP20.27■□□□□ 0.84
CACNA1A-238ENST00000637276 AMPHP49418 695 aa20.27■□□□□ 0.84
CACNA1A-238ENST00000637276 STK31Q9BXU1 1019 aa20.27■□□□□ 0.84
CACNA1A-238ENST00000637276 CHMP4BP1P59074 171 aa20.26■□□□□ 0.83
CACNA1A-238ENST00000637276 IKQ13123 557 aaPredicted RBP20.26■□□□□ 0.83
CACNA1A-238ENST00000637276 HSP90AB2PQ58FF8 381 aa20.26■□□□□ 0.83
CACNA1A-238ENST00000637276 HDGFL2Q7Z4V5 671 aaPredicted RBP20.26■□□□□ 0.83
CACNA1A-238ENST00000637276 RSF1Q96T23 1441 aaPredicted RBP20.26■□□□□ 0.83
CACNA1A-238ENST00000637276 EIF4G1Q04637 1599 aaKnown RBP20.26■□□□□ 0.83
CACNA1A-238ENST00000637276 SMC4Q9NTJ3 1288 aa20.26■□□□□ 0.83
CACNA1A-238ENST00000637276 TPM2P07951 284 aa20.26■□□□□ 0.83
CACNA1A-238ENST00000637276 KIF16BQ96L93 1317 aa20.25■□□□□ 0.83
CACNA1A-238ENST00000637276 PLCD3Q8N3E9 789 aa20.25■□□□□ 0.83
CACNA1A-238ENST00000637276 NOL10Q9BSC4 688 aaKnown RBP20.25■□□□□ 0.83
CACNA1A-238ENST00000637276 TCERG1O14776 1098 aaKnown RBP20.24■□□□□ 0.83
CACNA1A-238ENST00000637276 CCAR1Q8IX12 1150 aaKnown RBP20.23■□□□□ 0.83
CACNA1A-238ENST00000637276 BCL2L13Q9BXK5 485 aa20.23■□□□□ 0.83
CACNA1A-238ENST00000637276 CCDC27Q2M243 656 aa20.23■□□□□ 0.83
CACNA1A-238ENST00000637276 CALD1Q05682 793 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-238ENST00000637276 GOLGA6L3A6NEY3 463 aa20.21■□□□□ 0.83
CACNA1A-238ENST00000637276 MYCNP04198 464 aaPredicted RBP20.21■□□□□ 0.83
CACNA1A-238ENST00000637276 CEP162Q5TB80 1403 aa20.21■□□□□ 0.83
CACNA1A-238ENST00000637276 SPAG9O60271 1321 aaKnown RBP20.21■□□□□ 0.83
CACNA1A-238ENST00000637276 HSPA5P11021 654 aaKnown RBP20.2■□□□□ 0.82
CACNA1A-238ENST00000637276 SYAP1Q96A49 352 aaPredicted RBP20.2■□□□□ 0.82
CACNA1A-238ENST00000637276 TIMELESSQ9UNS1 1208 aa20.2■□□□□ 0.82
CACNA1A-238ENST00000637276 TTC16Q8NEE8 873 aa20.2■□□□□ 0.82
CACNA1A-238ENST00000637276 NFXL1Q6ZNB6 911 aa20.19■□□□□ 0.82
CACNA1A-238ENST00000637276 ANKRD62A6NC57 917 aa20.19■□□□□ 0.82
CACNA1A-238ENST00000637276 GOLGA6L19H0YKK7 550 aa20.18■□□□□ 0.82
CACNA1A-238ENST00000637276 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.18■□□□□ 0.82
CACNA1A-238ENST00000637276 CCDC34Q96HJ3 373 aa20.18■□□□□ 0.82
CACNA1A-238ENST00000637276 RCAN3Q9UKA8 241 aa20.17■□□□□ 0.82
CACNA1A-238ENST00000637276 MAP7D2Q96T17 732 aa20.16■□□□□ 0.82
CACNA1A-238ENST00000637276 R3HCC1Q9Y3T6 440 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-238ENST00000637276 AMOTL1Q8IY63 956 aa20.15■□□□□ 0.82
CACNA1A-238ENST00000637276 USP35Q9P2H5 1018 aa20.14■□□□□ 0.82
CACNA1A-238ENST00000637276 BECN2A8MW95 431 aa20.14■□□□□ 0.81
CACNA1A-238ENST00000637276 SYNE3Q6ZMZ3 975 aa20.14■□□□□ 0.81
CACNA1A-238ENST00000637276 IPO8O15397 1037 aaKnown RBP20.13■□□□□ 0.81
CACNA1A-238ENST00000637276 HOMER1Q86YM7 354 aa20.13■□□□□ 0.81
CACNA1A-238ENST00000637276 EPS15P42566 896 aa20.13■□□□□ 0.81
CACNA1A-238ENST00000637276 ATP2B2Q01814 1243 aa20.13■□□□□ 0.81
CACNA1A-238ENST00000637276 RWDD1Q9H446 243 aaPredicted RBP20.12■□□□□ 0.81
CACNA1A-238ENST00000637276 ANO2Q9NQ90 1003 aa20.11■□□□□ 0.81
CACNA1A-238ENST00000637276 HDGFP51858 240 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-238ENST00000637276 BAZ1BQ9UIG0 1483 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-238ENST00000637276 PSMD1Q99460 953 aa20.1■□□□□ 0.81
CACNA1A-238ENST00000637276 CCDC70Q6NSX1 233 aa20.1■□□□□ 0.81
CACNA1A-238ENST00000637276 KANK1Q14678 1352 aa20.1■□□□□ 0.81
CACNA1A-238ENST00000637276 TPM1P09493 284 aa20.09■□□□□ 0.81
CACNA1A-238ENST00000637276 PDILTQ8N807 584 aa20.09■□□□□ 0.81
CACNA1A-238ENST00000637276 RBM33Q96EV2 1170 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-238ENST00000637276 TRIM29Q14134 588 aa20.09■□□□□ 0.81
CACNA1A-238ENST00000637276 KTN1Q86UP2 1357 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-238ENST00000637276 NUTM2GQ5VZR2 741 aa20.08■□□□□ 0.81
CACNA1A-238ENST00000637276 ROCK2O75116 1388 aaKnown RBP20.08■□□□□ 0.81
CACNA1A-238ENST00000637276 ANKRD45Q5TZF3 282 aa20.08■□□□□ 0.81
CACNA1A-238ENST00000637276 GOLGA3Q08378 1498 aa20.07■□□□□ 0.8
CACNA1A-238ENST00000637276 C1orf141Q5JVX7 400 aa20.07■□□□□ 0.8
CACNA1A-238ENST00000637276 ERCC6Q03468 1493 aa20.06■□□□□ 0.8
CACNA1A-238ENST00000637276 AIMP1Q12904 312 aaKnown RBP20.06■□□□□ 0.8
CACNA1A-238ENST00000637276 MAPK8IP2Q13387 824 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-238ENST00000637276 NEFHP12036 1026 aa20.05■□□□□ 0.8
CACNA1A-238ENST00000637276 BRPF1P55201 1214 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-238ENST00000637276 RUFY1Q96T51 708 aa20.05■□□□□ 0.8
CACNA1A-238ENST00000637276 CCNB3Q8WWL7 1395 aa20.05■□□□□ 0.8
CACNA1A-238ENST00000637276 CFAP44Q96MT7 982 aa20.05■□□□□ 0.8
CACNA1A-238ENST00000637276 CSPP1Q1MSJ5 1256 aa20.04■□□□□ 0.8
CACNA1A-238ENST00000637276 PAXIP1Q6ZW49 1069 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-238ENST00000637276 ATP2B1P20020 1258 aa20.03■□□□□ 0.8
CACNA1A-238ENST00000637276 ECM2O94769 699 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms