RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 FHOD3Q2V2M9 1422 aa14.5□□□□□ -0.09
COL11A1-211ENST00000635193 ST20-MTHFSA0A0A6YYL1 179 aa14.5□□□□□ -0.09
COL11A1-211ENST00000635193 CSPP1Q1MSJ5 1256 aa14.5□□□□□ -0.09
COL11A1-211ENST00000635193 A0A0U1RQG5 324 aaPredicted RBP14.5□□□□□ -0.09
COL11A1-211ENST00000635193 WIZO95785 1651 aa14.49□□□□□ -0.09
COL11A1-211ENST00000635193 TOP2AP11388 1531 aaKnown RBP14.49□□□□□ -0.09
COL11A1-211ENST00000635193 TRIM6-TRIM34B2RNG4 842 aa14.49□□□□□ -0.09
COL11A1-211ENST00000635193 SETQ01105 290 aaPredicted RBP14.49□□□□□ -0.09
COL11A1-211ENST00000635193 HMMRO75330 724 aa14.48□□□□□ -0.09
COL11A1-211ENST00000635193 NOC3LQ8WTT2 800 aaKnown RBP14.48□□□□□ -0.09
COL11A1-211ENST00000635193 NOL8Q76FK4 1167 aaKnown RBP14.48□□□□□ -0.09
COL11A1-211ENST00000635193 SMARCA2P51531 1590 aa14.48□□□□□ -0.09
COL11A1-211ENST00000635193 PANK3Q9H999 370 aa14.47□□□□□ -0.09
COL11A1-211ENST00000635193 CGNL1Q0VF96 1302 aa14.46□□□□□ -0.1
COL11A1-211ENST00000635193 E9PSI1 815 aa14.45□□□□□ -0.1
COL11A1-211ENST00000635193 FOXD4L5Q5VV16 416 aaPredicted RBP14.45□□□□□ -0.1
COL11A1-211ENST00000635193 FOXD4L4Q8WXT5 416 aaPredicted RBP14.45□□□□□ -0.1
COL11A1-211ENST00000635193 STK31Q9BXU1 1019 aa14.44□□□□□ -0.1
COL11A1-211ENST00000635193 RUSC2Q8N2Y8 1516 aa14.44□□□□□ -0.1
COL11A1-211ENST00000635193 IL27Q8NEV9 243 aa14.44□□□□□ -0.1
COL11A1-211ENST00000635193 RRP7AQ9Y3A4 280 aaKnown RBP14.44□□□□□ -0.1
COL11A1-211ENST00000635193 CCDC18Q5T9S5 1454 aa14.44□□□□□ -0.1
COL11A1-211ENST00000635193 USP47Q96K76 1375 aa14.44□□□□□ -0.1
COL11A1-211ENST00000635193 NFKBIBQ15653 356 aa14.44□□□□□ -0.1
COL11A1-211ENST00000635193 MAP7D2Q96T17 732 aa14.44□□□□□ -0.1
COL11A1-211ENST00000635193 GGT6Q6P531 493 aa14.44□□□□□ -0.1
COL11A1-211ENST00000635193 COG6Q9Y2V7 657 aa14.43□□□□□ -0.1
COL11A1-211ENST00000635193 BCL2L13Q9BXK5 485 aa14.43□□□□□ -0.1
COL11A1-211ENST00000635193 HDGFP51858 240 aaKnown RBP14.43□□□□□ -0.1
COL11A1-211ENST00000635193 CARMIL2Q6F5E8 1435 aa14.42□□□□□ -0.1
COL11A1-211ENST00000635193 MTERF4Q7Z6M4 381 aaKnown RBP14.42□□□□□ -0.1
COL11A1-211ENST00000635193 ZKSCAN2Q63HK3 967 aa14.42□□□□□ -0.1
COL11A1-211ENST00000635193 PODXL2Q9NZ53 605 aa14.42□□□□□ -0.1
COL11A1-211ENST00000635193 BRPF3Q9ULD4 1205 aa14.42□□□□□ -0.1
COL11A1-211ENST00000635193 SPAG9O60271 1321 aaKnown RBP14.41□□□□□ -0.1
COL11A1-211ENST00000635193 GPATCH3Q96I76 525 aa14.41□□□□□ -0.1
COL11A1-211ENST00000635193 SLC4A10Q6U841 1118 aa14.41□□□□□ -0.1
COL11A1-211ENST00000635193 ANKRD45Q5TZF3 282 aa14.41□□□□□ -0.1
COL11A1-211ENST00000635193 TERF2IPQ9NYB0 399 aa14.41□□□□□ -0.1
COL11A1-211ENST00000635193 CHMP5Q9NZZ3 219 aa14.4□□□□□ -0.1
COL11A1-211ENST00000635193 HSP90B1P14625 803 aaKnown RBP14.4□□□□□ -0.1
COL11A1-211ENST00000635193 GPS2Q13227 327 aa14.4□□□□□ -0.1
COL11A1-211ENST00000635193 HNRNPMP52272 730 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL11A1-211ENST00000635193 KIF16BQ96L93 1317 aa14.39□□□□□ -0.11
COL11A1-211ENST00000635193 TDRD9Q8NDG6 1382 aaKnown RBP14.39□□□□□ -0.11
COL11A1-211ENST00000635193 LMOD3Q0VAK6 560 aa14.39□□□□□ -0.11
COL11A1-211ENST00000635193 TPM2P07951 284 aa14.39□□□□□ -0.11
COL11A1-211ENST00000635193 TEX35Q5T0J7 233 aa14.39□□□□□ -0.11
COL11A1-211ENST00000635193 ATAD2BQ9ULI0 1458 aa14.37□□□□□ -0.11
COL11A1-211ENST00000635193 CHMP4AQ9BY43 222 aa14.37□□□□□ -0.11
COL11A1-211ENST00000635193 MRE11P49959 708 aa14.37□□□□□ -0.11
COL11A1-211ENST00000635193 CCDC7Q96M83 1385 aa14.37□□□□□ -0.11
COL11A1-211ENST00000635193 APAF1O14727 1248 aa14.37□□□□□ -0.11
COL11A1-211ENST00000635193 EFCAB2Q5VUJ9 269 aa14.37□□□□□ -0.11
COL11A1-211ENST00000635193 CCDC144AA2RUR9 1427 aa14.37□□□□□ -0.11
COL11A1-211ENST00000635193 CNTLNQ9NXG0 1405 aa14.37□□□□□ -0.11
COL11A1-211ENST00000635193 R3HCC1Q9Y3T6 440 aaKnown RBP14.36□□□□□ -0.11
COL11A1-211ENST00000635193 NPHP1O15259 732 aa14.36□□□□□ -0.11
COL11A1-211ENST00000635193 TPM3P06753 285 aa14.36□□□□□ -0.11
COL11A1-211ENST00000635193 ZNF592Q92610 1267 aa14.36□□□□□ -0.11
COL11A1-211ENST00000635193 PDS5BQ9NTI5 1447 aa14.36□□□□□ -0.11
COL11A1-211ENST00000635193 HDAC5Q9UQL6 1122 aa14.35□□□□□ -0.11
COL11A1-211ENST00000635193 RSPH4AQ5TD94 716 aa14.35□□□□□ -0.11
COL11A1-211ENST00000635193 ATP6V1DQ9Y5K8 247 aa14.35□□□□□ -0.11
COL11A1-211ENST00000635193 CCDC34Q96HJ3 373 aa14.34□□□□□ -0.11
COL11A1-211ENST00000635193 KIF7Q2M1P5 1343 aa14.34□□□□□ -0.11
COL11A1-211ENST00000635193 FOXD4L6Q3SYB3 417 aaPredicted RBP14.34□□□□□ -0.11
COL11A1-211ENST00000635193 FOXD4L3Q6VB84 417 aaPredicted RBP14.34□□□□□ -0.11
COL11A1-211ENST00000635193 GOLGA6L19H0YKK7 550 aa14.34□□□□□ -0.11
COL11A1-211ENST00000635193 CCAR2Q8N163 923 aaKnown RBP14.34□□□□□ -0.11
COL11A1-211ENST00000635193 MLECQ14165 292 aa14.33□□□□□ -0.12
COL11A1-211ENST00000635193 DDX19BQ9UMR2 479 aa14.33□□□□□ -0.12
COL11A1-211ENST00000635193 KIF3BO15066 747 aa14.33□□□□□ -0.12
COL11A1-211ENST00000635193 RILPL2Q969X0 211 aa14.33□□□□□ -0.12
COL11A1-211ENST00000635193 SMARCA4P51532 1647 aa14.32□□□□□ -0.12
COL11A1-211ENST00000635193 ELL2O00472 640 aaPredicted RBP14.31□□□□□ -0.12
COL11A1-211ENST00000635193 NGEFQ8N5V2 710 aa14.31□□□□□ -0.12
COL11A1-211ENST00000635193 TRAK1Q9UPV9 953 aa14.31□□□□□ -0.12
COL11A1-211ENST00000635193 KIF3AQ9Y496 699 aa14.31□□□□□ -0.12
COL11A1-211ENST00000635193 BECN2A8MW95 431 aa14.31□□□□□ -0.12
COL11A1-211ENST00000635193 CADPSQ9ULU8 1353 aa14.31□□□□□ -0.12
COL11A1-211ENST00000635193 DZIP1LQ8IYY4 767 aaKnown RBP14.3□□□□□ -0.12
COL11A1-211ENST00000635193 NOM1Q5C9Z4 860 aaKnown RBP14.3□□□□□ -0.12
COL11A1-211ENST00000635193 SF3A1Q15459 793 aaKnown RBP14.3□□□□□ -0.12
COL11A1-211ENST00000635193 REC8O95072 547 aa14.29□□□□□ -0.12
COL11A1-211ENST00000635193 CALRP27797 417 aaKnown RBP14.29□□□□□ -0.12
COL11A1-211ENST00000635193 GORABQ5T7V8 394 aa14.29□□□□□ -0.12
COL11A1-211ENST00000635193 PAK3O75914 559 aaPredicted RBP14.29□□□□□ -0.12
COL11A1-211ENST00000635193 C22orf23Q9BZE7 217 aa14.29□□□□□ -0.12
COL11A1-211ENST00000635193 CCDC66A2RUB6 948 aa14.29□□□□□ -0.12
COL11A1-211ENST00000635193 NASPP49321 788 aaPredicted RBP14.29□□□□□ -0.12
COL11A1-211ENST00000635193 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.29□□□□□ -0.12
COL11A1-211ENST00000635193 WASHC2AQ641Q2 1341 aa14.29□□□□□ -0.12
COL11A1-211ENST00000635193 DIAPH3Q9NSV4 1193 aa14.28□□□□□ -0.12
COL11A1-211ENST00000635193 H3BQV1 296 aa14.28□□□□□ -0.12
COL11A1-211ENST00000635193 IFFO2Q5TF58 517 aa14.28□□□□□ -0.12
COL11A1-211ENST00000635193 UACAQ9BZF9 1416 aa14.28□□□□□ -0.12
COL11A1-211ENST00000635193 CHMP3Q9Y3E7 222 aa14.28□□□□□ -0.12
COL11A1-211ENST00000635193 CCDC39Q9UFE4 941 aa14.28□□□□□ -0.12
COL11A1-211ENST00000635193 RRP9O43818 475 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms