RNA–Protein interactions for RNA: ENST00000637194.1

SYNGAP1-220, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-220ENST00000637194 ONECUT3O60422 494 aaPredicted RBP4.54□□□□□ -1.68
SYNGAP1-220ENST00000637194 PDIA6Q15084 440 aa4.54□□□□□ -1.68
SYNGAP1-220ENST00000637194 KCTD12Q96CX2 325 aaKnown RBP4.54□□□□□ -1.68
SYNGAP1-220ENST00000637194 E2F4Q16254 413 aa4.53□□□□□ -1.68
SYNGAP1-220ENST00000637194 MRPL50Q8N5N7 158 aaKnown RBP4.53□□□□□ -1.68
SYNGAP1-220ENST00000637194 CFAP44Q96MT7 982 aa4.53□□□□□ -1.68
SYNGAP1-220ENST00000637194 RABGEF1Q9UJ41 708 aa4.53□□□□□ -1.68
SYNGAP1-220ENST00000637194 GOLGA8CPA6NN73 597 aa4.52□□□□□ -1.69
SYNGAP1-220ENST00000637194 COL9A1P20849 921 aa4.52□□□□□ -1.69
SYNGAP1-220ENST00000637194 C6orf132Q5T0Z8 1188 aa4.52□□□□□ -1.69
SYNGAP1-220ENST00000637194 THSD4Q6ZMP0 1018 aa4.52□□□□□ -1.69
SYNGAP1-220ENST00000637194 WDR70Q9NW82 654 aa4.52□□□□□ -1.69
SYNGAP1-220ENST00000637194 PLA2G2EQ9NZK7 142 aa4.52□□□□□ -1.69
SYNGAP1-220ENST00000637194 EN1Q05925 392 aaPredicted RBP4.51□□□□□ -1.69
SYNGAP1-220ENST00000637194 LAPTM4BQ86VI4 370 aa4.51□□□□□ -1.69
SYNGAP1-220ENST00000637194 WNT2BQ93097 391 aa4.51□□□□□ -1.69
SYNGAP1-220ENST00000637194 PROX2Q3B8N5 592 aa4.5□□□□□ -1.69
SYNGAP1-220ENST00000637194 IFFO2Q5TF58 517 aa4.5□□□□□ -1.69
SYNGAP1-220ENST00000637194 DDX12PQ92771 950 aa4.5□□□□□ -1.69
SYNGAP1-220ENST00000637194 TRIM6-TRIM34B2RNG4 842 aa4.49□□□□□ -1.69
SYNGAP1-220ENST00000637194 NBR1Q14596 966 aa4.49□□□□□ -1.69
SYNGAP1-220ENST00000637194 ANKK1Q8NFD2 765 aa4.48□□□□□ -1.69
SYNGAP1-220ENST00000637194 CERKQ8TCT0 537 aa4.48□□□□□ -1.69
SYNGAP1-220ENST00000637194 RBM33Q96EV2 1170 aaKnown RBP4.48□□□□□ -1.69
SYNGAP1-220ENST00000637194 KIAA1468Q9P260 1216 aa4.48□□□□□ -1.69
SYNGAP1-220ENST00000637194 MAP3K7O43318 606 aa4.47□□□□□ -1.69
SYNGAP1-220ENST00000637194 PTPN5P54829 565 aa4.47□□□□□ -1.69
SYNGAP1-220ENST00000637194 NYAP1Q6ZVC0 841 aa4.47□□□□□ -1.69
SYNGAP1-220ENST00000637194 ZFRQ96KR1 1074 aaKnown RBP4.47□□□□□ -1.69
SYNGAP1-220ENST00000637194 SOWAHBA6NEL2 793 aa4.46□□□□□ -1.7
SYNGAP1-220ENST00000637194 FAM98CQ17RN3 349 aaKnown RBP4.46□□□□□ -1.7
SYNGAP1-220ENST00000637194 TSR1Q2NL82 804 aaKnown RBP4.46□□□□□ -1.7
SYNGAP1-220ENST00000637194 PACS2Q86VP3 889 aa4.46□□□□□ -1.7
SYNGAP1-220ENST00000637194 GRXCR2A6NFK2 248 aa4.45□□□□□ -1.7
SYNGAP1-220ENST00000637194 RGS20O76081 388 aa4.45□□□□□ -1.7
SYNGAP1-220ENST00000637194 ARHGEF1Q92888 912 aaKnown RBP4.45□□□□□ -1.7
SYNGAP1-220ENST00000637194 RBM27Q9P2N5 1060 aaKnown RBP4.45□□□□□ -1.7
SYNGAP1-220ENST00000637194 TSKSQ9UJT2 592 aa4.45□□□□□ -1.7
SYNGAP1-220ENST00000637194 OSBPP22059 807 aa4.44□□□□□ -1.7
SYNGAP1-220ENST00000637194 PRIM1P49642 420 aaKnown RBP4.44□□□□□ -1.7
SYNGAP1-220ENST00000637194 PRSS12P56730 875 aa4.44□□□□□ -1.7
SYNGAP1-220ENST00000637194 CDCA7LQ96GN5 454 aa4.44□□□□□ -1.7
SYNGAP1-220ENST00000637194 TSHZ2Q9NRE2 1034 aa4.44□□□□□ -1.7
SYNGAP1-220ENST00000637194 ITGBL1O95965 494 aaPredicted RBP4.43□□□□□ -1.7
SYNGAP1-220ENST00000637194 BCAMP50895 628 aa4.43□□□□□ -1.7
SYNGAP1-220ENST00000637194 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.43□□□□□ -1.7
SYNGAP1-220ENST00000637194 SEPT9Q9UHD8 586 aaPredicted RBP4.43□□□□□ -1.7
SYNGAP1-220ENST00000637194 A0A0G2JS52 829 aa4.42□□□□□ -1.7
SYNGAP1-220ENST00000637194 NBPF26B4DH59 902 aa4.42□□□□□ -1.7
SYNGAP1-220ENST00000637194 LRCH3Q96II8 777 aa4.42□□□□□ -1.7
SYNGAP1-220ENST00000637194 TSR3Q9UJK0 312 aaKnown RBP4.42□□□□□ -1.7
SYNGAP1-220ENST00000637194 P3H3Q8IVL6 736 aa4.41□□□□□ -1.7
SYNGAP1-220ENST00000637194 TTC13Q8NBP0 860 aa4.41□□□□□ -1.7
SYNGAP1-220ENST00000637194 KCNV2Q8TDN2 545 aa4.41□□□□□ -1.7
SYNGAP1-220ENST00000637194 TATDN2Q93075 761 aa4.41□□□□□ -1.7
SYNGAP1-220ENST00000637194 CDHR5Q9HBB8 845 aa4.41□□□□□ -1.7
SYNGAP1-220ENST00000637194 WBP1LQ9NX94 342 aa4.41□□□□□ -1.7
SYNGAP1-220ENST00000637194 FAM198AQ9UFP1 575 aa4.41□□□□□ -1.7
SYNGAP1-220ENST00000637194 HPS5Q9UPZ3 1129 aa4.41□□□□□ -1.7
SYNGAP1-220ENST00000637194 NPDC1Q9NQX5 325 aaPredicted RBP4.39□□□□□ -1.71
SYNGAP1-220ENST00000637194 PNMA3Q9UL41 463 aa4.39□□□□□ -1.71
SYNGAP1-220ENST00000637194 SMAPO00193 183 aa4.38□□□□□ -1.71
SYNGAP1-220ENST00000637194 PPP4CP60510 307 aa4.38□□□□□ -1.71
SYNGAP1-220ENST00000637194 KCNC4Q03721 635 aa4.38□□□□□ -1.71
SYNGAP1-220ENST00000637194 PADI6Q6TGC4 694 aa4.38□□□□□ -1.71
SYNGAP1-220ENST00000637194 SAMD7Q7Z3H4 446 aa4.38□□□□□ -1.71
SYNGAP1-220ENST00000637194 NECTIN2Q92692 538 aa4.38□□□□□ -1.71
SYNGAP1-220ENST00000637194 C3orf80F5H4A9 247 aa4.37□□□□□ -1.71
SYNGAP1-220ENST00000637194 MLLT3P42568 568 aaPredicted RBP4.37□□□□□ -1.71
SYNGAP1-220ENST00000637194 HDGFP51858 240 aaKnown RBP4.37□□□□□ -1.71
SYNGAP1-220ENST00000637194 PLCB2Q00722 1185 aa4.37□□□□□ -1.71
SYNGAP1-220ENST00000637194 NUDT18Q6ZVK8 323 aa4.37□□□□□ -1.71
SYNGAP1-220ENST00000637194 PTGDRQ13258 359 aa4.35□□□□□ -1.71
SYNGAP1-220ENST00000637194 EYA1Q99502 592 aa4.35□□□□□ -1.71
SYNGAP1-220ENST00000637194 SLC4A3P48751 1232 aa4.34□□□□□ -1.71
SYNGAP1-220ENST00000637194 TJAP1Q5JTD0 557 aa4.34□□□□□ -1.71
SYNGAP1-220ENST00000637194 SLF2Q8IX21 1173 aa4.34□□□□□ -1.71
SYNGAP1-220ENST00000637194 IL21Q9HBE4 155 aa4.34□□□□□ -1.71
SYNGAP1-220ENST00000637194 FCHSD2O94868 740 aa4.33□□□□□ -1.72
SYNGAP1-220ENST00000637194 SWT1Q5T5J6 900 aaKnown RBP4.33□□□□□ -1.72
SYNGAP1-220ENST00000637194 PRR14Q9BWN1 585 aa4.33□□□□□ -1.72
SYNGAP1-220ENST00000637194 NUTM2FA1L443 756 aa4.32□□□□□ -1.72
SYNGAP1-220ENST00000637194 SEMA3EO15041 775 aa4.32□□□□□ -1.72
SYNGAP1-220ENST00000637194 APLP1P51693 650 aa4.32□□□□□ -1.72
SYNGAP1-220ENST00000637194 SMYD5Q6GMV2 418 aa4.32□□□□□ -1.72
SYNGAP1-220ENST00000637194 RBM46Q8TBY0 533 aaKnown RBP4.32□□□□□ -1.72
SYNGAP1-220ENST00000637194 MTRQ99707 1265 aa4.32□□□□□ -1.72
SYNGAP1-220ENST00000637194 IRX2Q9BZI1 471 aaPredicted RBP4.32□□□□□ -1.72
SYNGAP1-220ENST00000637194 ADGRG1Q9Y653 693 aa4.32□□□□□ -1.72
SYNGAP1-220ENST00000637194 TESPA1A2RU30 521 aaPredicted RBP4.31□□□□□ -1.72
SYNGAP1-220ENST00000637194 RNF40O75150 1001 aa4.31□□□□□ -1.72
SYNGAP1-220ENST00000637194 DNAJB2P25686 324 aa4.31□□□□□ -1.72
SYNGAP1-220ENST00000637194 TMEM134Q9H6X4 195 aa4.3□□□□□ -1.72
SYNGAP1-220ENST00000637194 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.29□□□□□ -1.72
SYNGAP1-220ENST00000637194 RCCD1A6NED2 376 aa4.29□□□□□ -1.72
SYNGAP1-220ENST00000637194 OATP04181 439 aa4.29□□□□□ -1.72
SYNGAP1-220ENST00000637194 HIC1Q14526 733 aa4.29□□□□□ -1.72
SYNGAP1-220ENST00000637194 ZNF516Q92618 1163 aa4.28□□□□□ -1.72
SYNGAP1-220ENST00000637194 GGCXP38435 758 aa4.27□□□□□ -1.73
SYNGAP1-220ENST00000637194 HAP1P54257 671 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms