RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 FAM69CQ0P6D2 419 aa17.73■□□□□ 0.43
UBE3A-220ENST00000630424 TEFQ10587 303 aa17.73■□□□□ 0.43
UBE3A-220ENST00000630424 MINK1Q8N4C8 1332 aaPredicted RBP17.73■□□□□ 0.43
UBE3A-220ENST00000630424 NLRP13Q86W25 1043 aa17.72■□□□□ 0.43
UBE3A-220ENST00000630424 MEX3CQ5U5Q3 659 aaKnown RBP17.72■□□□□ 0.43
UBE3A-220ENST00000630424 SYTL4Q96C24 671 aaPredicted RBP17.71■□□□□ 0.43
UBE3A-220ENST00000630424 RRP7AQ9Y3A4 280 aaKnown RBP17.71■□□□□ 0.43
UBE3A-220ENST00000630424 HSP90B1P14625 803 aaKnown RBP17.71■□□□□ 0.43
UBE3A-220ENST00000630424 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.71■□□□□ 0.43
UBE3A-220ENST00000630424 RASSF8Q8NHQ8 419 aa17.7■□□□□ 0.42
UBE3A-220ENST00000630424 RAPGEF2Q9Y4G8 1499 aa17.7■□□□□ 0.42
UBE3A-220ENST00000630424 NGEFQ8N5V2 710 aa17.7■□□□□ 0.42
UBE3A-220ENST00000630424 NAP1L5Q96NT1 182 aaPredicted RBP17.69■□□□□ 0.42
UBE3A-220ENST00000630424 CHAF1AQ13111 956 aaPredicted RBP17.69■□□□□ 0.42
UBE3A-220ENST00000630424 ST20-MTHFSA0A0A6YYL1 179 aa17.69■□□□□ 0.42
UBE3A-220ENST00000630424 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
UBE3A-220ENST00000630424 PSME1Q06323 249 aa17.68■□□□□ 0.42
UBE3A-220ENST00000630424 CCDC144AA2RUR9 1427 aa17.67■□□□□ 0.42
UBE3A-220ENST00000630424 CENPJQ9HC77 1338 aaPredicted RBP17.67■□□□□ 0.42
UBE3A-220ENST00000630424 TTC5Q8N0Z6 440 aa17.67■□□□□ 0.42
UBE3A-220ENST00000630424 PMFBP1Q8TBY8 1022 aa17.67■□□□□ 0.42
UBE3A-220ENST00000630424 VPS53Q5VIR6 699 aa17.66■□□□□ 0.42
UBE3A-220ENST00000630424 MFAP1P55081 439 aaKnown RBP17.66■□□□□ 0.42
UBE3A-220ENST00000630424 NOL8Q76FK4 1167 aaKnown RBP17.66■□□□□ 0.42
UBE3A-220ENST00000630424 EVC2Q86UK5 1308 aa17.66■□□□□ 0.42
UBE3A-220ENST00000630424 CCDC34Q96HJ3 373 aa17.65■□□□□ 0.42
UBE3A-220ENST00000630424 KIAA2012Q0VF49 1180 aa17.65■□□□□ 0.42
UBE3A-220ENST00000630424 SLKQ9H2G2 1235 aaPredicted RBP17.65■□□□□ 0.42
UBE3A-220ENST00000630424 MARCH6O60337 910 aa17.65■□□□□ 0.42
UBE3A-220ENST00000630424 L1TD1Q5T7N2 865 aaKnown RBP17.65■□□□□ 0.42
UBE3A-220ENST00000630424 PANK3Q9H999 370 aa17.64■□□□□ 0.41
UBE3A-220ENST00000630424 EIF2S2P20042 333 aaKnown RBP17.63■□□□□ 0.41
UBE3A-220ENST00000630424 KLHL34Q8N239 644 aa17.63■□□□□ 0.41
UBE3A-220ENST00000630424 PHF23Q9BUL5 403 aaPredicted RBP17.62■□□□□ 0.41
UBE3A-220ENST00000630424 GBP4Q96PP9 640 aa17.62■□□□□ 0.41
UBE3A-220ENST00000630424 RTN4Q9NQC3 1192 aaKnown RBP17.62■□□□□ 0.41
UBE3A-220ENST00000630424 CGNL1Q0VF96 1302 aa17.62■□□□□ 0.41
UBE3A-220ENST00000630424 NEXNQ0ZGT2 675 aa17.61■□□□□ 0.41
UBE3A-220ENST00000630424 BCL2L13Q9BXK5 485 aa17.61■□□□□ 0.41
UBE3A-220ENST00000630424 ATF3P18847 181 aa17.6■□□□□ 0.41
UBE3A-220ENST00000630424 UACAQ9BZF9 1416 aa17.6■□□□□ 0.41
UBE3A-220ENST00000630424 MSNP26038 577 aaKnown RBP17.59■□□□□ 0.41
UBE3A-220ENST00000630424 CREBRFQ8IUR6 639 aa17.58■□□□□ 0.41
UBE3A-220ENST00000630424 PDE4CQ08493 712 aa17.58■□□□□ 0.4
UBE3A-220ENST00000630424 RAD21O60216 631 aa17.58■□□□□ 0.4
UBE3A-220ENST00000630424 PRM3Q9NNZ6 103 aa17.58■□□□□ 0.4
UBE3A-220ENST00000630424 GZF1Q9H116 711 aaPredicted RBP17.57■□□□□ 0.4
UBE3A-220ENST00000630424 C9orf78Q9NZ63 289 aaPredicted RBP17.56■□□□□ 0.4
UBE3A-220ENST00000630424 NECTIN2Q92692 538 aa17.56■□□□□ 0.4
UBE3A-220ENST00000630424 RILPL2Q969X0 211 aa17.55■□□□□ 0.4
UBE3A-220ENST00000630424 FANCD2Q9BXW9 1451 aa17.55■□□□□ 0.4
UBE3A-220ENST00000630424 PDE3BQ13370 1112 aa17.54■□□□□ 0.4
UBE3A-220ENST00000630424 RAPGEF4Q8WZA2 1011 aa17.54■□□□□ 0.4
UBE3A-220ENST00000630424 NOL10Q9BSC4 688 aaKnown RBP17.54■□□□□ 0.4
UBE3A-220ENST00000630424 KIF3AQ9Y496 699 aa17.54■□□□□ 0.4
UBE3A-220ENST00000630424 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.54■□□□□ 0.4
UBE3A-220ENST00000630424 FOXD4L1Q9NU39 408 aa17.54■□□□□ 0.4
UBE3A-220ENST00000630424 TCERG1O14776 1098 aaKnown RBP17.53■□□□□ 0.4
UBE3A-220ENST00000630424 SF3A1Q15459 793 aaKnown RBP17.53■□□□□ 0.4
UBE3A-220ENST00000630424 SYAP1Q96A49 352 aaPredicted RBP17.53■□□□□ 0.4
UBE3A-220ENST00000630424 TRIM34Q9BYJ4 488 aa17.53■□□□□ 0.4
UBE3A-220ENST00000630424 KIF16BQ96L93 1317 aa17.53■□□□□ 0.4
UBE3A-220ENST00000630424 NLRP2Q9NX02 1062 aa17.53■□□□□ 0.4
UBE3A-220ENST00000630424 NOC3LQ8WTT2 800 aaKnown RBP17.52■□□□□ 0.4
UBE3A-220ENST00000630424 TPM4P67936 248 aa17.52■□□□□ 0.4
UBE3A-220ENST00000630424 VPS37DQ86XT2 251 aa17.52■□□□□ 0.4
UBE3A-220ENST00000630424 FBXW7Q969H0 707 aa17.52■□□□□ 0.39
UBE3A-220ENST00000630424 PHLDB1Q86UU1 1377 aa17.52■□□□□ 0.39
UBE3A-220ENST00000630424 DIAPH1O60610 1272 aaKnown RBP17.51■□□□□ 0.39
UBE3A-220ENST00000630424 AKAP17AQ02040 695 aaKnown RBP17.51■□□□□ 0.39
UBE3A-220ENST00000630424 ATAD2BQ9ULI0 1458 aa17.51■□□□□ 0.39
UBE3A-220ENST00000630424 NUTM2GQ5VZR2 741 aa17.5■□□□□ 0.39
UBE3A-220ENST00000630424 CTDP1Q9Y5B0 961 aaPredicted RBP17.5■□□□□ 0.39
UBE3A-220ENST00000630424 KIF15Q9NS87 1388 aa17.5■□□□□ 0.39
UBE3A-220ENST00000630424 MYBBP1AQ9BQG0 1328 aaKnown RBP17.5■□□□□ 0.39
UBE3A-220ENST00000630424 ANKRD45Q5TZF3 282 aa17.49■□□□□ 0.39
UBE3A-220ENST00000630424 AMOTL1Q8IY63 956 aa17.49■□□□□ 0.39
UBE3A-220ENST00000630424 USP35Q9P2H5 1018 aa17.49■□□□□ 0.39
UBE3A-220ENST00000630424 ST18O60284 1047 aa17.48■□□□□ 0.39
UBE3A-220ENST00000630424 DDX58O95786 925 aaKnown RBP17.48■□□□□ 0.39
UBE3A-220ENST00000630424 APAF1O14727 1248 aa17.47■□□□□ 0.39
UBE3A-220ENST00000630424 FOXD4L5Q5VV16 416 aaPredicted RBP17.47■□□□□ 0.39
UBE3A-220ENST00000630424 ZKSCAN2Q63HK3 967 aa17.47■□□□□ 0.39
UBE3A-220ENST00000630424 FOXD4L4Q8WXT5 416 aaPredicted RBP17.47■□□□□ 0.39
UBE3A-220ENST00000630424 APPP05067 770 aa17.47■□□□□ 0.39
UBE3A-220ENST00000630424 LRRFIP1Q32MZ4 808 aaKnown RBP17.47■□□□□ 0.39
UBE3A-220ENST00000630424 SYNE3Q6ZMZ3 975 aa17.47■□□□□ 0.39
UBE3A-220ENST00000630424 CEP89Q96ST8 783 aa17.47■□□□□ 0.39
UBE3A-220ENST00000630424 PTMSP20962 102 aa17.46■□□□□ 0.39
UBE3A-220ENST00000630424 FKBP5Q13451 457 aaPredicted RBP17.46■□□□□ 0.39
UBE3A-220ENST00000630424 DIAPH3Q9NSV4 1193 aa17.46■□□□□ 0.39
UBE3A-220ENST00000630424 PES1O00541 588 aaKnown RBP17.45■□□□□ 0.38
UBE3A-220ENST00000630424 DHX16O60231 1041 aaKnown RBP17.45■□□□□ 0.38
UBE3A-220ENST00000630424 NLRP6P59044 892 aa17.45■□□□□ 0.38
UBE3A-220ENST00000630424 TCEAL9Q9UHQ7 104 aa17.45■□□□□ 0.38
UBE3A-220ENST00000630424 TOP2AP11388 1531 aaKnown RBP17.45■□□□□ 0.38
UBE3A-220ENST00000630424 CSPP1Q1MSJ5 1256 aa17.45■□□□□ 0.38
UBE3A-220ENST00000630424 FAM184AQ8NB25 1140 aa17.45■□□□□ 0.38
UBE3A-220ENST00000630424 H3BQV1 296 aa17.45■□□□□ 0.38
UBE3A-220ENST00000630424 RIPK4P57078 832 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms