RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 POTEEQ6S8J3 1075 aa14.97□□□□□ -0.01
LINC01108-202ENST00000635227 ZNF687Q8N1G0 1237 aa14.96□□□□□ -0.01
LINC01108-202ENST00000635227 GPIHBP1Q8IV16 184 aa14.95□□□□□ -0.02
LINC01108-202ENST00000635227 NISCHQ9Y2I1 1504 aa14.94□□□□□ -0.02
LINC01108-202ENST00000635227 POTEGQ6S5H5 508 aa14.93□□□□□ -0.02
LINC01108-202ENST00000635227 AXIN2Q9Y2T1 843 aa14.93□□□□□ -0.02
LINC01108-202ENST00000635227 GPR37O15354 613 aa14.92□□□□□ -0.02
LINC01108-202ENST00000635227 PTPREP23469 700 aa14.92□□□□□ -0.02
LINC01108-202ENST00000635227 KCNK17Q96T54 332 aa14.92□□□□□ -0.02
LINC01108-202ENST00000635227 NPDC1Q9NQX5 325 aaPredicted RBP14.92□□□□□ -0.02
LINC01108-202ENST00000635227 POTEMA6NI47 508 aa14.91□□□□□ -0.02
LINC01108-202ENST00000635227 COL9A1P20849 921 aa14.91□□□□□ -0.02
LINC01108-202ENST00000635227 PSEN2P49810 448 aa14.91□□□□□ -0.02
LINC01108-202ENST00000635227 PTGDRQ13258 359 aa14.9□□□□□ -0.02
LINC01108-202ENST00000635227 ZC3H15Q8WU90 426 aaKnown RBP14.9□□□□□ -0.02
LINC01108-202ENST00000635227 ARHGAP33O14559 1287 aa14.87□□□□□ -0.03
LINC01108-202ENST00000635227 FCHSD2O94868 740 aa14.86□□□□□ -0.03
LINC01108-202ENST00000635227 TPRNQ4KMQ1 711 aa14.86□□□□□ -0.03
LINC01108-202ENST00000635227 PPP1R3GB7ZBB8 358 aa14.85□□□□□ -0.03
LINC01108-202ENST00000635227 PBX2P40425 430 aa14.85□□□□□ -0.03
LINC01108-202ENST00000635227 DMRTA1Q5VZB9 504 aa14.84□□□□□ -0.03
LINC01108-202ENST00000635227 KCNH8Q96L42 1107 aa14.83□□□□□ -0.04
LINC01108-202ENST00000635227 CERKQ8TCT0 537 aa14.82□□□□□ -0.04
LINC01108-202ENST00000635227 PRKCSHP14314 528 aaPredicted RBP14.81□□□□□ -0.04
LINC01108-202ENST00000635227 FECHP22830 423 aa14.81□□□□□ -0.04
LINC01108-202ENST00000635227 HIC1Q14526 733 aa14.81□□□□□ -0.04
LINC01108-202ENST00000635227 GNPATO15228 680 aa14.79□□□□□ -0.04
LINC01108-202ENST00000635227 ZMYND10O75800 440 aa14.79□□□□□ -0.04
LINC01108-202ENST00000635227 PROX2Q3B8N5 592 aa14.78□□□□□ -0.04
LINC01108-202ENST00000635227 CDCA7LQ96GN5 454 aa14.78□□□□□ -0.04
LINC01108-202ENST00000635227 ZBED2Q9BTP6 218 aa14.78□□□□□ -0.04
LINC01108-202ENST00000635227 PRSS12P56730 875 aa14.77□□□□□ -0.05
LINC01108-202ENST00000635227 CDAN1Q8IWY9 1227 aa14.77□□□□□ -0.05
LINC01108-202ENST00000635227 KRTAP3-3Q9BYR6 98 aa14.77□□□□□ -0.05
LINC01108-202ENST00000635227 KRTAP3-2Q9BYR7 98 aa14.77□□□□□ -0.05
LINC01108-202ENST00000635227 PADI6Q6TGC4 694 aa14.76□□□□□ -0.05
LINC01108-202ENST00000635227 LSM11P83369 360 aaKnown RBP eCLIP14.75□□□□□ -0.05
LINC01108-202ENST00000635227 BARGINQ6ZT62 677 aa14.75□□□□□ -0.05
LINC01108-202ENST00000635227 FAM198AQ9UFP1 575 aa14.75□□□□□ -0.05
LINC01108-202ENST00000635227 TSKSQ9UJT2 592 aa14.74□□□□□ -0.05
LINC01108-202ENST00000635227 RBM27Q9P2N5 1060 aaKnown RBP14.73□□□□□ -0.05
LINC01108-202ENST00000635227 TRIM6-TRIM34B2RNG4 842 aa14.72□□□□□ -0.05
LINC01108-202ENST00000635227 TTC13Q8NBP0 860 aa14.72□□□□□ -0.05
LINC01108-202ENST00000635227 VPS9D1Q9Y2B5 631 aa14.71□□□□□ -0.05
LINC01108-202ENST00000635227 ANKRD13DQ6ZTN6 518 aa14.7□□□□□ -0.06
LINC01108-202ENST00000635227 SLC4A5Q9BY07 1137 aa14.7□□□□□ -0.06
LINC01108-202ENST00000635227 FAM161AQ3B820 660 aa14.68□□□□□ -0.06
LINC01108-202ENST00000635227 KRI1Q8N9T8 703 aaKnown RBP14.68□□□□□ -0.06
LINC01108-202ENST00000635227 C3orf80F5H4A9 247 aa14.67□□□□□ -0.06
LINC01108-202ENST00000635227 MAP2K5Q13163 448 aa14.67□□□□□ -0.06
LINC01108-202ENST00000635227 ADGRD1Q6QNK2 874 aa14.67□□□□□ -0.06
LINC01108-202ENST00000635227 TK2O00142 265 aa14.66□□□□□ -0.06
LINC01108-202ENST00000635227 SLC24A3Q9HC58 644 aa14.66□□□□□ -0.06
LINC01108-202ENST00000635227 KIAA1468Q9P260 1216 aa14.66□□□□□ -0.06
LINC01108-202ENST00000635227 IRF6O14896 467 aa14.64□□□□□ -0.07
LINC01108-202ENST00000635227 ONECUT3O60422 494 aaPredicted RBP14.64□□□□□ -0.07
LINC01108-202ENST00000635227 RABGEF1Q9UJ41 708 aa14.64□□□□□ -0.07
LINC01108-202ENST00000635227 ADGRG1Q9Y653 693 aa14.64□□□□□ -0.07
LINC01108-202ENST00000635227 MINK1Q8N4C8 1332 aaPredicted RBP14.64□□□□□ -0.07
LINC01108-202ENST00000635227 PACS2Q86VP3 889 aa14.63□□□□□ -0.07
LINC01108-202ENST00000635227 CCDC102AQ96A19 550 aa14.62□□□□□ -0.07
LINC01108-202ENST00000635227 NUDT18Q6ZVK8 323 aa14.61□□□□□ -0.07
LINC01108-202ENST00000635227 BHMG1C9JSJ3 638 aaPredicted RBP14.6□□□□□ -0.07
LINC01108-202ENST00000635227 SMAPO00193 183 aa14.6□□□□□ -0.07
LINC01108-202ENST00000635227 HRO43593 1189 aa14.6□□□□□ -0.07
LINC01108-202ENST00000635227 TATDN2Q93075 761 aa14.6□□□□□ -0.07
LINC01108-202ENST00000635227 PNMA3Q9UL41 463 aa14.6□□□□□ -0.07
LINC01108-202ENST00000635227 NBPF26B4DH59 902 aa14.58□□□□□ -0.08
LINC01108-202ENST00000635227 SEPT9Q9UHD8 586 aaPredicted RBP14.58□□□□□ -0.08
LINC01108-202ENST00000635227 METTL3Q86U44 580 aaKnown RBP14.56□□□□□ -0.08
LINC01108-202ENST00000635227 PHOX2BQ99453 314 aa14.56□□□□□ -0.08
LINC01108-202ENST00000635227 EYA1Q99502 592 aa14.56□□□□□ -0.08
LINC01108-202ENST00000635227 OATP04181 439 aa14.55□□□□□ -0.08
LINC01108-202ENST00000635227 PXYLP1Q8TE99 480 aa14.55□□□□□ -0.08
LINC01108-202ENST00000635227 AK7Q96M32 723 aa14.55□□□□□ -0.08
LINC01108-202ENST00000635227 RBM46Q8TBY0 533 aaKnown RBP14.54□□□□□ -0.08
LINC01108-202ENST00000635227 NBPF3Q9H094 633 aa14.54□□□□□ -0.08
LINC01108-202ENST00000635227 PCDH10Q9P2E7 1040 aa14.54□□□□□ -0.08
LINC01108-202ENST00000635227 TRIM66O15016 1216 aa14.51□□□□□ -0.09
LINC01108-202ENST00000635227 MRPL50Q8N5N7 158 aaKnown RBP14.51□□□□□ -0.09
LINC01108-202ENST00000635227 NLRP7Q8WX94 980 aa14.51□□□□□ -0.09
LINC01108-202ENST00000635227 FAM98CQ17RN3 349 aaKnown RBP14.49□□□□□ -0.09
LINC01108-202ENST00000635227 RCCD1A6NED2 376 aa14.48□□□□□ -0.09
LINC01108-202ENST00000635227 LAPTM4BQ86VI4 370 aa14.48□□□□□ -0.09
LINC01108-202ENST00000635227 STAC3Q96MF2 364 aa14.47□□□□□ -0.09
LINC01108-202ENST00000635227 DNAJB2P25686 324 aa14.44□□□□□ -0.1
LINC01108-202ENST00000635227 ZFRQ96KR1 1074 aaKnown RBP14.44□□□□□ -0.1
LINC01108-202ENST00000635227 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.43□□□□□ -0.1
LINC01108-202ENST00000635227 AMHR2Q16671 573 aa14.43□□□□□ -0.1
LINC01108-202ENST00000635227 PDE4DQ08499 809 aa14.42□□□□□ -0.1
LINC01108-202ENST00000635227 MDM2Q00987 491 aaPredicted RBP14.41□□□□□ -0.1
LINC01108-202ENST00000635227 TMEM134Q9H6X4 195 aa14.41□□□□□ -0.1
LINC01108-202ENST00000635227 REPIN1Q9BWE0 567 aaKnown RBP14.4□□□□□ -0.1
LINC01108-202ENST00000635227 ABCC9O60706 1549 aa14.4□□□□□ -0.1
LINC01108-202ENST00000635227 GOLGA8CPA6NN73 597 aa14.39□□□□□ -0.11
LINC01108-202ENST00000635227 SWT1Q5T5J6 900 aaKnown RBP14.39□□□□□ -0.11
LINC01108-202ENST00000635227 SAMD7Q7Z3H4 446 aa14.39□□□□□ -0.11
LINC01108-202ENST00000635227 SPNS2Q8IVW8 549 aa14.39□□□□□ -0.11
LINC01108-202ENST00000635227 TTLL12Q14166 644 aaPredicted RBP14.37□□□□□ -0.11
LINC01108-202ENST00000635227 PARP9Q8IXQ6 854 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms