RNA–Protein interactions for RNA: ENST00000630712.2

TCF4-272, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-272ENST00000630712 NBPF3Q9H094 633 aa8.58□□□□□ -1.04
TCF4-272ENST00000630712 RGS20O76081 388 aa8.57□□□□□ -1.04
TCF4-272ENST00000630712 PRKCSHP14314 528 aaPredicted RBP8.57□□□□□ -1.04
TCF4-272ENST00000630712 COL9A1P20849 921 aa8.57□□□□□ -1.04
TCF4-272ENST00000630712 PPP1R3GB7ZBB8 358 aa8.56□□□□□ -1.04
TCF4-272ENST00000630712 TYW1BQ6NUM6 668 aa8.53□□□□□ -1.04
TCF4-272ENST00000630712 RABGEF1Q9UJ41 708 aa8.53□□□□□ -1.04
TCF4-272ENST00000630712 PHF14O94880 888 aa8.51□□□□□ -1.05
TCF4-272ENST00000630712 BCAMP50895 628 aa8.51□□□□□ -1.05
TCF4-272ENST00000630712 ANKK1Q8NFD2 765 aa8.51□□□□□ -1.05
TCF4-272ENST00000630712 DPYSL4O14531 572 aa8.5□□□□□ -1.05
TCF4-272ENST00000630712 FBXW7Q969H0 707 aa8.5□□□□□ -1.05
TCF4-272ENST00000630712 KIAA1468Q9P260 1216 aa8.5□□□□□ -1.05
TCF4-272ENST00000630712 RBM33Q96EV2 1170 aaKnown RBP8.49□□□□□ -1.05
TCF4-272ENST00000630712 C6orf132Q5T0Z8 1188 aa8.48□□□□□ -1.05
TCF4-272ENST00000630712 SEPT9Q9UHD8 586 aaPredicted RBP8.48□□□□□ -1.05
TCF4-272ENST00000630712 Q6ZNB5 142 aa8.47□□□□□ -1.05
TCF4-272ENST00000630712 ZFRQ96KR1 1074 aaKnown RBP8.47□□□□□ -1.05
TCF4-272ENST00000630712 NISCHQ9Y2I1 1504 aa8.46□□□□□ -1.05
TCF4-272ENST00000630712 DDX12PQ92771 950 aa8.46□□□□□ -1.06
TCF4-272ENST00000630712 EPAS1Q99814 870 aa8.46□□□□□ -1.06
TCF4-272ENST00000630712 SOWAHBA6NEL2 793 aa8.45□□□□□ -1.06
TCF4-272ENST00000630712 ITGBL1O95965 494 aaPredicted RBP8.45□□□□□ -1.06
TCF4-272ENST00000630712 CAMK2BQ13554 666 aa8.45□□□□□ -1.06
TCF4-272ENST00000630712 ERICH6Q7L0X2 663 aa8.45□□□□□ -1.06
TCF4-272ENST00000630712 LAPTM4BQ86VI4 370 aa8.44□□□□□ -1.06
TCF4-272ENST00000630712 WBP1LQ9NX94 342 aa8.44□□□□□ -1.06
TCF4-272ENST00000630712 TRIM6-TRIM34B2RNG4 842 aa8.42□□□□□ -1.06
TCF4-272ENST00000630712 ONECUT3O60422 494 aaPredicted RBP8.41□□□□□ -1.06
TCF4-272ENST00000630712 LCE2BO14633 110 aa8.39□□□□□ -1.07
TCF4-272ENST00000630712 NBR1Q14596 966 aa8.39□□□□□ -1.07
TCF4-272ENST00000630712 FAM98CQ17RN3 349 aaKnown RBP8.39□□□□□ -1.07
TCF4-272ENST00000630712 TSR1Q2NL82 804 aaKnown RBP8.39□□□□□ -1.07
TCF4-272ENST00000630712 HPS5Q9UPZ3 1129 aa8.39□□□□□ -1.07
TCF4-272ENST00000630712 MAP3K7O43318 606 aa8.38□□□□□ -1.07
TCF4-272ENST00000630712 KCNC4Q03721 635 aa8.38□□□□□ -1.07
TCF4-272ENST00000630712 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.38□□□□□ -1.07
TCF4-272ENST00000630712 TSKSQ9UJT2 592 aa8.38□□□□□ -1.07
TCF4-272ENST00000630712 LRCH3Q96II8 777 aa8.37□□□□□ -1.07
TCF4-272ENST00000630712 EN1Q05925 392 aaPredicted RBP8.36□□□□□ -1.07
TCF4-272ENST00000630712 NYAP1Q6ZVC0 841 aa8.36□□□□□ -1.07
TCF4-272ENST00000630712 TSR3Q9UJK0 312 aaKnown RBP8.36□□□□□ -1.07
TCF4-272ENST00000630712 SMAPO00193 183 aa8.35□□□□□ -1.07
TCF4-272ENST00000630712 BBXQ8WY36 941 aaPredicted RBP8.35□□□□□ -1.07
TCF4-272ENST00000630712 PACS2Q86VP3 889 aa8.34□□□□□ -1.07
TCF4-272ENST00000630712 PDIA6Q15084 440 aa8.33□□□□□ -1.08
TCF4-272ENST00000630712 GRXCR2A6NFK2 248 aa8.32□□□□□ -1.08
TCF4-272ENST00000630712 PRIM1P49642 420 aaKnown RBP8.31□□□□□ -1.08
TCF4-272ENST00000630712 PPP4CP60510 307 aa8.31□□□□□ -1.08
TCF4-272ENST00000630712 SAMD7Q7Z3H4 446 aa8.31□□□□□ -1.08
TCF4-272ENST00000630712 SPRYD3Q8NCJ5 442 aa8.31□□□□□ -1.08
TCF4-272ENST00000630712 CDCA7LQ96GN5 454 aa8.31□□□□□ -1.08
TCF4-272ENST00000630712 FAM198AQ9UFP1 575 aa8.31□□□□□ -1.08
TCF4-272ENST00000630712 SPDYE16A6NNV3 312 aaPredicted RBP8.3□□□□□ -1.08
TCF4-272ENST00000630712 C3orf80F5H4A9 247 aa8.3□□□□□ -1.08
TCF4-272ENST00000630712 GFRA3O60609 400 aa8.3□□□□□ -1.08
TCF4-272ENST00000630712 E2F4Q16254 413 aa8.29□□□□□ -1.08
TCF4-272ENST00000630712 PRSS12P56730 875 aa8.28□□□□□ -1.08
TCF4-272ENST00000630712 TRAF7Q6Q0C0 670 aa8.28□□□□□ -1.08
TCF4-272ENST00000630712 TATDN2Q93075 761 aa8.27□□□□□ -1.09
TCF4-272ENST00000630712 DAXXQ9UER7 740 aaPredicted RBP8.27□□□□□ -1.09
TCF4-272ENST00000630712 PNMA3Q9UL41 463 aa8.27□□□□□ -1.09
TCF4-272ENST00000630712 CFAP44Q96MT7 982 aa8.26□□□□□ -1.09
TCF4-272ENST00000630712 WDR70Q9NW82 654 aa8.26□□□□□ -1.09
TCF4-272ENST00000630712 RNF40O75150 1001 aa8.25□□□□□ -1.09
TCF4-272ENST00000630712 HRCP23327 699 aa8.25□□□□□ -1.09
TCF4-272ENST00000630712 TJAP1Q5JTD0 557 aa8.25□□□□□ -1.09
TCF4-272ENST00000630712 CDHR5Q9HBB8 845 aa8.25□□□□□ -1.09
TCF4-272ENST00000630712 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.25□□□□□ -1.09
TCF4-272ENST00000630712 LAPTM4AQ15012 233 aa8.24□□□□□ -1.09
TCF4-272ENST00000630712 NUDT18Q6ZVK8 323 aa8.24□□□□□ -1.09
TCF4-272ENST00000630712 NBPF26B4DH59 902 aa8.23□□□□□ -1.09
TCF4-272ENST00000630712 PAXIP1Q6ZW49 1069 aaPredicted RBP8.23□□□□□ -1.09
TCF4-272ENST00000630712 CERKQ8TCT0 537 aa8.23□□□□□ -1.09
TCF4-272ENST00000630712 MTRQ99707 1265 aa8.23□□□□□ -1.09
TCF4-272ENST00000630712 PRKD2Q9BZL6 878 aa8.23□□□□□ -1.09
TCF4-272ENST00000630712 OSBPP22059 807 aa8.22□□□□□ -1.09
TCF4-272ENST00000630712 ZNF516Q92618 1163 aa8.22□□□□□ -1.09
TCF4-272ENST00000630712 BCL11AQ9H165 835 aa8.22□□□□□ -1.09
TCF4-272ENST00000630712 HDGFP51858 240 aaKnown RBP8.2□□□□□ -1.1
TCF4-272ENST00000630712 PPP1R18Q6NYC8 613 aa8.2□□□□□ -1.1
TCF4-272ENST00000630712 IL21Q9HBE4 155 aa8.2□□□□□ -1.1
TCF4-272ENST00000630712 APLP1P51693 650 aa8.19□□□□□ -1.1
TCF4-272ENST00000630712 ARIH1Q9Y4X5 557 aaPredicted RBP8.19□□□□□ -1.1
TCF4-272ENST00000630712 NRG2O14511 850 aaPredicted RBP8.17□□□□□ -1.1
TCF4-272ENST00000630712 PADI6Q6TGC4 694 aa8.17□□□□□ -1.1
TCF4-272ENST00000630712 NKX2-3Q8TAU0 364 aa8.17□□□□□ -1.1
TCF4-272ENST00000630712 SWT1Q5T5J6 900 aaKnown RBP8.16□□□□□ -1.1
TCF4-272ENST00000630712 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.16□□□□□ -1.1
TCF4-272ENST00000630712 COPS2P61201 443 aa8.15□□□□□ -1.1
TCF4-272ENST00000630712 NPDC1Q9NQX5 325 aaPredicted RBP8.15□□□□□ -1.1
TCF4-272ENST00000630712 ZNF787Q6DD87 383 aa8.14□□□□□ -1.11
TCF4-272ENST00000630712 RBM27Q9P2N5 1060 aaKnown RBP8.13□□□□□ -1.11
TCF4-272ENST00000630712 TTC13Q8NBP0 860 aa8.12□□□□□ -1.11
TCF4-272ENST00000630712 V9GY48 417 aaPredicted RBP8.12□□□□□ -1.11
TCF4-272ENST00000630712 SLF2Q8IX21 1173 aa8.11□□□□□ -1.11
TCF4-272ENST00000630712 FAM9AQ8IZU1 332 aaPredicted RBP8.11□□□□□ -1.11
TCF4-272ENST00000630712 ZNF775Q96BV0 537 aaPredicted RBP8.11□□□□□ -1.11
TCF4-272ENST00000630712 PDZRN3Q9UPQ7 1066 aa8.11□□□□□ -1.11
TCF4-272ENST00000630712 ABCC9O60706 1549 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms