RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 FYB1O15117 783 aa21.63■■□□□ 1.05
CACNA1A-215ENST00000635727 KIF16BQ96L93 1317 aa21.63■■□□□ 1.05
CACNA1A-215ENST00000635727 NAP1L1P55209 391 aaKnown RBP21.63■■□□□ 1.05
CACNA1A-215ENST00000635727 SMC4Q9NTJ3 1288 aa21.62■■□□□ 1.05
CACNA1A-215ENST00000635727 GOLGA6L3A6NEY3 463 aa21.62■■□□□ 1.05
CACNA1A-215ENST00000635727 PAF1Q8N7H5 531 aa21.61■■□□□ 1.05
CACNA1A-215ENST00000635727 FAM184AQ8NB25 1140 aa21.61■■□□□ 1.05
CACNA1A-215ENST00000635727 SPAG9O60271 1321 aaKnown RBP21.61■■□□□ 1.05
CACNA1A-215ENST00000635727 TPM2P07951 284 aa21.6■■□□□ 1.05
CACNA1A-215ENST00000635727 IPO8O15397 1037 aaKnown RBP21.6■■□□□ 1.05
CACNA1A-215ENST00000635727 APPP05067 770 aa21.6■■□□□ 1.05
CACNA1A-215ENST00000635727 ZNF771Q7L3S4 317 aaPredicted RBP21.6■■□□□ 1.05
CACNA1A-215ENST00000635727 PPP1R1BQ9UD71 204 aaPredicted RBP21.59■■□□□ 1.05
CACNA1A-215ENST00000635727 IBSPP21815 317 aaPredicted RBP21.58■■□□□ 1.04
CACNA1A-215ENST00000635727 HDGFP51858 240 aaKnown RBP21.58■■□□□ 1.04
CACNA1A-215ENST00000635727 AMPHP49418 695 aa21.56■■□□□ 1.04
CACNA1A-215ENST00000635727 NGDNQ8NEJ9 315 aaKnown RBP21.56■■□□□ 1.04
CACNA1A-215ENST00000635727 CCDC43Q96MW1 224 aaKnown RBP21.56■■□□□ 1.04
CACNA1A-215ENST00000635727 ELL2O00472 640 aaPredicted RBP21.56■■□□□ 1.04
CACNA1A-215ENST00000635727 GOLGA6L19H0YKK7 550 aa21.56■■□□□ 1.04
CACNA1A-215ENST00000635727 ODF2Q5BJF6 829 aa21.55■■□□□ 1.04
CACNA1A-215ENST00000635727 VPS37DQ86XT2 251 aa21.55■■□□□ 1.04
CACNA1A-215ENST00000635727 PLCD4Q9BRC7 762 aa21.54■■□□□ 1.04
CACNA1A-215ENST00000635727 CT47A1Q5JQC4 288 aaPredicted RBP21.53■■□□□ 1.04
CACNA1A-215ENST00000635727 RRP7AQ9Y3A4 280 aaKnown RBP21.53■■□□□ 1.04
CACNA1A-215ENST00000635727 AEBP2Q6ZN18 517 aaPredicted RBP21.53■■□□□ 1.04
CACNA1A-215ENST00000635727 NOL10Q9BSC4 688 aaKnown RBP21.53■■□□□ 1.04
CACNA1A-215ENST00000635727 KANK1Q14678 1352 aa21.53■■□□□ 1.04
CACNA1A-215ENST00000635727 TTLL5Q6EMB2 1281 aa21.53■■□□□ 1.04
CACNA1A-215ENST00000635727 CSPP1Q1MSJ5 1256 aa21.53■■□□□ 1.04
CACNA1A-215ENST00000635727 EIF4G1Q04637 1599 aaKnown RBP21.52■■□□□ 1.04
CACNA1A-215ENST00000635727 TMEM132AQ24JP5 1023 aa21.52■■□□□ 1.04
CACNA1A-215ENST00000635727 RWDD1Q9H446 243 aaPredicted RBP21.51■■□□□ 1.03
CACNA1A-215ENST00000635727 CCDC70Q6NSX1 233 aa21.49■■□□□ 1.03
CACNA1A-215ENST00000635727 BECN2A8MW95 431 aa21.49■■□□□ 1.03
CACNA1A-215ENST00000635727 EIF2S2P20042 333 aaKnown RBP21.49■■□□□ 1.03
CACNA1A-215ENST00000635727 RBM19Q9Y4C8 960 aaKnown RBP21.49■■□□□ 1.03
CACNA1A-215ENST00000635727 HSP90AB2PQ58FF8 381 aa21.48■■□□□ 1.03
CACNA1A-215ENST00000635727 TPM1P09493 284 aa21.48■■□□□ 1.03
CACNA1A-215ENST00000635727 ZNF428Q96B54 188 aa21.48■■□□□ 1.03
CACNA1A-215ENST00000635727 BCL2L13Q9BXK5 485 aa21.47■■□□□ 1.03
CACNA1A-215ENST00000635727 SYNE3Q6ZMZ3 975 aa21.46■■□□□ 1.03
CACNA1A-215ENST00000635727 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
CACNA1A-215ENST00000635727 AMOTL1Q8IY63 956 aa21.46■■□□□ 1.03
CACNA1A-215ENST00000635727 CFAP44Q96MT7 982 aa21.46■■□□□ 1.03
CACNA1A-215ENST00000635727 ERCC6Q03468 1493 aa21.46■■□□□ 1.03
CACNA1A-215ENST00000635727 CLIP1P30622 1438 aa21.45■■□□□ 1.02
CACNA1A-215ENST00000635727 USP35Q9P2H5 1018 aa21.45■■□□□ 1.02
CACNA1A-215ENST00000635727 RCAN3Q9UKA8 241 aa21.44■■□□□ 1.02
CACNA1A-215ENST00000635727 NFXL1Q6ZNB6 911 aa21.44■■□□□ 1.02
CACNA1A-215ENST00000635727 HOMER1Q86YM7 354 aa21.44■■□□□ 1.02
CACNA1A-215ENST00000635727 PPM1FP49593 454 aaPredicted RBP21.44■■□□□ 1.02
CACNA1A-215ENST00000635727 TIMELESSQ9UNS1 1208 aa21.44■■□□□ 1.02
CACNA1A-215ENST00000635727 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.43■■□□□ 1.02
CACNA1A-215ENST00000635727 PHF14O94880 888 aa21.43■■□□□ 1.02
CACNA1A-215ENST00000635727 MAP7D2Q96T17 732 aa21.43■■□□□ 1.02
CACNA1A-215ENST00000635727 IKQ13123 557 aaPredicted RBP21.42■■□□□ 1.02
CACNA1A-215ENST00000635727 HSP90AA2PQ14568 343 aaPredicted RBP21.42■■□□□ 1.02
CACNA1A-215ENST00000635727 TRIM29Q14134 588 aa21.42■■□□□ 1.02
CACNA1A-215ENST00000635727 PLIN1O60240 522 aa21.41■■□□□ 1.02
CACNA1A-215ENST00000635727 ANKRD45Q5TZF3 282 aa21.41■■□□□ 1.02
CACNA1A-215ENST00000635727 CCDC27Q2M243 656 aa21.41■■□□□ 1.02
CACNA1A-215ENST00000635727 ST18O60284 1047 aa21.4■■□□□ 1.02
CACNA1A-215ENST00000635727 AK7Q96M32 723 aa21.4■■□□□ 1.02
CACNA1A-215ENST00000635727 TCERG1O14776 1098 aaKnown RBP21.4■■□□□ 1.02
CACNA1A-215ENST00000635727 EPS15P42566 896 aa21.4■■□□□ 1.02
CACNA1A-215ENST00000635727 FAM177BA6PVY3 158 aa21.39■■□□□ 1.02
CACNA1A-215ENST00000635727 HMMRO75330 724 aa21.39■■□□□ 1.02
CACNA1A-215ENST00000635727 WDR70Q9NW82 654 aa21.39■■□□□ 1.01
CACNA1A-215ENST00000635727 R3HCC1Q9Y3T6 440 aaKnown RBP21.39■■□□□ 1.01
CACNA1A-215ENST00000635727 STK11IPQ8N1F8 1099 aa21.39■■□□□ 1.01
CACNA1A-215ENST00000635727 ANO2Q9NQ90 1003 aa21.39■■□□□ 1.01
CACNA1A-215ENST00000635727 PMFBP1Q8TBY8 1022 aa21.37■■□□□ 1.01
CACNA1A-215ENST00000635727 C1orf141Q5JVX7 400 aa21.37■■□□□ 1.01
CACNA1A-215ENST00000635727 RUFY1Q96T51 708 aa21.37■■□□□ 1.01
CACNA1A-215ENST00000635727 CCDC97Q96F63 343 aaPredicted RBP21.37■■□□□ 1.01
CACNA1A-215ENST00000635727 ROCK2O75116 1388 aaKnown RBP21.37■■□□□ 1.01
CACNA1A-215ENST00000635727 KTN1Q86UP2 1357 aaKnown RBP21.37■■□□□ 1.01
CACNA1A-215ENST00000635727 CCAR1Q8IX12 1150 aaKnown RBP21.36■■□□□ 1.01
CACNA1A-215ENST00000635727 ANKRD62A6NC57 917 aa21.34■■□□□ 1.01
CACNA1A-215ENST00000635727 GPS2Q13227 327 aa21.34■■□□□ 1.01
CACNA1A-215ENST00000635727 DDX49Q9Y6V7 483 aaKnown RBP21.34■■□□□ 1.01
CACNA1A-215ENST00000635727 IPO7O95373 1038 aaKnown RBP21.34■■□□□ 1.01
CACNA1A-215ENST00000635727 PDILTQ8N807 584 aa21.33■■□□□ 1.01
CACNA1A-215ENST00000635727 CCDC180Q9P1Z9 1646 aa21.33■■□□□ 1.01
CACNA1A-215ENST00000635727 HSPA5P11021 654 aaKnown RBP21.33■■□□□ 1.01
CACNA1A-215ENST00000635727 DCAF8L1A6NGE4 600 aa21.32■■□□□ 1
CACNA1A-215ENST00000635727 BICD2Q8TD16 824 aa21.31■■□□□ 1
CACNA1A-215ENST00000635727 RBM33Q96EV2 1170 aaKnown RBP21.31■■□□□ 1
CACNA1A-215ENST00000635727 FAM13BQ9NYF5 915 aa21.3■■□□□ 1
CACNA1A-215ENST00000635727 C9orf78Q9NZ63 289 aaPredicted RBP21.3■■□□□ 1
CACNA1A-215ENST00000635727 KIF3AQ9Y496 699 aa21.29■■□□□ 1
CACNA1A-215ENST00000635727 CPLX1O14810 134 aa21.29■■□□□ 1
CACNA1A-215ENST00000635727 CHMP4CQ96CF2 233 aa21.29■■□□□ 1
CACNA1A-215ENST00000635727 CCDC47Q96A33 483 aaKnown RBP21.28■■□□□ 1
CACNA1A-215ENST00000635727 DIAPH3Q9NSV4 1193 aa21.28■■□□□ 1
CACNA1A-215ENST00000635727 EID1Q9Y6B2 187 aa21.28■■□□□ 1
CACNA1A-215ENST00000635727 CAGE1Q8TC20 777 aa21.27■■□□□ 1
CACNA1A-215ENST00000635727 CCNB3Q8WWL7 1395 aa21.27■■□□□ 1
CACNA1A-215ENST00000635727 ERICH2A1L162 156 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms