RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 RALBP1Q15311 655 aa28.98■■■□□ 2.23
CLN5-215ENST00000636767 PLEKHD1A6NEE1 506 aa28.95■■■□□ 2.23
CLN5-215ENST00000636767 NUP160Q12769 1436 aa28.95■■■□□ 2.22
CLN5-215ENST00000636767 DCAF11Q8TEB1 546 aa28.95■■■□□ 2.22
CLN5-215ENST00000636767 ATP10BO94823 1461 aa28.94■■■□□ 2.22
CLN5-215ENST00000636767 JPH4Q96JJ6 628 aa28.93■■■□□ 2.22
CLN5-215ENST00000636767 ARHGEF5Q12774 1597 aa28.93■■■□□ 2.22
CLN5-215ENST00000636767 TSPY4P0CV99 314 aa28.91■■■□□ 2.22
CLN5-215ENST00000636767 TSPY10P0CW01 314 aa28.91■■■□□ 2.22
CLN5-215ENST00000636767 DEKP35659 375 aaKnown RBP28.91■■■□□ 2.22
CLN5-215ENST00000636767 ANP32AP39687 249 aaKnown RBP28.91■■■□□ 2.22
CLN5-215ENST00000636767 TRPM1Q7Z4N2 1603 aa28.9■■■□□ 2.22
CLN5-215ENST00000636767 RRP1P56182 461 aaKnown RBP28.9■■■□□ 2.22
CLN5-215ENST00000636767 IPO9Q96P70 1041 aaKnown RBP28.89■■■□□ 2.22
CLN5-215ENST00000636767 FAM135AQ9P2D6 1515 aa28.87■■■□□ 2.21
CLN5-215ENST00000636767 FBLN2P98095 1184 aa28.87■■■□□ 2.21
CLN5-215ENST00000636767 PARD3Q8TEW0 1356 aa28.87■■■□□ 2.21
CLN5-215ENST00000636767 HNRNPMP52272 730 aaKnown RBP eCLIP28.85■■■□□ 2.21
CLN5-215ENST00000636767 NBR1Q14596 966 aa28.85■■■□□ 2.21
CLN5-215ENST00000636767 PRAG1Q86YV5 1406 aa28.85■■■□□ 2.21
CLN5-215ENST00000636767 NLRP13Q86W25 1043 aa28.84■■■□□ 2.21
CLN5-215ENST00000636767 EXOC6Q8TAG9 804 aa28.82■■■□□ 2.2
CLN5-215ENST00000636767 RCAN3Q9UKA8 241 aa28.82■■■□□ 2.2
CLN5-215ENST00000636767 SAMD9LQ8IVG5 1584 aa28.81■■■□□ 2.2
CLN5-215ENST00000636767 CCDC141Q6ZP82 1450 aa28.81■■■□□ 2.2
CLN5-215ENST00000636767 CCDC144AA2RUR9 1427 aa28.78■■■□□ 2.2
CLN5-215ENST00000636767 CDC42BPBQ9Y5S2 1711 aa28.77■■■□□ 2.2
CLN5-215ENST00000636767 PREX2Q70Z35 1606 aa28.76■■■□□ 2.2
CLN5-215ENST00000636767 PDE3BQ13370 1112 aa28.76■■■□□ 2.2
CLN5-215ENST00000636767 ZBTB47Q9UFB7 747 aaPredicted RBP28.76■■■□□ 2.19
CLN5-215ENST00000636767 SALL2Q9Y467 1007 aaPredicted RBP28.76■■■□□ 2.19
CLN5-215ENST00000636767 PER1O15534 1290 aaPredicted RBP28.75■■■□□ 2.19
CLN5-215ENST00000636767 GPRASP1Q5JY77 1395 aa28.75■■■□□ 2.19
CLN5-215ENST00000636767 COL17A1Q9UMD9 1497 aaPredicted RBP28.75■■■□□ 2.19
CLN5-215ENST00000636767 LAMC1P11047 1609 aa28.74■■■□□ 2.19
CLN5-215ENST00000636767 NBPF1Q3BBV0 1214 aa28.73■■■□□ 2.19
CLN5-215ENST00000636767 A2MP01023 1474 aa28.72■■■□□ 2.19
CLN5-215ENST00000636767 UNC13BO14795 1591 aa28.72■■■□□ 2.19
CLN5-215ENST00000636767 PRDM15P57071 1507 aaPredicted RBP28.72■■■□□ 2.19
CLN5-215ENST00000636767 PLA2R1Q13018 1463 aa28.72■■■□□ 2.19
CLN5-215ENST00000636767 TCERG1O14776 1098 aaKnown RBP28.71■■■□□ 2.19
CLN5-215ENST00000636767 DISP3Q9P2K9 1392 aa28.68■■■□□ 2.18
CLN5-215ENST00000636767 BLMP54132 1417 aaPredicted RBP28.68■■■□□ 2.18
CLN5-215ENST00000636767 CDCA7LQ96GN5 454 aa28.68■■■□□ 2.18
CLN5-215ENST00000636767 RGL3Q3MIN7 710 aa28.67■■■□□ 2.18
CLN5-215ENST00000636767 MYO5CQ9NQX4 1742 aa28.67■■■□□ 2.18
CLN5-215ENST00000636767 ZMYM4Q5VZL5 1548 aa28.67■■■□□ 2.18
CLN5-215ENST00000636767 INSRP06213 1382 aa28.66■■■□□ 2.18
CLN5-215ENST00000636767 MAST1Q9Y2H9 1570 aa28.66■■■□□ 2.18
CLN5-215ENST00000636767 SYCP2Q9BX26 1530 aa28.65■■■□□ 2.18
CLN5-215ENST00000636767 TESK2Q96S53 571 aa28.65■■■□□ 2.18
CLN5-215ENST00000636767 WASHC2CQ9Y4E1 1318 aa28.65■■■□□ 2.18
CLN5-215ENST00000636767 RSPH4AQ5TD94 716 aa28.64■■■□□ 2.18
CLN5-215ENST00000636767 EIF2AK4Q9P2K8 1649 aaKnown RBP28.63■■■□□ 2.17
CLN5-215ENST00000636767 PDE4AP27815 886 aa28.62■■■□□ 2.17
CLN5-215ENST00000636767 CC2D1BQ5T0F9 858 aaKnown RBP28.62■■■□□ 2.17
CLN5-215ENST00000636767 IQGAP3Q86VI3 1631 aa28.62■■■□□ 2.17
CLN5-215ENST00000636767 ERBINQ96RT1 1412 aa28.61■■■□□ 2.17
CLN5-215ENST00000636767 MS4A1P11836 297 aa28.6■■■□□ 2.17
CLN5-215ENST00000636767 NPM2Q86SE8 214 aaKnown RBP28.6■■■□□ 2.17
CLN5-215ENST00000636767 RTL5Q5HYW3 569 aaPredicted RBP28.59■■■□□ 2.17
CLN5-215ENST00000636767 BACH2Q9BYV9 841 aa28.59■■■□□ 2.17
CLN5-215ENST00000636767 PANK3Q9H999 370 aa28.58■■■□□ 2.17
CLN5-215ENST00000636767 TTC37Q6PGP7 1564 aa28.57■■■□□ 2.16
CLN5-215ENST00000636767 PLEKHH2Q8IVE3 1493 aa28.57■■■□□ 2.16
CLN5-215ENST00000636767 PLXNC1O60486 1568 aa28.57■■■□□ 2.16
CLN5-215ENST00000636767 PLIN1O60240 522 aa28.55■■■□□ 2.16
CLN5-215ENST00000636767 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.55■■■□□ 2.16
CLN5-215ENST00000636767 ARHGAP5Q13017 1502 aa28.55■■■□□ 2.16
CLN5-215ENST00000636767 RNF17Q9BXT8 1623 aaKnown RBP28.54■■■□□ 2.16
CLN5-215ENST00000636767 TMF1P82094 1093 aa28.52■■■□□ 2.16
CLN5-215ENST00000636767 ATP10AO60312 1499 aa28.52■■■□□ 2.16
CLN5-215ENST00000636767 CRBNQ96SW2 442 aa28.51■■■□□ 2.15
CLN5-215ENST00000636767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.5■■■□□ 2.15
CLN5-215ENST00000636767 MAGI2Q86UL8 1455 aa28.49■■■□□ 2.15
CLN5-215ENST00000636767 DUOX2Q9NRD8 1548 aa28.46■■■□□ 2.15
CLN5-215ENST00000636767 WDR7Q9Y4E6 1490 aa28.43■■■□□ 2.14
CLN5-215ENST00000636767 SKAP1Q86WV1 359 aa28.43■■■□□ 2.14
CLN5-215ENST00000636767 ADAMTS8Q9UP79 889 aa28.42■■■□□ 2.14
CLN5-215ENST00000636767 C20orf194Q5TEA3 1177 aa28.4■■■□□ 2.14
CLN5-215ENST00000636767 LAS1LQ9Y4W2 734 aaKnown RBP28.4■■■□□ 2.14
CLN5-215ENST00000636767 IQGAP1P46940 1657 aa28.4■■■□□ 2.14
CLN5-215ENST00000636767 MADDQ8WXG6 1647 aa28.39■■■□□ 2.13
CLN5-215ENST00000636767 PLEKHH1Q9ULM0 1364 aa28.37■■■□□ 2.13
CLN5-215ENST00000636767 KDM2BQ8NHM5 1336 aa28.36■■■□□ 2.13
CLN5-215ENST00000636767 CHD1O14646 1710 aa28.36■■■□□ 2.13
CLN5-215ENST00000636767 PPP2R1AP30153 589 aa28.35■■■□□ 2.13
CLN5-215ENST00000636767 NEFMP07197 916 aa28.34■■■□□ 2.13
CLN5-215ENST00000636767 USP35Q9P2H5 1018 aa28.33■■■□□ 2.13
CLN5-215ENST00000636767 SYNMO15061 1565 aa28.33■■■□□ 2.13
CLN5-215ENST00000636767 DUSP27Q5VZP5 1158 aa28.33■■■□□ 2.13
CLN5-215ENST00000636767 KNSTRNQ9Y448 316 aa28.32■■■□□ 2.12
CLN5-215ENST00000636767 ZNF521Q96K83 1311 aa28.31■■■□□ 2.12
CLN5-215ENST00000636767 AMER1Q5JTC6 1135 aaPredicted RBP28.31■■■□□ 2.12
CLN5-215ENST00000636767 CLASP1Q7Z460 1538 aa28.3■■■□□ 2.12
CLN5-215ENST00000636767 WDR43Q15061 677 aaKnown RBP eCLIP28.3■■■□□ 2.12
CLN5-215ENST00000636767 DDRGK1Q96HY6 314 aa28.29■■■□□ 2.12
CLN5-215ENST00000636767 SPHKAPQ2M3C7 1700 aa28.29■■■□□ 2.12
CLN5-215ENST00000636767 PPM1GO15355 546 aaPredicted RBP28.29■■■□□ 2.12
CLN5-215ENST00000636767 ABCC2Q92887 1545 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms