RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-223	ENST00000630866	RALBP1	Q15311	655 aa		10.86	□□□□□ -0.67
SPTAN1-223	ENST00000630866	SLC4A10	Q6U841	1118 aa		10.86	□□□□□ -0.67
SPTAN1-223	ENST00000630866	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.86	□□□□□ -0.67
SPTAN1-223	ENST00000630866	FGD5	Q6ZNL6	1462 aa		10.85	□□□□□ -0.67
SPTAN1-223	ENST00000630866	ITPRIP	Q8IWB1	547 aa		10.85	□□□□□ -0.67
SPTAN1-223	ENST00000630866	TTC5	Q8N0Z6	440 aa		10.85	□□□□□ -0.67
SPTAN1-223	ENST00000630866	TEF	Q10587	303 aa		10.84	□□□□□ -0.67
SPTAN1-223	ENST00000630866	GOLGA6L6	A8MZA4	724 aa		10.84	□□□□□ -0.67
SPTAN1-223	ENST00000630866	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.84	□□□□□ -0.67
SPTAN1-223	ENST00000630866	AQR	O60306	1485 aa	Known RBP eCLIP	10.84	□□□□□ -0.67	3e-7	■■■□□ 18.7
SPTAN1-223	ENST00000630866	CNKSR2	Q8WXI2	1034 aa		10.84	□□□□□ -0.67
SPTAN1-223	ENST00000630866	FBXO3	Q9UK99	471 aa		10.84	□□□□□ -0.67
SPTAN1-223	ENST00000630866	PLCB2	Q00722	1185 aa		10.83	□□□□□ -0.68
SPTAN1-223	ENST00000630866	RAD54L2	Q9Y4B4	1467 aa		10.83	□□□□□ -0.68
SPTAN1-223	ENST00000630866	HMMR	O75330	724 aa		10.82	□□□□□ -0.68
SPTAN1-223	ENST00000630866	SMC4	Q9NTJ3	1288 aa		10.82	□□□□□ -0.68
SPTAN1-223	ENST00000630866	L3MBTL2	Q969R5	705 aa		10.82	□□□□□ -0.68
SPTAN1-223	ENST00000630866	NRDC	O43847	1150 aa		10.81	□□□□□ -0.68
SPTAN1-223	ENST00000630866	ERICH6B	Q5W0A0	696 aa		10.81	□□□□□ -0.68
SPTAN1-223	ENST00000630866	CGNL1	Q0VF96	1302 aa		10.8	□□□□□ -0.68
SPTAN1-223	ENST00000630866	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.8	□□□□□ -0.68
SPTAN1-223	ENST00000630866	HSCB	Q8IWL3	235 aa		10.8	□□□□□ -0.68
SPTAN1-223	ENST00000630866	NGEF	Q8N5V2	710 aa		10.8	□□□□□ -0.68
SPTAN1-223	ENST00000630866	PPP4R2	Q9NY27	417 aa		10.79	□□□□□ -0.68
SPTAN1-223	ENST00000630866	B4GALNT3	Q6L9W6	998 aa		10.79	□□□□□ -0.68
SPTAN1-223	ENST00000630866	TRIM6-TRIM34	B2RNG4	842 aa		10.78	□□□□□ -0.68
SPTAN1-223	ENST00000630866	L1TD1	Q5T7N2	865 aa	Known RBP	10.78	□□□□□ -0.68
SPTAN1-223	ENST00000630866	PROSER2	Q86WR7	435 aa	Predicted RBP	10.78	□□□□□ -0.68
SPTAN1-223	ENST00000630866	CCDC146	Q8IYE0	955 aa		10.78	□□□□□ -0.68
SPTAN1-223	ENST00000630866	TOMM22	Q9NS69	142 aa		10.78	□□□□□ -0.68
SPTAN1-223	ENST00000630866	TRIM34	Q9BYJ4	488 aa		10.78	□□□□□ -0.68
SPTAN1-223	ENST00000630866	PIP4K2B	P78356	416 aa		10.78	□□□□□ -0.68
SPTAN1-223	ENST00000630866	GRIN2B	Q13224	1484 aa		10.78	□□□□□ -0.68
SPTAN1-223	ENST00000630866	RAPGEF4	Q8WZA2	1011 aa		10.78	□□□□□ -0.68
SPTAN1-223	ENST00000630866	NOL10	Q9BSC4	688 aa	Known RBP	10.77	□□□□□ -0.68
SPTAN1-223	ENST00000630866	NEXN	Q0ZGT2	675 aa		10.77	□□□□□ -0.69
SPTAN1-223	ENST00000630866	RWDD1	Q9H446	243 aa	Predicted RBP	10.77	□□□□□ -0.69
SPTAN1-223	ENST00000630866	CC2D2A	Q9P2K1	1620 aa		10.77	□□□□□ -0.69
SPTAN1-223	ENST00000630866	TXNDC2	Q86VQ3	553 aa		10.77	□□□□□ -0.69
SPTAN1-223	ENST00000630866	MRC2	Q9UBG0	1479 aa		10.76	□□□□□ -0.69
SPTAN1-223	ENST00000630866	ARHGAP5	Q13017	1502 aa		10.76	□□□□□ -0.69
SPTAN1-223	ENST00000630866	VPS53	Q5VIR6	699 aa		10.76	□□□□□ -0.69
SPTAN1-223	ENST00000630866	DHX57	Q6P158	1386 aa	Known RBP	10.76	□□□□□ -0.69
SPTAN1-223	ENST00000630866	CHAF1A	Q13111	956 aa	Predicted RBP	10.75	□□□□□ -0.69
SPTAN1-223	ENST00000630866	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.75	□□□□□ -0.69
SPTAN1-223	ENST00000630866	FBXW7	Q969H0	707 aa		10.75	□□□□□ -0.69
SPTAN1-223	ENST00000630866	PRG4	Q92954	1404 aa	Predicted RBP	10.75	□□□□□ -0.69
SPTAN1-223	ENST00000630866	NCAPD3	P42695	1498 aa		10.75	□□□□□ -0.69
SPTAN1-223	ENST00000630866	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.75	□□□□□ -0.69
SPTAN1-223	ENST00000630866	HSP90B1	P14625	803 aa	Known RBP	10.75	□□□□□ -0.69
SPTAN1-223	ENST00000630866	NLRP2	Q9NX02	1062 aa		10.74	□□□□□ -0.69
SPTAN1-223	ENST00000630866	VPS37D	Q86XT2	251 aa		10.74	□□□□□ -0.69
SPTAN1-223	ENST00000630866	ST20-MTHFS	A0A0A6YYL1	179 aa		10.74	□□□□□ -0.69
SPTAN1-223	ENST00000630866	EIF2S2	P20042	333 aa	Known RBP	10.74	□□□□□ -0.69
SPTAN1-223	ENST00000630866	AMOTL1	Q8IY63	956 aa		10.74	□□□□□ -0.69
SPTAN1-223	ENST00000630866	CCER2	I3L3R5	266 aa		10.74	□□□□□ -0.69
SPTAN1-223	ENST00000630866	GPRASP1	Q5JY77	1395 aa		10.74	□□□□□ -0.69
SPTAN1-223	ENST00000630866	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.74	□□□□□ -0.69
SPTAN1-223	ENST00000630866	NUTM2E	B1AL46	878 aa	Predicted RBP	10.74	□□□□□ -0.69
SPTAN1-223	ENST00000630866	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.74	□□□□□ -0.69
SPTAN1-223	ENST00000630866	PANK3	Q9H999	370 aa		10.74	□□□□□ -0.69
SPTAN1-223	ENST00000630866	MARCH6	O60337	910 aa		10.73	□□□□□ -0.69
SPTAN1-223	ENST00000630866	ESCO1	Q5FWF5	840 aa		10.73	□□□□□ -0.69
SPTAN1-223	ENST00000630866	NLRP13	Q86W25	1043 aa		10.73	□□□□□ -0.69
SPTAN1-223	ENST00000630866	USP35	Q9P2H5	1018 aa		10.73	□□□□□ -0.69
SPTAN1-223	ENST00000630866	SYNJ2	O15056	1496 aa		10.73	□□□□□ -0.69
SPTAN1-223	ENST00000630866	MYOM3	Q5VTT5	1437 aa		10.73	□□□□□ -0.69
SPTAN1-223	ENST00000630866	POGZ	Q7Z3K3	1410 aa		10.73	□□□□□ -0.69
SPTAN1-223	ENST00000630866	RCAN3	Q9UKA8	241 aa		10.73	□□□□□ -0.69
SPTAN1-223	ENST00000630866	CWC22	Q9HCG8	908 aa	Known RBP	10.73	□□□□□ -0.69
SPTAN1-223	ENST00000630866	WASHC2A	Q641Q2	1341 aa		10.72	□□□□□ -0.69
SPTAN1-223	ENST00000630866	KIF15	Q9NS87	1388 aa		10.72	□□□□□ -0.69
SPTAN1-223	ENST00000630866	NUTM2G	Q5VZR2	741 aa		10.72	□□□□□ -0.69
SPTAN1-223	ENST00000630866	RASSF8	Q8NHQ8	419 aa		10.72	□□□□□ -0.69
SPTAN1-223	ENST00000630866	PMFBP1	Q8TBY8	1022 aa		10.72	□□□□□ -0.69
SPTAN1-223	ENST00000630866	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.72	□□□□□ -0.69
SPTAN1-223	ENST00000630866	IGF1R	P08069	1367 aa		10.72	□□□□□ -0.69
SPTAN1-223	ENST00000630866	RBM33	Q96EV2	1170 aa	Known RBP	10.72	□□□□□ -0.69
SPTAN1-223	ENST00000630866	RRP7A	Q9Y3A4	280 aa	Known RBP	10.72	□□□□□ -0.69
SPTAN1-223	ENST00000630866	ELL2	O00472	640 aa	Predicted RBP	10.71	□□□□□ -0.69
SPTAN1-223	ENST00000630866	DDX58	O95786	925 aa	Known RBP	10.71	□□□□□ -0.69
SPTAN1-223	ENST00000630866	PDE4C	Q08493	712 aa		10.71	□□□□□ -0.69
SPTAN1-223	ENST00000630866	WDR70	Q9NW82	654 aa		10.71	□□□□□ -0.69
SPTAN1-223	ENST00000630866	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.71	□□□□□ -0.69
SPTAN1-223	ENST00000630866	HTATSF1	O43719	755 aa	Known RBP	10.71	□□□□□ -0.69
SPTAN1-223	ENST00000630866	AFAP1	Q8N556	730 aa		10.71	□□□□□ -0.69
SPTAN1-223	ENST00000630866	IFT140	Q96RY7	1462 aa		10.71	□□□□□ -0.69
SPTAN1-223	ENST00000630866	RAD21	O60216	631 aa		10.71	□□□□□ -0.69
SPTAN1-223	ENST00000630866	CLUAP1	Q96AJ1	413 aa		10.71	□□□□□ -0.69
SPTAN1-223	ENST00000630866	CCDC34	Q96HJ3	373 aa		10.71	□□□□□ -0.69
SPTAN1-223	ENST00000630866	KAT6B	Q8WYB5	2073 aa		10.71	□□□□□ -0.7
SPTAN1-223	ENST00000630866	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.71	□□□□□ -0.7
SPTAN1-223	ENST00000630866	PHLDB1	Q86UU1	1377 aa		10.7	□□□□□ -0.7
SPTAN1-223	ENST00000630866	NLRP6	P59044	892 aa		10.7	□□□□□ -0.7
SPTAN1-223	ENST00000630866	KIAA2012	Q0VF49	1180 aa		10.7	□□□□□ -0.7
SPTAN1-223	ENST00000630866	ANKLE2	Q86XL3	938 aa		10.7	□□□□□ -0.7
SPTAN1-223	ENST00000630866	TNNT3	P45378	269 aa	Predicted RBP	10.7	□□□□□ -0.7
SPTAN1-223	ENST00000630866	NOC3L	Q8WTT2	800 aa	Known RBP	10.7	□□□□□ -0.7
SPTAN1-223	ENST00000630866	STRN4	Q9NRL3	753 aa		10.7	□□□□□ -0.7
SPTAN1-223	ENST00000630866	DIAPH1	O60610	1272 aa	Known RBP	10.7	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms