RNA–Protein interactions for RNA: ENST00000636974.1

CACNA1A-233, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-233ENST00000636974 PODXL2Q9NZ53 605 aa11.14□□□□□ -0.63
CACNA1A-233ENST00000636974 SAMD9LQ8IVG5 1584 aa11.13□□□□□ -0.63
CACNA1A-233ENST00000636974 PRKRIP1Q9H875 184 aaPredicted RBP11.13□□□□□ -0.63
CACNA1A-233ENST00000636974 C14orf37Q86TY3 774 aa11.12□□□□□ -0.63
CACNA1A-233ENST00000636974 KIF7Q2M1P5 1343 aa11.11□□□□□ -0.63
CACNA1A-233ENST00000636974 UHRF1BP1LA0JNW5 1464 aa11.11□□□□□ -0.63
CACNA1A-233ENST00000636974 CHD1O14646 1710 aa11.11□□□□□ -0.63
CACNA1A-233ENST00000636974 PLXNC1O60486 1568 aa11.11□□□□□ -0.63
CACNA1A-233ENST00000636974 ERICH6BQ5W0A0 696 aa11.11□□□□□ -0.63
CACNA1A-233ENST00000636974 USP47Q96K76 1375 aa11.11□□□□□ -0.63
CACNA1A-233ENST00000636974 CDC42BPBQ9Y5S2 1711 aa11.1□□□□□ -0.63
CACNA1A-233ENST00000636974 UNC13BO14795 1591 aa11.1□□□□□ -0.63
CACNA1A-233ENST00000636974 KDM5CP41229 1560 aa11.1□□□□□ -0.63
CACNA1A-233ENST00000636974 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.09□□□□□ -0.63
CACNA1A-233ENST00000636974 FAM135AQ9P2D6 1515 aa11.09□□□□□ -0.63
CACNA1A-233ENST00000636974 ARHGAP5Q13017 1502 aa11.09□□□□□ -0.63
CACNA1A-233ENST00000636974 HNRNPUQ00839 825 aaKnown RBP eCLIP11.08□□□□□ -0.64
CACNA1A-233ENST00000636974 KTN1Q86UP2 1357 aaKnown RBP11.08□□□□□ -0.64
CACNA1A-233ENST00000636974 ERBINQ96RT1 1412 aa11.08□□□□□ -0.64
CACNA1A-233ENST00000636974 C11orf95C9JLR9 678 aaPredicted RBP11.08□□□□□ -0.64
CACNA1A-233ENST00000636974 ARAP3Q8WWN8 1544 aa11.07□□□□□ -0.64
CACNA1A-233ENST00000636974 SYCP2Q9BX26 1530 aa11.07□□□□□ -0.64
CACNA1A-233ENST00000636974 ATP10AO60312 1499 aa11.07□□□□□ -0.64
CACNA1A-233ENST00000636974 MYO5CQ9NQX4 1742 aa11.07□□□□□ -0.64
CACNA1A-233ENST00000636974 ATXN8OSP0DMR3 200 aa11.07□□□□□ -0.64
CACNA1A-233ENST00000636974 HNRNPMP52272 730 aaKnown RBP eCLIP11.07□□□□□ -0.64
CACNA1A-233ENST00000636974 DUOX2Q9NRD8 1548 aa11.07□□□□□ -0.64
CACNA1A-233ENST00000636974 TTC37Q6PGP7 1564 aa11.07□□□□□ -0.64
CACNA1A-233ENST00000636974 MAGI2Q86UL8 1455 aa11.06□□□□□ -0.64
CACNA1A-233ENST00000636974 CLASP1Q7Z460 1538 aa11.06□□□□□ -0.64
CACNA1A-233ENST00000636974 PLCH2O75038 1416 aa11.06□□□□□ -0.64
CACNA1A-233ENST00000636974 ZBED9Q6R2W3 1325 aa11.06□□□□□ -0.64
CACNA1A-233ENST00000636974 CCDC144AA2RUR9 1427 aa11.05□□□□□ -0.64
CACNA1A-233ENST00000636974 IQGAP3Q86VI3 1631 aa11.05□□□□□ -0.64
CACNA1A-233ENST00000636974 MRS2Q9HD23 443 aa11.04□□□□□ -0.64
CACNA1A-233ENST00000636974 DHX29Q7Z478 1369 aaKnown RBP11.04□□□□□ -0.64
CACNA1A-233ENST00000636974 CARD11Q9BXL7 1154 aa11.03□□□□□ -0.64
CACNA1A-233ENST00000636974 LAMC1P11047 1609 aa11.03□□□□□ -0.64
CACNA1A-233ENST00000636974 GPRASP1Q5JY77 1395 aa11.02□□□□□ -0.64
CACNA1A-233ENST00000636974 RTEL1-TNFRSF6BF6WH68 1400 aa11.02□□□□□ -0.64
CACNA1A-233ENST00000636974 EFCAB2Q5VUJ9 269 aa11.02□□□□□ -0.65
CACNA1A-233ENST00000636974 EIF2AK4Q9P2K8 1649 aaKnown RBP11.02□□□□□ -0.65
CACNA1A-233ENST00000636974 PRAG1Q86YV5 1406 aa11.02□□□□□ -0.65
CACNA1A-233ENST00000636974 STAC3Q96MF2 364 aa11.01□□□□□ -0.65
CACNA1A-233ENST00000636974 ABCC1P33527 1531 aa11.01□□□□□ -0.65
CACNA1A-233ENST00000636974 TSHZ2Q9NRE2 1034 aa11□□□□□ -0.65
CACNA1A-233ENST00000636974 BCORL1Q5H9F3 1711 aa11□□□□□ -0.65
CACNA1A-233ENST00000636974 ZCCHC11Q5TAX3 1644 aaKnown RBP11□□□□□ -0.65
CACNA1A-233ENST00000636974 ZNF326Q5BKZ1 582 aaKnown RBP10.99□□□□□ -0.65
CACNA1A-233ENST00000636974 PIAS4Q8N2W9 510 aaPredicted RBP10.99□□□□□ -0.65
CACNA1A-233ENST00000636974 DCAF11Q8TEB1 546 aa10.99□□□□□ -0.65
CACNA1A-233ENST00000636974 TRPM1Q7Z4N2 1603 aa10.98□□□□□ -0.65
CACNA1A-233ENST00000636974 RALBP1Q15311 655 aa10.98□□□□□ -0.65
CACNA1A-233ENST00000636974 ERCC6L2Q5T890 1561 aa10.98□□□□□ -0.65
CACNA1A-233ENST00000636974 WASHC2CQ9Y4E1 1318 aa10.98□□□□□ -0.65
CACNA1A-233ENST00000636974 PLA2R1Q13018 1463 aa10.97□□□□□ -0.65
CACNA1A-233ENST00000636974 PAXIP1Q6ZW49 1069 aaPredicted RBP10.97□□□□□ -0.65
CACNA1A-233ENST00000636974 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.97□□□□□ -0.65
CACNA1A-233ENST00000636974 WDR7Q9Y4E6 1490 aa10.97□□□□□ -0.65
CACNA1A-233ENST00000636974 BRD4O60885 1362 aaPredicted RBP10.96□□□□□ -0.65
CACNA1A-233ENST00000636974 FAM9BQ8IZU0 186 aa10.96□□□□□ -0.65
CACNA1A-233ENST00000636974 CCDC184Q52MB2 194 aa10.95□□□□□ -0.66
CACNA1A-233ENST00000636974 PRDM15P57071 1507 aaPredicted RBP10.95□□□□□ -0.66
CACNA1A-233ENST00000636974 A2MP01023 1474 aa10.95□□□□□ -0.66
CACNA1A-233ENST00000636974 E9PCH4 1651 aa10.95□□□□□ -0.66
CACNA1A-233ENST00000636974 INSRP06213 1382 aa10.95□□□□□ -0.66
CACNA1A-233ENST00000636974 ST20-MTHFSA0A0A6YYL1 179 aa10.95□□□□□ -0.66
CACNA1A-233ENST00000636974 SMG6Q86US8 1419 aaKnown RBP10.95□□□□□ -0.66
CACNA1A-233ENST00000636974 NEURL4Q96JN8 1562 aa10.94□□□□□ -0.66
CACNA1A-233ENST00000636974 MYBBP1AQ9BQG0 1328 aaKnown RBP10.94□□□□□ -0.66
CACNA1A-233ENST00000636974 KLHL34Q8N239 644 aa10.94□□□□□ -0.66
CACNA1A-233ENST00000636974 ZMYM4Q5VZL5 1548 aa10.94□□□□□ -0.66
CACNA1A-233ENST00000636974 BBXQ8WY36 941 aaPredicted RBP10.93□□□□□ -0.66
CACNA1A-233ENST00000636974 CFAP44Q96MT7 982 aa10.93□□□□□ -0.66
CACNA1A-233ENST00000636974 ZFYVE16Q7Z3T8 1539 aa10.93□□□□□ -0.66
CACNA1A-233ENST00000636974 COL17A1Q9UMD9 1497 aaPredicted RBP10.93□□□□□ -0.66
CACNA1A-233ENST00000636974 NBR1Q14596 966 aa10.93□□□□□ -0.66
CACNA1A-233ENST00000636974 PPP4R2Q9NY27 417 aa10.93□□□□□ -0.66
CACNA1A-233ENST00000636974 TRPM2O94759 1503 aa10.92□□□□□ -0.66
CACNA1A-233ENST00000636974 DEPDC5O75140 1603 aa10.92□□□□□ -0.66
CACNA1A-233ENST00000636974 LRPPRCP42704 1394 aaKnown RBP10.92□□□□□ -0.66
CACNA1A-233ENST00000636974 SPAG9O60271 1321 aaKnown RBP10.91□□□□□ -0.66
CACNA1A-233ENST00000636974 PTPRTO14522 1441 aa10.91□□□□□ -0.66
CACNA1A-233ENST00000636974 TRAPPC8Q9Y2L5 1435 aa10.91□□□□□ -0.66
CACNA1A-233ENST00000636974 TMC1Q8TDI8 760 aa10.91□□□□□ -0.66
CACNA1A-233ENST00000636974 PNISRQ8TF01 805 aaKnown RBP10.91□□□□□ -0.66
CACNA1A-233ENST00000636974 ABCA9Q8IUA7 1624 aa10.91□□□□□ -0.66
CACNA1A-233ENST00000636974 RNF17Q9BXT8 1623 aaKnown RBP10.91□□□□□ -0.66
CACNA1A-233ENST00000636974 KANK1Q14678 1352 aa10.9□□□□□ -0.66
CACNA1A-233ENST00000636974 PARD3Q8TEW0 1356 aa10.9□□□□□ -0.67
CACNA1A-233ENST00000636974 NUDCQ9Y266 331 aa10.9□□□□□ -0.67
CACNA1A-233ENST00000636974 VWDEQ8N2E2 1590 aa10.89□□□□□ -0.67
CACNA1A-233ENST00000636974 INO80Q9ULG1 1556 aaPredicted RBP10.89□□□□□ -0.67
CACNA1A-233ENST00000636974 NLRP13Q86W25 1043 aa10.89□□□□□ -0.67
CACNA1A-233ENST00000636974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.89□□□□□ -0.67
CACNA1A-233ENST00000636974 SCAPERQ9BY12 1400 aa10.89□□□□□ -0.67
CACNA1A-233ENST00000636974 FANCAO15360 1455 aa10.88□□□□□ -0.67
CACNA1A-233ENST00000636974 TMF1P82094 1093 aa10.88□□□□□ -0.67
CACNA1A-233ENST00000636974 POLR3GLQ9BT43 218 aa10.88□□□□□ -0.67
CACNA1A-233ENST00000636974 ATP7AQ04656 1500 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms