RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-223ENST00000637033 TROQ12816 1431 aaPredicted RBP17.25■□□□□ 0.35
CHRNA7-223ENST00000637033 BACH2Q9BYV9 841 aa17.24■□□□□ 0.35
CHRNA7-223ENST00000637033 ADAMTS8Q9UP79 889 aa17.23■□□□□ 0.35
CHRNA7-223ENST00000637033 CCDC146Q8IYE0 955 aa17.23■□□□□ 0.35
CHRNA7-223ENST00000637033 KIF14Q15058 1648 aa17.23■□□□□ 0.35
CHRNA7-223ENST00000637033 TCERG1O14776 1098 aaKnown RBP17.23■□□□□ 0.35
CHRNA7-223ENST00000637033 BRD4O60885 1362 aaPredicted RBP17.22■□□□□ 0.35
CHRNA7-223ENST00000637033 ADAMTS12P58397 1594 aa17.21■□□□□ 0.35
CHRNA7-223ENST00000637033 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.21■□□□□ 0.34
CHRNA7-223ENST00000637033 LRPPRCP42704 1394 aaKnown RBP17.2■□□□□ 0.34
CHRNA7-223ENST00000637033 MBD5Q9P267 1494 aa17.2■□□□□ 0.34
CHRNA7-223ENST00000637033 C9orf84Q5VXU9 1444 aa17.2■□□□□ 0.34
CHRNA7-223ENST00000637033 PER1O15534 1290 aaPredicted RBP17.2■□□□□ 0.34
CHRNA7-223ENST00000637033 KDM5CP41229 1560 aa17.2■□□□□ 0.34
CHRNA7-223ENST00000637033 KIAA0586Q9BVV6 1533 aa17.19■□□□□ 0.34
CHRNA7-223ENST00000637033 PBRM1Q86U86 1689 aa17.19■□□□□ 0.34
CHRNA7-223ENST00000637033 DISP3Q9P2K9 1392 aa17.19■□□□□ 0.34
CHRNA7-223ENST00000637033 KIAA0556O60303 1618 aa17.17■□□□□ 0.34
CHRNA7-223ENST00000637033 RAPGEF6Q8TEU7 1601 aa17.17■□□□□ 0.34
CHRNA7-223ENST00000637033 SENP3Q9H4L4 574 aaPredicted RBP17.17■□□□□ 0.34
CHRNA7-223ENST00000637033 DAXXQ9UER7 740 aaPredicted RBP17.16■□□□□ 0.34
CHRNA7-223ENST00000637033 ARID4BQ4LE39 1312 aaPredicted RBP17.16■□□□□ 0.34
CHRNA7-223ENST00000637033 RALGAPBQ86X10 1494 aa17.14■□□□□ 0.33
CHRNA7-223ENST00000637033 WDR43Q15061 677 aaKnown RBP eCLIP17.14■□□□□ 0.33
CHRNA7-223ENST00000637033 BRPF3Q9ULD4 1205 aa17.13■□□□□ 0.33
CHRNA7-223ENST00000637033 CCDC144AA2RUR9 1427 aa17.13■□□□□ 0.33
CHRNA7-223ENST00000637033 GRIN2AQ12879 1464 aa17.12■□□□□ 0.33
CHRNA7-223ENST00000637033 NEUROD2Q15784 382 aa17.12■□□□□ 0.33
CHRNA7-223ENST00000637033 TESK2Q96S53 571 aa17.12■□□□□ 0.33
CHRNA7-223ENST00000637033 TNNT2P45379 298 aaPredicted RBP17.11■□□□□ 0.33
CHRNA7-223ENST00000637033 KNSTRNQ9Y448 316 aa17.11■□□□□ 0.33
CHRNA7-223ENST00000637033 TMF1P82094 1093 aa17.1■□□□□ 0.33
CHRNA7-223ENST00000637033 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
CHRNA7-223ENST00000637033 PARD3Q8TEW0 1356 aa17.1■□□□□ 0.33
CHRNA7-223ENST00000637033 PDE3BQ13370 1112 aa17.09■□□□□ 0.33
CHRNA7-223ENST00000637033 ARXQ96QS3 562 aa17.09■□□□□ 0.33
CHRNA7-223ENST00000637033 BCAR3O75815 825 aa17.08■□□□□ 0.33
CHRNA7-223ENST00000637033 SPINK5Q9NQ38 1064 aaPredicted RBP17.08■□□□□ 0.33
CHRNA7-223ENST00000637033 UHRF1BP1Q6BDS2 1440 aa17.08■□□□□ 0.32
CHRNA7-223ENST00000637033 NFKBIBQ15653 356 aa17.07■□□□□ 0.32
CHRNA7-223ENST00000637033 APAF1O14727 1248 aa17.06■□□□□ 0.32
CHRNA7-223ENST00000637033 PLEKHH1Q9ULM0 1364 aa17.06■□□□□ 0.32
CHRNA7-223ENST00000637033 PPP2R1AP30153 589 aa17.05■□□□□ 0.32
CHRNA7-223ENST00000637033 POLR1AO95602 1720 aaPredicted RBP17.05■□□□□ 0.32
CHRNA7-223ENST00000637033 CARMIL2Q6F5E8 1435 aa17.05■□□□□ 0.32
CHRNA7-223ENST00000637033 ATP10BO94823 1461 aa17.05■□□□□ 0.32
CHRNA7-223ENST00000637033 MS4A1P11836 297 aa17.04■□□□□ 0.32
CHRNA7-223ENST00000637033 PRAG1Q86YV5 1406 aa17.04■□□□□ 0.32
CHRNA7-223ENST00000637033 MAGI1Q96QZ7 1491 aaPredicted RBP17.03■□□□□ 0.32
CHRNA7-223ENST00000637033 DUSP27Q5VZP5 1158 aa17.03■□□□□ 0.32
CHRNA7-223ENST00000637033 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
CHRNA7-223ENST00000637033 ADGRL2O95490 1459 aa17.03■□□□□ 0.32
CHRNA7-223ENST00000637033 PPM1GO15355 546 aaPredicted RBP17.02■□□□□ 0.32
CHRNA7-223ENST00000637033 FRAT2O75474 233 aaPredicted RBP17.02■□□□□ 0.32
CHRNA7-223ENST00000637033 FRAT1Q92837 279 aaPredicted RBP17.02■□□□□ 0.32
CHRNA7-223ENST00000637033 RRP7AQ9Y3A4 280 aaKnown RBP17.02■□□□□ 0.32
CHRNA7-223ENST00000637033 GOLGA2Q08379 1002 aa17.02■□□□□ 0.32
CHRNA7-223ENST00000637033 ERCC6Q03468 1493 aa17.02■□□□□ 0.31
CHRNA7-223ENST00000637033 IFT140Q96RY7 1462 aa17.02■□□□□ 0.31
CHRNA7-223ENST00000637033 ERBINQ96RT1 1412 aa17.01■□□□□ 0.31
CHRNA7-223ENST00000637033 BCL2L13Q9BXK5 485 aa17■□□□□ 0.31
CHRNA7-223ENST00000637033 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
CHRNA7-223ENST00000637033 SPRYD3Q8NCJ5 442 aa16.98■□□□□ 0.31
CHRNA7-223ENST00000637033 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
CHRNA7-223ENST00000637033 PLEKHH2Q8IVE3 1493 aa16.98■□□□□ 0.31
CHRNA7-223ENST00000637033 FAM135AQ9P2D6 1515 aa16.98■□□□□ 0.31
CHRNA7-223ENST00000637033 GSE1Q14687 1217 aa16.98■□□□□ 0.31
CHRNA7-223ENST00000637033 C8orf34Q49A92 452 aa16.98■□□□□ 0.31
CHRNA7-223ENST00000637033 PANK1Q8TE04 598 aa16.98■□□□□ 0.31
CHRNA7-223ENST00000637033 DDRGK1Q96HY6 314 aa16.98■□□□□ 0.31
CHRNA7-223ENST00000637033 SLKQ9H2G2 1235 aaPredicted RBP16.98■□□□□ 0.31
CHRNA7-223ENST00000637033 A2MP01023 1474 aa16.97■□□□□ 0.31
CHRNA7-223ENST00000637033 COG6Q9Y2V7 657 aa16.97■□□□□ 0.31
CHRNA7-223ENST00000637033 PLA2R1Q13018 1463 aa16.97■□□□□ 0.31
CHRNA7-223ENST00000637033 IGHDP01880 384 aa16.96■□□□□ 0.31
CHRNA7-223ENST00000637033 ADGBQ8N7X0 1667 aa16.96■□□□□ 0.31
CHRNA7-223ENST00000637033 EIF5BO60841 1220 aaKnown RBP16.96■□□□□ 0.31
CHRNA7-223ENST00000637033 FAM161AQ3B820 660 aa16.96■□□□□ 0.31
CHRNA7-223ENST00000637033 EIF4G3O43432 1585 aaKnown RBP16.95■□□□□ 0.3
CHRNA7-223ENST00000637033 SEC24BO95487 1268 aa16.95■□□□□ 0.3
CHRNA7-223ENST00000637033 CHGAP10645 457 aaKnown RBP16.95■□□□□ 0.3
CHRNA7-223ENST00000637033 CENPQQ7L2Z9 268 aaPredicted RBP16.95■□□□□ 0.3
CHRNA7-223ENST00000637033 CLUAP1Q96AJ1 413 aa16.95■□□□□ 0.3
CHRNA7-223ENST00000637033 PTPRGP23470 1445 aa16.95■□□□□ 0.3
CHRNA7-223ENST00000637033 ITSN2Q9NZM3 1697 aa16.95■□□□□ 0.3
CHRNA7-223ENST00000637033 KDM2BQ8NHM5 1336 aa16.94■□□□□ 0.3
CHRNA7-223ENST00000637033 AMER1Q5JTC6 1135 aaPredicted RBP16.94■□□□□ 0.3
CHRNA7-223ENST00000637033 AFAP1Q8N556 730 aa16.94■□□□□ 0.3
CHRNA7-223ENST00000637033 TNNQ9UQP3 1299 aa16.94■□□□□ 0.3
CHRNA7-223ENST00000637033 ABCC10Q5T3U5 1492 aa16.93■□□□□ 0.3
CHRNA7-223ENST00000637033 ARHGEF12Q9NZN5 1544 aa16.93■□□□□ 0.3
CHRNA7-223ENST00000637033 KDM5DQ9BY66 1539 aa16.92■□□□□ 0.3
CHRNA7-223ENST00000637033 MAGI2Q86UL8 1455 aa16.92■□□□□ 0.3
CHRNA7-223ENST00000637033 USP35Q9P2H5 1018 aa16.92■□□□□ 0.3
CHRNA7-223ENST00000637033 SLFN5Q08AF3 891 aa16.91■□□□□ 0.3
CHRNA7-223ENST00000637033 CFAP70Q5T0N1 1121 aa16.91■□□□□ 0.3
CHRNA7-223ENST00000637033 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.91■□□□□ 0.3
CHRNA7-223ENST00000637033 CDC42BPAQ5VT25 1732 aa16.91■□□□□ 0.3
CHRNA7-223ENST00000637033 COL17A1Q9UMD9 1497 aaPredicted RBP16.91■□□□□ 0.3
CHRNA7-223ENST00000637033 SYNJ2O15056 1496 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms