RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 TNS4Q8IZW8 715 aa3.17□□□□□ -1.9
SYNGAP1-215ENST00000636443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.17□□□□□ -1.9
SYNGAP1-215ENST00000636443 UGGT2Q9NYU1 1516 aa3.17□□□□□ -1.9
SYNGAP1-215ENST00000636443 DIP2CQ9Y2E4 1556 aa3.17□□□□□ -1.9
SYNGAP1-215ENST00000636443 XIRP1Q702N8 1843 aaKnown RBP3.16□□□□□ -1.9
SYNGAP1-215ENST00000636443 A2ML1A8K2U0 1454 aa3.16□□□□□ -1.9
SYNGAP1-215ENST00000636443 ZMYM3Q14202 1370 aa3.16□□□□□ -1.9
SYNGAP1-215ENST00000636443 AGLP35573 1532 aa3.16□□□□□ -1.9
SYNGAP1-215ENST00000636443 SHPRHQ149N8 1683 aa3.16□□□□□ -1.9
SYNGAP1-215ENST00000636443 ADGBQ8N7X0 1667 aa3.16□□□□□ -1.9
SYNGAP1-215ENST00000636443 CAMTA1Q9Y6Y1 1673 aa3.16□□□□□ -1.9
SYNGAP1-215ENST00000636443 ATP10BO94823 1461 aa3.16□□□□□ -1.9
SYNGAP1-215ENST00000636443 COL16A1Q07092 1604 aaPredicted RBP3.15□□□□□ -1.9
SYNGAP1-215ENST00000636443 ABCA6Q8N139 1617 aa3.15□□□□□ -1.9
SYNGAP1-215ENST00000636443 ABCC1P33527 1531 aa3.15□□□□□ -1.9
SYNGAP1-215ENST00000636443 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.15□□□□□ -1.9
SYNGAP1-215ENST00000636443 R3HDM1Q15032 1099 aaKnown RBP3.15□□□□□ -1.91
SYNGAP1-215ENST00000636443 CHIC1Q5VXU3 224 aa3.15□□□□□ -1.91
SYNGAP1-215ENST00000636443 BLMP54132 1417 aaPredicted RBP3.15□□□□□ -1.91
SYNGAP1-215ENST00000636443 GOLGA3Q08378 1498 aa3.15□□□□□ -1.91
SYNGAP1-215ENST00000636443 KIF14Q15058 1648 aa3.15□□□□□ -1.91
SYNGAP1-215ENST00000636443 CARMIL1Q5VZK9 1371 aa3.14□□□□□ -1.91
SYNGAP1-215ENST00000636443 REREQ9P2R6 1566 aa3.14□□□□□ -1.91
SYNGAP1-215ENST00000636443 FGD6Q6ZV73 1430 aa3.14□□□□□ -1.91
SYNGAP1-215ENST00000636443 DEPDC5O75140 1603 aa3.14□□□□□ -1.91
SYNGAP1-215ENST00000636443 ZNF518AQ6AHZ1 1483 aa3.14□□□□□ -1.91
SYNGAP1-215ENST00000636443 FAM135AQ9P2D6 1515 aa3.14□□□□□ -1.91
SYNGAP1-215ENST00000636443 CHD4Q14839 1912 aa3.13□□□□□ -1.91
SYNGAP1-215ENST00000636443 KIF27Q86VH2 1401 aa3.13□□□□□ -1.91
SYNGAP1-215ENST00000636443 COL13A1Q5TAT6 717 aaPredicted RBP3.13□□□□□ -1.91
SYNGAP1-215ENST00000636443 THEMISQ8N1K5 641 aaPredicted RBP3.13□□□□□ -1.91
SYNGAP1-215ENST00000636443 CTTNBP2Q8WZ74 1663 aa3.13□□□□□ -1.91
SYNGAP1-215ENST00000636443 KDM5DQ9BY66 1539 aa3.13□□□□□ -1.91
SYNGAP1-215ENST00000636443 IGF1RP08069 1367 aa3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 MSH6P52701 1360 aa3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 PLCH2O75038 1416 aa3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 BCL9LQ86UU0 1499 aa3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 PLEKHD1A6NEE1 506 aa3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 ADAMTS2O95450 1211 aa3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 BAG6P46379 1132 aa3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 P3H3Q8IVL6 736 aa3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 SLAIN2Q9P270 581 aa3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 USP21Q9UK80 565 aa3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 TRPC5Q9UL62 973 aaPredicted RBP3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 MYO5CQ9NQX4 1742 aa3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 UGGT1Q9NYU2 1555 aa3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 TMEM94Q12767 1356 aa3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 TNRQ92752 1358 aa3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 NINLQ9Y2I6 1382 aa3.12□□□□□ -1.91
SYNGAP1-215ENST00000636443 MED14O60244 1454 aa3.11□□□□□ -1.91
SYNGAP1-215ENST00000636443 HSPA6P17066 643 aa3.11□□□□□ -1.91
SYNGAP1-215ENST00000636443 GGT6Q6P531 493 aa3.11□□□□□ -1.91
SYNGAP1-215ENST00000636443 C14orf37Q86TY3 774 aa3.11□□□□□ -1.91
SYNGAP1-215ENST00000636443 PROSER2Q86WR7 435 aaPredicted RBP3.11□□□□□ -1.91
SYNGAP1-215ENST00000636443 AFAP1Q8N556 730 aa3.11□□□□□ -1.91
SYNGAP1-215ENST00000636443 ZC3H13Q5T200 1668 aaKnown RBP3.11□□□□□ -1.91
SYNGAP1-215ENST00000636443 CEP350Q5VT06 3117 aa3.1□□□□□ -1.91
SYNGAP1-215ENST00000636443 RTEL1-TNFRSF6BF6WH68 1400 aa3.1□□□□□ -1.91
SYNGAP1-215ENST00000636443 ATP7AQ04656 1500 aa3.1□□□□□ -1.91
SYNGAP1-215ENST00000636443 ARHGAP5Q13017 1502 aa3.1□□□□□ -1.91
SYNGAP1-215ENST00000636443 UNC13BO14795 1591 aa3.1□□□□□ -1.91
SYNGAP1-215ENST00000636443 TIAM1Q13009 1591 aa3.1□□□□□ -1.91
SYNGAP1-215ENST00000636443 EFCAB2Q5VUJ9 269 aa3.1□□□□□ -1.91
SYNGAP1-215ENST00000636443 WWC3Q9ULE0 1092 aa3.1□□□□□ -1.91
SYNGAP1-215ENST00000636443 EP400Q96L91 3159 aa3.09□□□□□ -1.91
SYNGAP1-215ENST00000636443 AHDC1Q5TGY3 1603 aaPredicted RBP3.09□□□□□ -1.91
SYNGAP1-215ENST00000636443 A0A0G2JS52 829 aa3.09□□□□□ -1.91
SYNGAP1-215ENST00000636443 MYT1Q01538 1121 aa3.09□□□□□ -1.91
SYNGAP1-215ENST00000636443 SPON1Q9HCB6 807 aa3.09□□□□□ -1.91
SYNGAP1-215ENST00000636443 SCAF11Q99590 1463 aaKnown RBP3.09□□□□□ -1.92
SYNGAP1-215ENST00000636443 MAP3K1Q13233 1512 aa3.09□□□□□ -1.92
SYNGAP1-215ENST00000636443 KDM5AP29375 1690 aaKnown RBP3.08□□□□□ -1.92
SYNGAP1-215ENST00000636443 BRWD3Q6RI45 1802 aa3.08□□□□□ -1.92
SYNGAP1-215ENST00000636443 EN1Q05925 392 aaPredicted RBP3.08□□□□□ -1.92
SYNGAP1-215ENST00000636443 FAM161AQ3B820 660 aa3.08□□□□□ -1.92
SYNGAP1-215ENST00000636443 BCANQ96GW7 911 aa3.08□□□□□ -1.92
SYNGAP1-215ENST00000636443 MLH3Q9UHC1 1453 aa3.08□□□□□ -1.92
SYNGAP1-215ENST00000636443 RGPD1P0DJD0 1748 aa3.07□□□□□ -1.92
SYNGAP1-215ENST00000636443 KIDINS220Q9ULH0 1771 aa3.07□□□□□ -1.92
SYNGAP1-215ENST00000636443 FAM83GA6ND36 823 aa3.07□□□□□ -1.92
SYNGAP1-215ENST00000636443 FBXO31Q5XUX0 539 aaPredicted RBP3.07□□□□□ -1.92
SYNGAP1-215ENST00000636443 PELP1Q8IZL8 1130 aaKnown RBP3.07□□□□□ -1.92
SYNGAP1-215ENST00000636443 ATRNO75882 1429 aa3.07□□□□□ -1.92
SYNGAP1-215ENST00000636443 NLRP1Q9C000 1473 aa3.07□□□□□ -1.92
SYNGAP1-215ENST00000636443 ABCC3O15438 1527 aa3.07□□□□□ -1.92
SYNGAP1-215ENST00000636443 DIP2AQ14689 1571 aa3.07□□□□□ -1.92
SYNGAP1-215ENST00000636443 KCNQ2O43526 872 aa3.06□□□□□ -1.92
SYNGAP1-215ENST00000636443 ATF3P18847 181 aa3.06□□□□□ -1.92
SYNGAP1-215ENST00000636443 PRDM15P57071 1507 aaPredicted RBP3.06□□□□□ -1.92
SYNGAP1-215ENST00000636443 GPR162Q16538 588 aa3.06□□□□□ -1.92
SYNGAP1-215ENST00000636443 SPHKAPQ2M3C7 1700 aa3.06□□□□□ -1.92
SYNGAP1-215ENST00000636443 NBPF8Q3BBV2 869 aa3.06□□□□□ -1.92
SYNGAP1-215ENST00000636443 NBPF14Q5TI25 921 aa3.06□□□□□ -1.92
SYNGAP1-215ENST00000636443 TNS2Q63HR2 1409 aa3.06□□□□□ -1.92
SYNGAP1-215ENST00000636443 AATKQ6ZMQ8 1374 aa3.06□□□□□ -1.92
SYNGAP1-215ENST00000636443 RALGAPBQ86X10 1494 aa3.06□□□□□ -1.92
SYNGAP1-215ENST00000636443 EID1Q9Y6B2 187 aa3.06□□□□□ -1.92
SYNGAP1-215ENST00000636443 NRKQ7Z2Y5 1582 aa3.05□□□□□ -1.92
SYNGAP1-215ENST00000636443 NUP153P49790 1475 aaKnown RBP3.05□□□□□ -1.92
SYNGAP1-215ENST00000636443 KCNA6P17658 529 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms