RNA–Protein interactions for RNA: ENST00000637103.1

SMARCA2-258, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-258ENST00000637103 HDGFL2Q7Z4V5 671 aaPredicted RBP13.95□□□□□ -0.18
SMARCA2-258ENST00000637103 HDAC5Q9UQL6 1122 aa13.95□□□□□ -0.18
SMARCA2-258ENST00000637103 CARMIL1Q5VZK9 1371 aa13.94□□□□□ -0.18
SMARCA2-258ENST00000637103 ANO8Q9HCE9 1232 aaPredicted RBP13.94□□□□□ -0.18
SMARCA2-258ENST00000637103 CLUAP1Q96AJ1 413 aa13.94□□□□□ -0.18
SMARCA2-258ENST00000637103 CCDC39Q9UFE4 941 aa13.93□□□□□ -0.18
SMARCA2-258ENST00000637103 NOL8Q76FK4 1167 aaKnown RBP13.93□□□□□ -0.18
SMARCA2-258ENST00000637103 L3MBTL2Q969R5 705 aa13.93□□□□□ -0.18
SMARCA2-258ENST00000637103 E9PSI1 815 aa13.93□□□□□ -0.18
SMARCA2-258ENST00000637103 PRKCSHP14314 528 aaPredicted RBP13.92□□□□□ -0.18
SMARCA2-258ENST00000637103 CCDC70Q6NSX1 233 aa13.92□□□□□ -0.18
SMARCA2-258ENST00000637103 CHMP4CQ96CF2 233 aa13.92□□□□□ -0.18
SMARCA2-258ENST00000637103 BECN2A8MW95 431 aa13.92□□□□□ -0.18
SMARCA2-258ENST00000637103 DIAPH3Q9NSV4 1193 aa13.92□□□□□ -0.18
SMARCA2-258ENST00000637103 PLEKHG5O94827 1062 aa13.92□□□□□ -0.18
SMARCA2-258ENST00000637103 FOXD4L5Q5VV16 416 aaPredicted RBP13.92□□□□□ -0.18
SMARCA2-258ENST00000637103 FOXD4L4Q8WXT5 416 aaPredicted RBP13.92□□□□□ -0.18
SMARCA2-258ENST00000637103 FOXD1Q16676 465 aa13.92□□□□□ -0.18
SMARCA2-258ENST00000637103 STK31Q9BXU1 1019 aa13.91□□□□□ -0.18
SMARCA2-258ENST00000637103 CCDC66A2RUB6 948 aa13.91□□□□□ -0.18
SMARCA2-258ENST00000637103 NUCB2P80303 420 aa13.91□□□□□ -0.18
SMARCA2-258ENST00000637103 CCDC146Q8IYE0 955 aa13.91□□□□□ -0.18
SMARCA2-258ENST00000637103 ARGLU1Q9NWB6 273 aaPredicted RBP13.9□□□□□ -0.18
SMARCA2-258ENST00000637103 ZNF592Q92610 1267 aa13.9□□□□□ -0.18
SMARCA2-258ENST00000637103 R3HCC1Q9Y3T6 440 aaKnown RBP13.9□□□□□ -0.18
SMARCA2-258ENST00000637103 LMOD3Q0VAK6 560 aa13.89□□□□□ -0.19
SMARCA2-258ENST00000637103 PLIN1O60240 522 aa13.89□□□□□ -0.19
SMARCA2-258ENST00000637103 SF3A1Q15459 793 aaKnown RBP13.89□□□□□ -0.19
SMARCA2-258ENST00000637103 ZKSCAN2Q63HK3 967 aa13.89□□□□□ -0.19
SMARCA2-258ENST00000637103 CCAR2Q8N163 923 aaKnown RBP13.88□□□□□ -0.19
SMARCA2-258ENST00000637103 CALRP27797 417 aaKnown RBP13.88□□□□□ -0.19
SMARCA2-258ENST00000637103 TPM1P09493 284 aa13.88□□□□□ -0.19
SMARCA2-258ENST00000637103 NASPP49321 788 aaPredicted RBP13.87□□□□□ -0.19
SMARCA2-258ENST00000637103 AAMPQ13685 434 aa13.87□□□□□ -0.19
SMARCA2-258ENST00000637103 NGEFQ8N5V2 710 aa13.87□□□□□ -0.19
SMARCA2-258ENST00000637103 ANKRD30AQ9BXX3 1397 aa13.87□□□□□ -0.19
SMARCA2-258ENST00000637103 BRPF3Q9ULD4 1205 aa13.87□□□□□ -0.19
SMARCA2-258ENST00000637103 SPAG9O60271 1321 aaKnown RBP13.87□□□□□ -0.19
SMARCA2-258ENST00000637103 REC8O95072 547 aa13.87□□□□□ -0.19
SMARCA2-258ENST00000637103 H3BQV1 296 aa13.87□□□□□ -0.19
SMARCA2-258ENST00000637103 IFFO2Q5TF58 517 aa13.87□□□□□ -0.19
SMARCA2-258ENST00000637103 CWC15Q9P013 229 aaKnown RBP13.87□□□□□ -0.19
SMARCA2-258ENST00000637103 CUX2O14529 1486 aa13.86□□□□□ -0.19
SMARCA2-258ENST00000637103 TSR1Q2NL82 804 aaKnown RBP13.86□□□□□ -0.19
SMARCA2-258ENST00000637103 ANKRD45Q5TZF3 282 aa13.86□□□□□ -0.19
SMARCA2-258ENST00000637103 ACBD3Q9H3P7 528 aa13.86□□□□□ -0.19
SMARCA2-258ENST00000637103 IL27Q8NEV9 243 aa13.86□□□□□ -0.19
SMARCA2-258ENST00000637103 NUP155O75694 1391 aa13.86□□□□□ -0.19
SMARCA2-258ENST00000637103 CLSTN1O94985 981 aa13.86□□□□□ -0.19
SMARCA2-258ENST00000637103 RRP9O43818 475 aaKnown RBP13.85□□□□□ -0.19
SMARCA2-258ENST00000637103 CCDC173Q0VFZ6 552 aa13.85□□□□□ -0.19
SMARCA2-258ENST00000637103 NACADO15069 1562 aa13.85□□□□□ -0.19
SMARCA2-258ENST00000637103 ISY1Q9ULR0 285 aaKnown RBP13.84□□□□□ -0.19
SMARCA2-258ENST00000637103 HMGN5P82970 282 aaKnown RBP13.84□□□□□ -0.19
SMARCA2-258ENST00000637103 EIF4G1Q04637 1599 aaKnown RBP13.84□□□□□ -0.19
SMARCA2-258ENST00000637103 DDX19BQ9UMR2 479 aa13.83□□□□□ -0.2
SMARCA2-258ENST00000637103 FAM184AQ8NB25 1140 aa13.83□□□□□ -0.2
SMARCA2-258ENST00000637103 PODXL2Q9NZ53 605 aa13.83□□□□□ -0.2
SMARCA2-258ENST00000637103 HOMER1Q86YM7 354 aa13.82□□□□□ -0.2
SMARCA2-258ENST00000637103 COG6Q9Y2V7 657 aa13.82□□□□□ -0.2
SMARCA2-258ENST00000637103 CCDC88BA6NC98 1476 aa13.82□□□□□ -0.2
SMARCA2-258ENST00000637103 TRAK2O60296 914 aa13.82□□□□□ -0.2
SMARCA2-258ENST00000637103 C22orf23Q9BZE7 217 aa13.82□□□□□ -0.2
SMARCA2-258ENST00000637103 HDGFP51858 240 aaKnown RBP13.82□□□□□ -0.2
SMARCA2-258ENST00000637103 TPD52L1Q16890 204 aaPredicted RBP13.82□□□□□ -0.2
SMARCA2-258ENST00000637103 ABCC8Q09428 1581 aa13.82□□□□□ -0.2
SMARCA2-258ENST00000637103 MCTP1Q6DN14 999 aa13.81□□□□□ -0.2
SMARCA2-258ENST00000637103 IFT57Q9NWB7 429 aa13.81□□□□□ -0.2
SMARCA2-258ENST00000637103 MNS1Q8NEH6 495 aa13.81□□□□□ -0.2
SMARCA2-258ENST00000637103 RASSF8Q8NHQ8 419 aa13.81□□□□□ -0.2
SMARCA2-258ENST00000637103 CREBRFQ8IUR6 639 aa13.8□□□□□ -0.2
SMARCA2-258ENST00000637103 LETM1O95202 739 aaPredicted RBP13.79□□□□□ -0.2
SMARCA2-258ENST00000637103 SLC4A10Q6U841 1118 aa13.79□□□□□ -0.2
SMARCA2-258ENST00000637103 AK7Q96M32 723 aa13.79□□□□□ -0.2
SMARCA2-258ENST00000637103 TERF2IPQ9NYB0 399 aa13.79□□□□□ -0.2
SMARCA2-258ENST00000637103 NPHP1O15259 732 aa13.79□□□□□ -0.2
SMARCA2-258ENST00000637103 RILPL2Q969X0 211 aa13.79□□□□□ -0.2
SMARCA2-258ENST00000637103 HSP90B2PQ58FF3 399 aa13.79□□□□□ -0.2
SMARCA2-258ENST00000637103 CEP89Q96ST8 783 aa13.79□□□□□ -0.2
SMARCA2-258ENST00000637103 SASS6Q6UVJ0 657 aa13.78□□□□□ -0.2
SMARCA2-258ENST00000637103 CNTLNQ9NXG0 1405 aa13.78□□□□□ -0.2
SMARCA2-258ENST00000637103 GORABQ5T7V8 394 aa13.78□□□□□ -0.2
SMARCA2-258ENST00000637103 PANK3Q9H999 370 aa13.78□□□□□ -0.2
SMARCA2-258ENST00000637103 FOXD4L6Q3SYB3 417 aaPredicted RBP13.78□□□□□ -0.2
SMARCA2-258ENST00000637103 FOXD4L3Q6VB84 417 aaPredicted RBP13.78□□□□□ -0.2
SMARCA2-258ENST00000637103 LMOD2Q6P5Q4 547 aa13.78□□□□□ -0.2
SMARCA2-258ENST00000637103 SAFB2Q14151 953 aaKnown RBP eCLIP13.77□□□□□ -0.2
SMARCA2-258ENST00000637103 RUFY2Q8WXA3 655 aa13.77□□□□□ -0.2
SMARCA2-258ENST00000637103 INTS3Q68E01 1043 aaKnown RBP13.77□□□□□ -0.2
SMARCA2-258ENST00000637103 APPP05067 770 aa13.77□□□□□ -0.21
SMARCA2-258ENST00000637103 USP47Q96K76 1375 aa13.77□□□□□ -0.21
SMARCA2-258ENST00000637103 IPO7O95373 1038 aaKnown RBP13.77□□□□□ -0.21
SMARCA2-258ENST00000637103 MBD3O95983 291 aa13.77□□□□□ -0.21
SMARCA2-258ENST00000637103 CDR1P51861 262 aa13.76□□□□□ -0.21
SMARCA2-258ENST00000637103 FRAT2O75474 233 aaPredicted RBP13.76□□□□□ -0.21
SMARCA2-258ENST00000637103 DZIP1LQ8IYY4 767 aaKnown RBP13.76□□□□□ -0.21
SMARCA2-258ENST00000637103 ST20-MTHFSA0A0A6YYL1 179 aa13.75□□□□□ -0.21
SMARCA2-258ENST00000637103 BICD2Q8TD16 824 aa13.75□□□□□ -0.21
SMARCA2-258ENST00000637103 SOX12O15370 315 aa13.75□□□□□ -0.21
SMARCA2-258ENST00000637103 ROCK1Q13464 1354 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms