RNA–Protein interactions for RNA: ENST00000635688.1

SMARCA2-245, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-245ENST00000635688 STAC3Q96MF2 364 aa15.68■□□□□ 0.1
SMARCA2-245ENST00000635688 BBXQ8WY36 941 aaPredicted RBP15.66■□□□□ 0.1
SMARCA2-245ENST00000635688 CAMK2BQ13554 666 aa15.65■□□□□ 0.1
SMARCA2-245ENST00000635688 DPYSL4O14531 572 aa15.61■□□□□ 0.09
SMARCA2-245ENST00000635688 COL9A1P20849 921 aa15.6■□□□□ 0.09
SMARCA2-245ENST00000635688 PTPN5P54829 565 aa15.59■□□□□ 0.09
SMARCA2-245ENST00000635688 PHF14O94880 888 aa15.56■□□□□ 0.08
SMARCA2-245ENST00000635688 PROX2Q3B8N5 592 aa15.56■□□□□ 0.08
SMARCA2-245ENST00000635688 PPP1R3GB7ZBB8 358 aa15.55■□□□□ 0.08
SMARCA2-245ENST00000635688 TYW1BQ6NUM6 668 aa15.55■□□□□ 0.08
SMARCA2-245ENST00000635688 THSD4Q6ZMP0 1018 aa15.54■□□□□ 0.08
SMARCA2-245ENST00000635688 MRPL50Q8N5N7 158 aaKnown RBP15.54■□□□□ 0.08
SMARCA2-245ENST00000635688 RTN4Q9NQC3 1192 aaKnown RBP15.53■□□□□ 0.08
SMARCA2-245ENST00000635688 CUX2O14529 1486 aa15.52■□□□□ 0.07
SMARCA2-245ENST00000635688 WNT2BQ93097 391 aa15.51■□□□□ 0.07
SMARCA2-245ENST00000635688 FBXW7Q969H0 707 aa15.51■□□□□ 0.07
SMARCA2-245ENST00000635688 SPRYD3Q8NCJ5 442 aa15.5■□□□□ 0.07
SMARCA2-245ENST00000635688 GOLGA8CPA6NN73 597 aa15.47■□□□□ 0.07
SMARCA2-245ENST00000635688 AMER1Q5JTC6 1135 aaPredicted RBP15.47■□□□□ 0.07
SMARCA2-245ENST00000635688 DDX12PQ92771 950 aa15.47■□□□□ 0.07
SMARCA2-245ENST00000635688 NBPF3Q9H094 633 aa15.47■□□□□ 0.07
SMARCA2-245ENST00000635688 C6orf132Q5T0Z8 1188 aa15.46■□□□□ 0.07
SMARCA2-245ENST00000635688 RABGEF1Q9UJ41 708 aa15.46■□□□□ 0.07
SMARCA2-245ENST00000635688 RBM33Q96EV2 1170 aaKnown RBP15.43■□□□□ 0.06
SMARCA2-245ENST00000635688 EPAS1Q99814 870 aa15.43■□□□□ 0.06
SMARCA2-245ENST00000635688 KIAA1468Q9P260 1216 aa15.41■□□□□ 0.06
SMARCA2-245ENST00000635688 ERCC6Q03468 1493 aa15.4■□□□□ 0.06
SMARCA2-245ENST00000635688 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.4■□□□□ 0.06
SMARCA2-245ENST00000635688 PDIA6Q15084 440 aa15.39■□□□□ 0.05
SMARCA2-245ENST00000635688 PAXIP1Q6ZW49 1069 aaPredicted RBP15.39■□□□□ 0.05
SMARCA2-245ENST00000635688 CFAP44Q96MT7 982 aa15.38■□□□□ 0.05
SMARCA2-245ENST00000635688 BCAMP50895 628 aa15.35■□□□□ 0.05
SMARCA2-245ENST00000635688 TSR1Q2NL82 804 aaKnown RBP15.35■□□□□ 0.05
SMARCA2-245ENST00000635688 SEPT9Q9UHD8 586 aaPredicted RBP15.35■□□□□ 0.05
SMARCA2-245ENST00000635688 NBR1Q14596 966 aa15.34■□□□□ 0.05
SMARCA2-245ENST00000635688 TRIM6-TRIM34B2RNG4 842 aa15.33■□□□□ 0.04
SMARCA2-245ENST00000635688 PRIM1P49642 420 aaKnown RBP15.32■□□□□ 0.04
SMARCA2-245ENST00000635688 EN1Q05925 392 aaPredicted RBP15.32■□□□□ 0.04
SMARCA2-245ENST00000635688 E2F4Q16254 413 aa15.32■□□□□ 0.04
SMARCA2-245ENST00000635688 ANKK1Q8NFD2 765 aa15.32■□□□□ 0.04
SMARCA2-245ENST00000635688 LAPTM4BQ86VI4 370 aa15.31■□□□□ 0.04
SMARCA2-245ENST00000635688 ZFRQ96KR1 1074 aaKnown RBP15.31■□□□□ 0.04
SMARCA2-245ENST00000635688 ONECUT3O60422 494 aaPredicted RBP15.3■□□□□ 0.04
SMARCA2-245ENST00000635688 IFFO2Q5TF58 517 aa15.29■□□□□ 0.04
SMARCA2-245ENST00000635688 SOWAHBA6NEL2 793 aa15.28■□□□□ 0.04
SMARCA2-245ENST00000635688 SPDYE16A6NNV3 312 aaPredicted RBP15.28■□□□□ 0.04
SMARCA2-245ENST00000635688 MAP3K7O43318 606 aa15.28■□□□□ 0.04
SMARCA2-245ENST00000635688 NCAPD3P42695 1498 aa15.27■□□□□ 0.04
SMARCA2-245ENST00000635688 TSKSQ9UJT2 592 aa15.27■□□□□ 0.04
SMARCA2-245ENST00000635688 ARIH1Q9Y4X5 557 aaPredicted RBP15.25■□□□□ 0.03
SMARCA2-245ENST00000635688 WBP1LQ9NX94 342 aa15.23■□□□□ 0.03
SMARCA2-245ENST00000635688 FAM98CQ17RN3 349 aaKnown RBP15.22■□□□□ 0.03
SMARCA2-245ENST00000635688 FAM198AQ9UFP1 575 aa15.22■□□□□ 0.03
SMARCA2-245ENST00000635688 A0A0G2JS52 829 aa15.21■□□□□ 0.03
SMARCA2-245ENST00000635688 GRXCR2A6NFK2 248 aa15.21■□□□□ 0.03
SMARCA2-245ENST00000635688 WDR70Q9NW82 654 aa15.21■□□□□ 0.03
SMARCA2-245ENST00000635688 C3orf80F5H4A9 247 aa15.19■□□□□ 0.02
SMARCA2-245ENST00000635688 NESP48681 1621 aa15.17■□□□□ 0.02
SMARCA2-245ENST00000635688 ITGBL1O95965 494 aaPredicted RBP15.17■□□□□ 0.02
SMARCA2-245ENST00000635688 CDCA7LQ96GN5 454 aa15.17■□□□□ 0.02
SMARCA2-245ENST00000635688 ATAD2BQ9ULI0 1458 aa15.16■□□□□ 0.02
SMARCA2-245ENST00000635688 SMAPO00193 183 aa15.16■□□□□ 0.02
SMARCA2-245ENST00000635688 OSBPP22059 807 aa15.16■□□□□ 0.02
SMARCA2-245ENST00000635688 CDHR5Q9HBB8 845 aa15.16■□□□□ 0.02
SMARCA2-245ENST00000635688 PACS2Q86VP3 889 aa15.14■□□□□ 0.01
SMARCA2-245ENST00000635688 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.14■□□□□ 0.01
SMARCA2-245ENST00000635688 PRSS12P56730 875 aa15.13■□□□□ 0.01
SMARCA2-245ENST00000635688 LRCH3Q96II8 777 aa15.12■□□□□ 0.01
SMARCA2-245ENST00000635688 HPS5Q9UPZ3 1129 aa15.12■□□□□ 0.01
SMARCA2-245ENST00000635688 TSR3Q9UJK0 312 aaKnown RBP15.1■□□□□ 0.01
SMARCA2-245ENST00000635688 HMGXB3Q12766 1538 aa15.09■□□□□ 0.01
SMARCA2-245ENST00000635688 NYAP1Q6ZVC0 841 aa15.09■□□□□ 0.01
SMARCA2-245ENST00000635688 TSHZ2Q9NRE2 1034 aa15.09■□□□□ 0.01
SMARCA2-245ENST00000635688 SMARCA2P51531 1590 aa15.08■□□□□ 0
SMARCA2-245ENST00000635688 RGS20O76081 388 aa15.08■□□□□ 0
SMARCA2-245ENST00000635688 THOC2Q8NI27 1593 aaKnown RBP15.07■□□□□ 0
SMARCA2-245ENST00000635688 SAMD7Q7Z3H4 446 aa15.06■□□□□ 0
SMARCA2-245ENST00000635688 CERKQ8TCT0 537 aa15.05■□□□□ -0
SMARCA2-245ENST00000635688 TATDN2Q93075 761 aa15.05■□□□□ -0
SMARCA2-245ENST00000635688 PNMA3Q9UL41 463 aa15.04■□□□□ -0
SMARCA2-245ENST00000635688 NPDC1Q9NQX5 325 aaPredicted RBP15.03■□□□□ -0
SMARCA2-245ENST00000635688 SMARCA4P51532 1647 aa15.02□□□□□ -0.01
SMARCA2-245ENST00000635688 KCNC4Q03721 635 aa15.01□□□□□ -0.01
SMARCA2-245ENST00000635688 NUDT18Q6ZVK8 323 aa15□□□□□ -0.01
SMARCA2-245ENST00000635688 PPP4CP60510 307 aa14.99□□□□□ -0.01
SMARCA2-245ENST00000635688 BAZ1BQ9UIG0 1483 aaKnown RBP14.98□□□□□ -0.01
SMARCA2-245ENST00000635688 NBPF26B4DH59 902 aa14.98□□□□□ -0.01
SMARCA2-245ENST00000635688 MLLT3P42568 568 aaPredicted RBP14.98□□□□□ -0.01
SMARCA2-245ENST00000635688 LAMC3Q9Y6N6 1575 aa14.98□□□□□ -0.01
SMARCA2-245ENST00000635688 TTC13Q8NBP0 860 aa14.97□□□□□ -0.01
SMARCA2-245ENST00000635688 KCNV2Q8TDN2 545 aa14.97□□□□□ -0.01
SMARCA2-245ENST00000635688 PADI6Q6TGC4 694 aa14.95□□□□□ -0.02
SMARCA2-245ENST00000635688 IRX2Q9BZI1 471 aaPredicted RBP14.95□□□□□ -0.02
SMARCA2-245ENST00000635688 RBM27Q9P2N5 1060 aaKnown RBP14.95□□□□□ -0.02
SMARCA2-245ENST00000635688 KIF21AQ7Z4S6 1674 aa14.93□□□□□ -0.02
SMARCA2-245ENST00000635688 TJAP1Q5JTD0 557 aa14.93□□□□□ -0.02
SMARCA2-245ENST00000635688 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
SMARCA2-245ENST00000635688 ARHGEF1Q92888 912 aaKnown RBP14.91□□□□□ -0.02
SMARCA2-245ENST00000635688 BAZ1AQ9NRL2 1556 aaPredicted RBP14.88□□□□□ -0.03
SMARCA2-245ENST00000635688 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms