RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 CEP170Q5SW79 1584 aa10.15□□□□□ -0.78
CACNA1D-220ENST00000636999 PLEKHG5O94827 1062 aa10.15□□□□□ -0.78
CACNA1D-220ENST00000636999 HAP1P54257 671 aaPredicted RBP10.15□□□□□ -0.78
CACNA1D-220ENST00000636999 PPM1GO15355 546 aaPredicted RBP10.15□□□□□ -0.79
CACNA1D-220ENST00000636999 LMOD2Q6P5Q4 547 aa10.15□□□□□ -0.79
CACNA1D-220ENST00000636999 HDGFL2Q7Z4V5 671 aaPredicted RBP10.15□□□□□ -0.79
CACNA1D-220ENST00000636999 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.15□□□□□ -0.79
CACNA1D-220ENST00000636999 TRAK1Q9UPV9 953 aa10.15□□□□□ -0.79
CACNA1D-220ENST00000636999 ZBTB7CA1YPR0 619 aa10.14□□□□□ -0.79
CACNA1D-220ENST00000636999 CC2D1BQ5T0F9 858 aaKnown RBP10.14□□□□□ -0.79
CACNA1D-220ENST00000636999 PLCH2O75038 1416 aa10.14□□□□□ -0.79
CACNA1D-220ENST00000636999 ZBTB47Q9UFB7 747 aaPredicted RBP10.14□□□□□ -0.79
CACNA1D-220ENST00000636999 WDR7Q9Y4E6 1490 aa10.14□□□□□ -0.79
CACNA1D-220ENST00000636999 AKNAQ7Z591 1439 aa10.14□□□□□ -0.79
CACNA1D-220ENST00000636999 KIAA1107Q9UPP5 1409 aa10.14□□□□□ -0.79
CACNA1D-220ENST00000636999 NUDCQ9Y266 331 aa10.14□□□□□ -0.79
CACNA1D-220ENST00000636999 NCOA1Q15788 1441 aa10.13□□□□□ -0.79
CACNA1D-220ENST00000636999 ABCC2Q92887 1545 aa10.13□□□□□ -0.79
CACNA1D-220ENST00000636999 ST20-MTHFSA0A0A6YYL1 179 aa10.13□□□□□ -0.79
CACNA1D-220ENST00000636999 DENND4BO75064 1496 aaPredicted RBP10.13□□□□□ -0.79
CACNA1D-220ENST00000636999 POGZQ7Z3K3 1410 aa10.13□□□□□ -0.79
CACNA1D-220ENST00000636999 SLC52A1Q9NWF4 448 aa10.12□□□□□ -0.79
CACNA1D-220ENST00000636999 SAMD9Q5K651 1589 aa10.11□□□□□ -0.79
CACNA1D-220ENST00000636999 TNNT2P45379 298 aaPredicted RBP10.11□□□□□ -0.79
CACNA1D-220ENST00000636999 MORC1Q86VD1 984 aa10.11□□□□□ -0.79
CACNA1D-220ENST00000636999 BCL11AQ9H165 835 aa10.11□□□□□ -0.79
CACNA1D-220ENST00000636999 TERF2IPQ9NYB0 399 aa10.1□□□□□ -0.79
CACNA1D-220ENST00000636999 USP47Q96K76 1375 aa10.1□□□□□ -0.79
CACNA1D-220ENST00000636999 KTN1Q86UP2 1357 aaKnown RBP10.09□□□□□ -0.79
CACNA1D-220ENST00000636999 AEBP2Q6ZN18 517 aaPredicted RBP10.09□□□□□ -0.79
CACNA1D-220ENST00000636999 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.09□□□□□ -0.79
CACNA1D-220ENST00000636999 TEX14Q8IWB6 1497 aa10.08□□□□□ -0.8
CACNA1D-220ENST00000636999 ITSN2Q9NZM3 1697 aa10.08□□□□□ -0.8
CACNA1D-220ENST00000636999 RALBP1Q15311 655 aa10.07□□□□□ -0.8
CACNA1D-220ENST00000636999 MAPK8IP3Q9UPT6 1336 aa10.07□□□□□ -0.8
CACNA1D-220ENST00000636999 EVC2Q86UK5 1308 aa10.07□□□□□ -0.8
CACNA1D-220ENST00000636999 DHX29Q7Z478 1369 aaKnown RBP10.07□□□□□ -0.8
CACNA1D-220ENST00000636999 PNNQ9H307 717 aaKnown RBP10.06□□□□□ -0.8
CACNA1D-220ENST00000636999 CFAP43Q8NDM7 1665 aa10.06□□□□□ -0.8
CACNA1D-220ENST00000636999 THEMISQ8N1K5 641 aaPredicted RBP10.06□□□□□ -0.8
CACNA1D-220ENST00000636999 PPP6R1Q9UPN7 881 aa10.06□□□□□ -0.8
CACNA1D-220ENST00000636999 U2SURPO15042 1029 aaKnown RBP10.05□□□□□ -0.8
CACNA1D-220ENST00000636999 NGDNQ8NEJ9 315 aaKnown RBP10.05□□□□□ -0.8
CACNA1D-220ENST00000636999 CENPJQ9HC77 1338 aaPredicted RBP10.04□□□□□ -0.8
CACNA1D-220ENST00000636999 RPGRIP1LQ68CZ1 1315 aa10.04□□□□□ -0.8
CACNA1D-220ENST00000636999 ZNF518AQ6AHZ1 1483 aa10.04□□□□□ -0.8
CACNA1D-220ENST00000636999 PAK3O75914 559 aaPredicted RBP10.04□□□□□ -0.8
CACNA1D-220ENST00000636999 TXNDC2Q86VQ3 553 aa10.04□□□□□ -0.8
CACNA1D-220ENST00000636999 SOX12O15370 315 aa10.03□□□□□ -0.8
CACNA1D-220ENST00000636999 CFAP70Q5T0N1 1121 aa10.03□□□□□ -0.8
CACNA1D-220ENST00000636999 CHD1O14646 1710 aa10.03□□□□□ -0.8
CACNA1D-220ENST00000636999 MINK1Q8N4C8 1332 aaPredicted RBP10.03□□□□□ -0.8
CACNA1D-220ENST00000636999 NEUROD2Q15784 382 aa10.03□□□□□ -0.8
CACNA1D-220ENST00000636999 TCOF1Q13428 1488 aaKnown RBP10.02□□□□□ -0.8
CACNA1D-220ENST00000636999 SYCP2Q9BX26 1530 aa10.02□□□□□ -0.8
CACNA1D-220ENST00000636999 ANKRD30BQ9BXX2 1392 aa10.02□□□□□ -0.8
CACNA1D-220ENST00000636999 PRKRIP1Q9H875 184 aaPredicted RBP10.02□□□□□ -0.81
CACNA1D-220ENST00000636999 NUTM2FA1L443 756 aa10.02□□□□□ -0.81
CACNA1D-220ENST00000636999 TMEM132EQ6IEE7 984 aa10.01□□□□□ -0.81
CACNA1D-220ENST00000636999 PANK3Q9H999 370 aa10.01□□□□□ -0.81
CACNA1D-220ENST00000636999 PTPRKQ15262 1439 aa10.01□□□□□ -0.81
CACNA1D-220ENST00000636999 ABCC10Q5T3U5 1492 aa10.01□□□□□ -0.81
CACNA1D-220ENST00000636999 TRAPPC8Q9Y2L5 1435 aa10.01□□□□□ -0.81
CACNA1D-220ENST00000636999 UHRF1BP1LA0JNW5 1464 aa10.01□□□□□ -0.81
CACNA1D-220ENST00000636999 NLRP13Q86W25 1043 aa10□□□□□ -0.81
CACNA1D-220ENST00000636999 A0A0G2JS52 829 aa10□□□□□ -0.81
CACNA1D-220ENST00000636999 NOP58Q9Y2X3 529 aaKnown RBP10□□□□□ -0.81
CACNA1D-220ENST00000636999 ERBINQ96RT1 1412 aa9.99□□□□□ -0.81
CACNA1D-220ENST00000636999 ABCA8O94911 1581 aa9.99□□□□□ -0.81
CACNA1D-220ENST00000636999 DUOX2Q9NRD8 1548 aa9.99□□□□□ -0.81
CACNA1D-220ENST00000636999 A2MP01023 1474 aa9.99□□□□□ -0.81
CACNA1D-220ENST00000636999 NBPF8Q3BBV2 869 aa9.99□□□□□ -0.81
CACNA1D-220ENST00000636999 NBPF1Q3BBV0 1214 aa9.98□□□□□ -0.81
CACNA1D-220ENST00000636999 ERICH6BQ5W0A0 696 aa9.98□□□□□ -0.81
CACNA1D-220ENST00000636999 KDM5BQ9UGL1 1544 aa9.98□□□□□ -0.81
CACNA1D-220ENST00000636999 CGNL1Q0VF96 1302 aa9.98□□□□□ -0.81
CACNA1D-220ENST00000636999 RTEL1-TNFRSF6BF6WH68 1400 aa9.97□□□□□ -0.81
CACNA1D-220ENST00000636999 SHANK2Q9UPX8 1470 aa9.97□□□□□ -0.81
CACNA1D-220ENST00000636999 WASHC2AQ641Q2 1341 aa9.97□□□□□ -0.81
CACNA1D-220ENST00000636999 ANKLE2Q86XL3 938 aa9.97□□□□□ -0.81
CACNA1D-220ENST00000636999 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.97□□□□□ -0.81
CACNA1D-220ENST00000636999 LAS1LQ9Y4W2 734 aaKnown RBP9.97□□□□□ -0.81
CACNA1D-220ENST00000636999 U2AF1L5P0DN76 240 aaPredicted RBP9.96□□□□□ -0.81
CACNA1D-220ENST00000636999 U2AF1Q01081 240 aaKnown RBP eCLIP9.96□□□□□ -0.81
CACNA1D-220ENST00000636999 CCDC7Q96M83 1385 aa9.96□□□□□ -0.81
CACNA1D-220ENST00000636999 IDI1Q13907 227 aa9.96□□□□□ -0.82
CACNA1D-220ENST00000636999 KIF7Q2M1P5 1343 aa9.96□□□□□ -0.82
CACNA1D-220ENST00000636999 RGS3P49796 1198 aa9.95□□□□□ -0.82
CACNA1D-220ENST00000636999 UPF2Q9HAU5 1272 aaKnown RBP9.95□□□□□ -0.82
CACNA1D-220ENST00000636999 FBXO31Q5XUX0 539 aaPredicted RBP9.95□□□□□ -0.82
CACNA1D-220ENST00000636999 MYBBP1AQ9BQG0 1328 aaKnown RBP9.94□□□□□ -0.82
CACNA1D-220ENST00000636999 COG3Q96JB2 828 aa9.94□□□□□ -0.82
CACNA1D-220ENST00000636999 RCAN3Q9UKA8 241 aa9.94□□□□□ -0.82
CACNA1D-220ENST00000636999 PRAM1Q96QH2 718 aa9.93□□□□□ -0.82
CACNA1D-220ENST00000636999 MAGI3Q5TCQ9 1506 aa9.93□□□□□ -0.82
CACNA1D-220ENST00000636999 RPRD2Q5VT52 1461 aaKnown RBP9.93□□□□□ -0.82
CACNA1D-220ENST00000636999 NEO1Q92859 1461 aa9.93□□□□□ -0.82
CACNA1D-220ENST00000636999 AMPHP49418 695 aa9.93□□□□□ -0.82
CACNA1D-220ENST00000636999 ZBED9Q6R2W3 1325 aa9.92□□□□□ -0.82
CACNA1D-220ENST00000636999 ARXQ96QS3 562 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms