RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 NASPP49321 788 aaPredicted RBP7.51□□□□□ -1.21
SCN2A-213ENST00000636769 GPATCH3Q96I76 525 aa7.51□□□□□ -1.21
SCN2A-213ENST00000636769 R3HCC1Q9Y3T6 440 aaKnown RBP7.51□□□□□ -1.21
SCN2A-213ENST00000636769 CCDC88BA6NC98 1476 aa7.5□□□□□ -1.21
SCN2A-213ENST00000636769 ERCC4Q92889 916 aaPredicted RBP7.5□□□□□ -1.21
SCN2A-213ENST00000636769 NPM1P06748 294 aaKnown RBP eCLIP7.5□□□□□ -1.21
SCN2A-213ENST00000636769 TSR1Q2NL82 804 aaKnown RBP7.5□□□□□ -1.21
SCN2A-213ENST00000636769 ARHGAP35Q9NRY4 1499 aa7.5□□□□□ -1.21
SCN2A-213ENST00000636769 REC8O95072 547 aa7.5□□□□□ -1.21
SCN2A-213ENST00000636769 CAVIN1Q6NZI2 390 aaKnown RBP7.5□□□□□ -1.21
SCN2A-213ENST00000636769 AK7Q96M32 723 aa7.5□□□□□ -1.21
SCN2A-213ENST00000636769 LETM1O95202 739 aaPredicted RBP7.49□□□□□ -1.21
SCN2A-213ENST00000636769 PDCL2Q8N4E4 241 aa7.49□□□□□ -1.21
SCN2A-213ENST00000636769 FMN1Q68DA7 1419 aa7.49□□□□□ -1.21
SCN2A-213ENST00000636769 MBD3O95983 291 aa7.49□□□□□ -1.21
SCN2A-213ENST00000636769 RDXP35241 583 aaKnown RBP7.49□□□□□ -1.21
SCN2A-213ENST00000636769 USP8P40818 1118 aa7.49□□□□□ -1.21
SCN2A-213ENST00000636769 DCAF11Q8TEB1 546 aa7.49□□□□□ -1.21
SCN2A-213ENST00000636769 PRKRIP1Q9H875 184 aaPredicted RBP7.49□□□□□ -1.21
SCN2A-213ENST00000636769 MNS1Q8NEH6 495 aa7.49□□□□□ -1.21
SCN2A-213ENST00000636769 SMC4Q9NTJ3 1288 aa7.49□□□□□ -1.21
SCN2A-213ENST00000636769 SLC4A3P48751 1232 aa7.48□□□□□ -1.21
SCN2A-213ENST00000636769 BRPF3Q9ULD4 1205 aa7.48□□□□□ -1.21
SCN2A-213ENST00000636769 E9PSI1 815 aa7.48□□□□□ -1.21
SCN2A-213ENST00000636769 EXOC6Q8TAG9 804 aa7.48□□□□□ -1.21
SCN2A-213ENST00000636769 CCP110O43303 1012 aa7.48□□□□□ -1.21
SCN2A-213ENST00000636769 CARMIL1Q5VZK9 1371 aa7.48□□□□□ -1.21
SCN2A-213ENST00000636769 CHMP7Q8WUX9 453 aaPredicted RBP7.48□□□□□ -1.21
SCN2A-213ENST00000636769 IL27Q8NEV9 243 aa7.48□□□□□ -1.21
SCN2A-213ENST00000636769 IPO7O95373 1038 aaKnown RBP7.47□□□□□ -1.21
SCN2A-213ENST00000636769 DCTN1Q14203 1278 aa7.47□□□□□ -1.21
SCN2A-213ENST00000636769 ZNF592Q92610 1267 aa7.47□□□□□ -1.21
SCN2A-213ENST00000636769 CCDC191Q8NCU4 936 aa7.47□□□□□ -1.21
SCN2A-213ENST00000636769 SF3A1Q15459 793 aaKnown RBP7.47□□□□□ -1.21
SCN2A-213ENST00000636769 HOMER1Q86YM7 354 aa7.47□□□□□ -1.21
SCN2A-213ENST00000636769 CCAR2Q8N163 923 aaKnown RBP7.47□□□□□ -1.21
SCN2A-213ENST00000636769 TRAK2O60296 914 aa7.46□□□□□ -1.21
SCN2A-213ENST00000636769 LMOD3Q0VAK6 560 aa7.46□□□□□ -1.21
SCN2A-213ENST00000636769 DHX57Q6P158 1386 aaKnown RBP7.46□□□□□ -1.21
SCN2A-213ENST00000636769 LEKR1Q6ZMV7 388 aa7.46□□□□□ -1.21
SCN2A-213ENST00000636769 PDCL3Q9H2J4 239 aa7.46□□□□□ -1.22
SCN2A-213ENST00000636769 IFT57Q9NWB7 429 aa7.46□□□□□ -1.22
SCN2A-213ENST00000636769 FOXD4L1Q9NU39 408 aa7.46□□□□□ -1.22
SCN2A-213ENST00000636769 POGKQ9P215 609 aa7.46□□□□□ -1.22
SCN2A-213ENST00000636769 ZKSCAN2Q63HK3 967 aa7.46□□□□□ -1.22
SCN2A-213ENST00000636769 ESPNB1AK53 854 aa7.45□□□□□ -1.22
SCN2A-213ENST00000636769 RRP12Q5JTH9 1297 aaKnown RBP7.45□□□□□ -1.22
SCN2A-213ENST00000636769 RUFY1Q96T51 708 aa7.45□□□□□ -1.22
SCN2A-213ENST00000636769 H0YHG0 523 aa7.45□□□□□ -1.22
SCN2A-213ENST00000636769 HSP90B1P14625 803 aaKnown RBP7.45□□□□□ -1.22
SCN2A-213ENST00000636769 RTF1Q92541 710 aaKnown RBP7.45□□□□□ -1.22
SCN2A-213ENST00000636769 U2AF1L5P0DN76 240 aaPredicted RBP7.45□□□□□ -1.22
SCN2A-213ENST00000636769 U2AF1Q01081 240 aaKnown RBP eCLIP7.45□□□□□ -1.22
SCN2A-213ENST00000636769 TRIM6-TRIM34B2RNG4 842 aa7.45□□□□□ -1.22
SCN2A-213ENST00000636769 ANKRD20A12PQ8NF67 263 aa7.45□□□□□ -1.22
SCN2A-213ENST00000636769 CEP89Q96ST8 783 aa7.45□□□□□ -1.22
SCN2A-213ENST00000636769 CRBNQ96SW2 442 aa7.45□□□□□ -1.22
SCN2A-213ENST00000636769 STK31Q9BXU1 1019 aa7.44□□□□□ -1.22
SCN2A-213ENST00000636769 DDX19BQ9UMR2 479 aa7.44□□□□□ -1.22
SCN2A-213ENST00000636769 HOOK1Q9UJC3 728 aaKnown RBP7.44□□□□□ -1.22
SCN2A-213ENST00000636769 CUX2O14529 1486 aa7.44□□□□□ -1.22
SCN2A-213ENST00000636769 C22orf23Q9BZE7 217 aa7.44□□□□□ -1.22
SCN2A-213ENST00000636769 H3BQV1 296 aa7.44□□□□□ -1.22
SCN2A-213ENST00000636769 IFFO2Q5TF58 517 aa7.44□□□□□ -1.22
SCN2A-213ENST00000636769 DEF6Q9H4E7 631 aa7.43□□□□□ -1.22
SCN2A-213ENST00000636769 NAT10Q9H0A0 1025 aaKnown RBP7.43□□□□□ -1.22
SCN2A-213ENST00000636769 KANK1Q14678 1352 aa7.43□□□□□ -1.22
SCN2A-213ENST00000636769 RNF20Q5VTR2 975 aa7.43□□□□□ -1.22
SCN2A-213ENST00000636769 SASS6Q6UVJ0 657 aa7.43□□□□□ -1.22
SCN2A-213ENST00000636769 MPHOSPH9Q99550 1183 aa7.43□□□□□ -1.22
SCN2A-213ENST00000636769 APBB1O00213 710 aa7.43□□□□□ -1.22
SCN2A-213ENST00000636769 CIZ1Q9ULV3 898 aaPredicted RBP7.43□□□□□ -1.22
SCN2A-213ENST00000636769 RUFY2Q8WXA3 655 aa7.42□□□□□ -1.22
SCN2A-213ENST00000636769 HDGFL2Q7Z4V5 671 aaPredicted RBP7.42□□□□□ -1.22
SCN2A-213ENST00000636769 ZSCAN30Q86W11 494 aa7.42□□□□□ -1.22
SCN2A-213ENST00000636769 TOP2AP11388 1531 aaKnown RBP7.42□□□□□ -1.22
SCN2A-213ENST00000636769 TPD52L1Q16890 204 aaPredicted RBP7.42□□□□□ -1.22
SCN2A-213ENST00000636769 GRPEL1Q9HAV7 217 aa7.42□□□□□ -1.22
SCN2A-213ENST00000636769 FAM184AQ8NB25 1140 aa7.42□□□□□ -1.22
SCN2A-213ENST00000636769 MCM2P49736 904 aa7.42□□□□□ -1.22
SCN2A-213ENST00000636769 KANK4Q5T7N3 995 aaPredicted RBP7.42□□□□□ -1.22
SCN2A-213ENST00000636769 FRAT2O75474 233 aaPredicted RBP7.41□□□□□ -1.22
SCN2A-213ENST00000636769 ZKSCAN1P17029 563 aaPredicted RBP7.41□□□□□ -1.22
SCN2A-213ENST00000636769 TAOK2Q9UL54 1235 aa7.41□□□□□ -1.22
SCN2A-213ENST00000636769 CLUAP1Q96AJ1 413 aa7.41□□□□□ -1.22
SCN2A-213ENST00000636769 SPAG9O60271 1321 aaKnown RBP7.41□□□□□ -1.22
SCN2A-213ENST00000636769 PKD2Q13563 968 aa7.41□□□□□ -1.22
SCN2A-213ENST00000636769 INTS3Q68E01 1043 aaKnown RBP7.41□□□□□ -1.22
SCN2A-213ENST00000636769 TSPY26PQ9H489 355 aa7.41□□□□□ -1.22
SCN2A-213ENST00000636769 CALCOCO1Q9P1Z2 691 aa7.41□□□□□ -1.22
SCN2A-213ENST00000636769 UQCRHLA0A096LP55 91 aa7.41□□□□□ -1.22
SCN2A-213ENST00000636769 UQCRHP07919 91 aa7.41□□□□□ -1.22
SCN2A-213ENST00000636769 C14orf37Q86TY3 774 aa7.41□□□□□ -1.22
SCN2A-213ENST00000636769 L3MBTL2Q969R5 705 aa7.41□□□□□ -1.22
SCN2A-213ENST00000636769 ANKRD30AQ9BXX3 1397 aa7.41□□□□□ -1.22
SCN2A-213ENST00000636769 CCDC112Q8NEF3 446 aa7.4□□□□□ -1.22
SCN2A-213ENST00000636769 BACH2Q9BYV9 841 aa7.4□□□□□ -1.22
SCN2A-213ENST00000636769 KIF7Q2M1P5 1343 aa7.4□□□□□ -1.22
SCN2A-213ENST00000636769 EIF3JO75822 258 aaKnown RBP7.4□□□□□ -1.22
SCN2A-213ENST00000636769 MCTP1Q6DN14 999 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms