RNA–Protein interactions for RNA: ENST00000636605.1

CLN8-210, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,069 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-210ENST00000636605 PHF14O94880 888 aa10.75□□□□□ -0.69
CLN8-210ENST00000636605 ZBED2Q9BTP6 218 aa10.75□□□□□ -0.69
CLN8-210ENST00000636605 FBXW7Q969H0 707 aa10.73□□□□□ -0.69
CLN8-210ENST00000636605 CFAP44Q96MT7 982 aa10.73□□□□□ -0.69
CLN8-210ENST00000636605 BHMG1C9JSJ3 638 aaPredicted RBP10.72□□□□□ -0.69
CLN8-210ENST00000636605 PDIA6Q15084 440 aa10.72□□□□□ -0.69
CLN8-210ENST00000636605 TYW1BQ6NUM6 668 aa10.72□□□□□ -0.69
CLN8-210ENST00000636605 ARIH1Q9Y4X5 557 aaPredicted RBP10.72□□□□□ -0.69
CLN8-210ENST00000636605 PPP1R3GB7ZBB8 358 aa10.71□□□□□ -0.69
CLN8-210ENST00000636605 HCSTQ9UBK5 93 aa10.69□□□□□ -0.7
CLN8-210ENST00000636605 EPAS1Q99814 870 aa10.68□□□□□ -0.7
CLN8-210ENST00000636605 COL9A1P20849 921 aa10.67□□□□□ -0.7
CLN8-210ENST00000636605 E2F4Q16254 413 aa10.67□□□□□ -0.7
CLN8-210ENST00000636605 SPDYE16A6NNV3 312 aaPredicted RBP10.64□□□□□ -0.71
CLN8-210ENST00000636605 KCTD12Q96CX2 325 aaKnown RBP10.63□□□□□ -0.71
CLN8-210ENST00000636605 C6orf132Q5T0Z8 1188 aa10.62□□□□□ -0.71
CLN8-210ENST00000636605 DDX12PQ92771 950 aa10.62□□□□□ -0.71
CLN8-210ENST00000636605 PROX2Q3B8N5 592 aa10.61□□□□□ -0.71
CLN8-210ENST00000636605 STAC3Q96MF2 364 aa10.61□□□□□ -0.71
CLN8-210ENST00000636605 RABGEF1Q9UJ41 708 aa10.61□□□□□ -0.71
CLN8-210ENST00000636605 EN1Q05925 392 aaPredicted RBP10.6□□□□□ -0.71
CLN8-210ENST00000636605 NBPF3Q9H094 633 aa10.6□□□□□ -0.71
CLN8-210ENST00000636605 MRPL50Q8N5N7 158 aaKnown RBP10.59□□□□□ -0.71
CLN8-210ENST00000636605 WDR70Q9NW82 654 aa10.59□□□□□ -0.71
CLN8-210ENST00000636605 NBR1Q14596 966 aa10.58□□□□□ -0.72
CLN8-210ENST00000636605 THSD4Q6ZMP0 1018 aa10.58□□□□□ -0.72
CLN8-210ENST00000636605 ONECUT3O60422 494 aaPredicted RBP10.57□□□□□ -0.72
CLN8-210ENST00000636605 TSHZ2Q9NRE2 1034 aa10.57□□□□□ -0.72
CLN8-210ENST00000636605 PRIM1P49642 420 aaKnown RBP10.56□□□□□ -0.72
CLN8-210ENST00000636605 RBM33Q96EV2 1170 aaKnown RBP10.55□□□□□ -0.72
CLN8-210ENST00000636605 PLA2G2EQ9NZK7 142 aa10.55□□□□□ -0.72
CLN8-210ENST00000636605 TSR1Q2NL82 804 aaKnown RBP10.54□□□□□ -0.72
CLN8-210ENST00000636605 LAPTM4BQ86VI4 370 aa10.54□□□□□ -0.72
CLN8-210ENST00000636605 WNT2BQ93097 391 aa10.54□□□□□ -0.72
CLN8-210ENST00000636605 TRIM6-TRIM34B2RNG4 842 aa10.53□□□□□ -0.72
CLN8-210ENST00000636605 KIAA1468Q9P260 1216 aa10.52□□□□□ -0.73
CLN8-210ENST00000636605 EIF4G1Q04637 1599 aaKnown RBP10.52□□□□□ -0.73
CLN8-210ENST00000636605 MAP3K7O43318 606 aa10.51□□□□□ -0.73
CLN8-210ENST00000636605 GOLGA8CPA6NN73 597 aa10.5□□□□□ -0.73
CLN8-210ENST00000636605 OSBPP22059 807 aa10.5□□□□□ -0.73
CLN8-210ENST00000636605 PTPN5P54829 565 aa10.49□□□□□ -0.73
CLN8-210ENST00000636605 KCNV2Q8TDN2 545 aa10.48□□□□□ -0.73
CLN8-210ENST00000636605 TSKSQ9UJT2 592 aa10.48□□□□□ -0.73
CLN8-210ENST00000636605 GRXCR2A6NFK2 248 aa10.47□□□□□ -0.73
CLN8-210ENST00000636605 ANKK1Q8NFD2 765 aa10.47□□□□□ -0.73
CLN8-210ENST00000636605 ARHGEF1Q92888 912 aaKnown RBP10.46□□□□□ -0.73
CLN8-210ENST00000636605 ZFRQ96KR1 1074 aaKnown RBP10.46□□□□□ -0.73
CLN8-210ENST00000636605 SEPT9Q9UHD8 586 aaPredicted RBP10.46□□□□□ -0.73
CLN8-210ENST00000636605 CC2D2AQ9P2K1 1620 aa10.45□□□□□ -0.74
CLN8-210ENST00000636605 SOWAHBA6NEL2 793 aa10.45□□□□□ -0.74
CLN8-210ENST00000636605 FAM98CQ17RN3 349 aaKnown RBP10.45□□□□□ -0.74
CLN8-210ENST00000636605 IFFO2Q5TF58 517 aa10.45□□□□□ -0.74
CLN8-210ENST00000636605 CERKQ8TCT0 537 aa10.45□□□□□ -0.74
CLN8-210ENST00000636605 CDHR5Q9HBB8 845 aa10.44□□□□□ -0.74
CLN8-210ENST00000636605 FAM198AQ9UFP1 575 aa10.44□□□□□ -0.74
CLN8-210ENST00000636605 BCAMP50895 628 aa10.43□□□□□ -0.74
CLN8-210ENST00000636605 PRSS12P56730 875 aa10.43□□□□□ -0.74
CLN8-210ENST00000636605 CDCA7LQ96GN5 454 aa10.43□□□□□ -0.74
CLN8-210ENST00000636605 RBM27Q9P2N5 1060 aaKnown RBP10.42□□□□□ -0.74
CLN8-210ENST00000636605 CECR2Q9BXF3 1484 aa10.42□□□□□ -0.74
CLN8-210ENST00000636605 PLCB2Q00722 1185 aa10.4□□□□□ -0.74
CLN8-210ENST00000636605 PACS2Q86VP3 889 aa10.4□□□□□ -0.74
CLN8-210ENST00000636605 C3orf80F5H4A9 247 aa10.39□□□□□ -0.75
CLN8-210ENST00000636605 TTC13Q8NBP0 860 aa10.39□□□□□ -0.75
CLN8-210ENST00000636605 NPDC1Q9NQX5 325 aaPredicted RBP10.39□□□□□ -0.75
CLN8-210ENST00000636605 MLLT3P42568 568 aaPredicted RBP10.38□□□□□ -0.75
CLN8-210ENST00000636605 NYAP1Q6ZVC0 841 aa10.38□□□□□ -0.75
CLN8-210ENST00000636605 BAZ1AQ9NRL2 1556 aaPredicted RBP10.38□□□□□ -0.75
CLN8-210ENST00000636605 ITGBL1O95965 494 aaPredicted RBP10.37□□□□□ -0.75
CLN8-210ENST00000636605 P3H3Q8IVL6 736 aa10.36□□□□□ -0.75
CLN8-210ENST00000636605 WBP1LQ9NX94 342 aa10.36□□□□□ -0.75
CLN8-210ENST00000636605 NBPF26B4DH59 902 aa10.35□□□□□ -0.75
CLN8-210ENST00000636605 LRCH3Q96II8 777 aa10.35□□□□□ -0.75
CLN8-210ENST00000636605 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.35□□□□□ -0.75
CLN8-210ENST00000636605 TATDN2Q93075 761 aa10.34□□□□□ -0.75
CLN8-210ENST00000636605 SMARCA4P51532 1647 aa10.33□□□□□ -0.76
CLN8-210ENST00000636605 SMAPO00193 183 aa10.33□□□□□ -0.76
CLN8-210ENST00000636605 TSR3Q9UJK0 312 aaKnown RBP10.33□□□□□ -0.76
CLN8-210ENST00000636605 SMARCA2P51531 1590 aa10.33□□□□□ -0.76
CLN8-210ENST00000636605 NCAPD3P42695 1498 aa10.32□□□□□ -0.76
CLN8-210ENST00000636605 A0A0G2JS52 829 aa10.32□□□□□ -0.76
CLN8-210ENST00000636605 PADI6Q6TGC4 694 aa10.31□□□□□ -0.76
CLN8-210ENST00000636605 PNMA3Q9UL41 463 aa10.31□□□□□ -0.76
CLN8-210ENST00000636605 HPS5Q9UPZ3 1129 aa10.31□□□□□ -0.76
CLN8-210ENST00000636605 ATAD2BQ9ULI0 1458 aa10.3□□□□□ -0.76
CLN8-210ENST00000636605 NUDT18Q6ZVK8 323 aa10.29□□□□□ -0.76
CLN8-210ENST00000636605 SAMD7Q7Z3H4 446 aa10.29□□□□□ -0.76
CLN8-210ENST00000636605 PTGDRQ13258 359 aa10.28□□□□□ -0.76
CLN8-210ENST00000636605 PEG3Q9GZU2 1588 aa10.27□□□□□ -0.76
CLN8-210ENST00000636605 RGS20O76081 388 aa10.27□□□□□ -0.77
CLN8-210ENST00000636605 HMGXB3Q12766 1538 aa10.26□□□□□ -0.77
CLN8-210ENST00000636605 SEMA3EO15041 775 aa10.25□□□□□ -0.77
CLN8-210ENST00000636605 EYA1Q99502 592 aa10.25□□□□□ -0.77
CLN8-210ENST00000636605 MROH2BQ7Z745 1585 aa10.24□□□□□ -0.77
CLN8-210ENST00000636605 BAZ1BQ9UIG0 1483 aaKnown RBP10.23□□□□□ -0.77
CLN8-210ENST00000636605 PPP4CP60510 307 aa10.23□□□□□ -0.77
CLN8-210ENST00000636605 TESPA1A2RU30 521 aaPredicted RBP10.21□□□□□ -0.77
CLN8-210ENST00000636605 KCNC4Q03721 635 aa10.2□□□□□ -0.78
CLN8-210ENST00000636605 TJAP1Q5JTD0 557 aa10.19□□□□□ -0.78
CLN8-210ENST00000636605 ADGRG1Q9Y653 693 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms