RNA–Protein interactions for RNA: ENST00000629385.1

ABCC4-207, Transcript of ATP binding cassette subfamily C member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCC4, Length 2,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-207ENST00000629385 TMC1Q8TDI8 760 aa17.68■□□□□ 0.42
ABCC4-207ENST00000629385 KDM5CP41229 1560 aa17.67■□□□□ 0.42
ABCC4-207ENST00000629385 PLEKHH2Q8IVE3 1493 aa17.67■□□□□ 0.42
ABCC4-207ENST00000629385 ZBED9Q6R2W3 1325 aa17.67■□□□□ 0.42
ABCC4-207ENST00000629385 RALGAPBQ86X10 1494 aa17.66■□□□□ 0.42
ABCC4-207ENST00000629385 MYT1LQ9UL68 1186 aa17.66■□□□□ 0.42
ABCC4-207ENST00000629385 UHRF1BP1Q6BDS2 1440 aa17.66■□□□□ 0.42
ABCC4-207ENST00000629385 POLR1AO95602 1720 aaPredicted RBP17.64■□□□□ 0.41
ABCC4-207ENST00000629385 EFCAB2Q5VUJ9 269 aa17.64■□□□□ 0.41
ABCC4-207ENST00000629385 AFAP1Q8N556 730 aa17.64■□□□□ 0.41
ABCC4-207ENST00000629385 ABCC2Q92887 1545 aa17.64■□□□□ 0.41
ABCC4-207ENST00000629385 KDM5DQ9BY66 1539 aa17.64■□□□□ 0.41
ABCC4-207ENST00000629385 B4GALNT3Q6L9W6 998 aa17.62■□□□□ 0.41
ABCC4-207ENST00000629385 SALL2Q9Y467 1007 aaPredicted RBP17.61■□□□□ 0.41
ABCC4-207ENST00000629385 ARHGEF12Q9NZN5 1544 aa17.61■□□□□ 0.41
ABCC4-207ENST00000629385 ARID4BQ4LE39 1312 aaPredicted RBP17.6■□□□□ 0.41
ABCC4-207ENST00000629385 SHROOM2Q13796 1616 aa17.59■□□□□ 0.41
ABCC4-207ENST00000629385 PLA2R1Q13018 1463 aa17.59■□□□□ 0.41
ABCC4-207ENST00000629385 MYO5CQ9NQX4 1742 aa17.58■□□□□ 0.4
ABCC4-207ENST00000629385 PNISRQ8TF01 805 aaKnown RBP17.57■□□□□ 0.4
ABCC4-207ENST00000629385 TRAPPC8Q9Y2L5 1435 aa17.57■□□□□ 0.4
ABCC4-207ENST00000629385 PRAG1Q86YV5 1406 aa17.57■□□□□ 0.4
ABCC4-207ENST00000629385 SPAG9O60271 1321 aaKnown RBP17.56■□□□□ 0.4
ABCC4-207ENST00000629385 PLCH2O75038 1416 aa17.55■□□□□ 0.4
ABCC4-207ENST00000629385 CC2D1BQ5T0F9 858 aaKnown RBP17.55■□□□□ 0.4
ABCC4-207ENST00000629385 PPP4R2Q9NY27 417 aa17.54■□□□□ 0.4
ABCC4-207ENST00000629385 A2MP01023 1474 aa17.54■□□□□ 0.4
ABCC4-207ENST00000629385 ZCCHC11Q5TAX3 1644 aaKnown RBP17.53■□□□□ 0.4
ABCC4-207ENST00000629385 MYBBP1AQ9BQG0 1328 aaKnown RBP17.51■□□□□ 0.39
ABCC4-207ENST00000629385 DUOX2Q9NRD8 1548 aa17.5■□□□□ 0.39
ABCC4-207ENST00000629385 NUDCQ9Y266 331 aa17.5■□□□□ 0.39
ABCC4-207ENST00000629385 RALBP1Q15311 655 aa17.49■□□□□ 0.39
ABCC4-207ENST00000629385 DISP3Q9P2K9 1392 aa17.49■□□□□ 0.39
ABCC4-207ENST00000629385 UNC13BO14795 1591 aa17.49■□□□□ 0.39
ABCC4-207ENST00000629385 MAST1Q9Y2H9 1570 aa17.49■□□□□ 0.39
ABCC4-207ENST00000629385 PANK3Q9H999 370 aa17.48■□□□□ 0.39
ABCC4-207ENST00000629385 KIF3BO15066 747 aa17.48■□□□□ 0.39
ABCC4-207ENST00000629385 TESK2Q96S53 571 aa17.48■□□□□ 0.39
ABCC4-207ENST00000629385 NBR1Q14596 966 aa17.47■□□□□ 0.39
ABCC4-207ENST00000629385 TRPM1Q7Z4N2 1603 aa17.47■□□□□ 0.39
ABCC4-207ENST00000629385 KTN1Q86UP2 1357 aaKnown RBP17.47■□□□□ 0.39
ABCC4-207ENST00000629385 PLXNC1O60486 1568 aa17.46■□□□□ 0.39
ABCC4-207ENST00000629385 ERBINQ96RT1 1412 aa17.46■□□□□ 0.39
ABCC4-207ENST00000629385 TMF1P82094 1093 aa17.45■□□□□ 0.38
ABCC4-207ENST00000629385 IQGAP3Q86VI3 1631 aa17.45■□□□□ 0.38
ABCC4-207ENST00000629385 CLASP1Q7Z460 1538 aa17.45■□□□□ 0.38
ABCC4-207ENST00000629385 PER1O15534 1290 aaPredicted RBP17.44■□□□□ 0.38
ABCC4-207ENST00000629385 ERICH6BQ5W0A0 696 aa17.44■□□□□ 0.38
ABCC4-207ENST00000629385 NLRP13Q86W25 1043 aa17.44■□□□□ 0.38
ABCC4-207ENST00000629385 ABCC1P33527 1531 aa17.44■□□□□ 0.38
ABCC4-207ENST00000629385 SMG6Q86US8 1419 aaKnown RBP17.44■□□□□ 0.38
ABCC4-207ENST00000629385 BRD4O60885 1362 aaPredicted RBP17.43■□□□□ 0.38
ABCC4-207ENST00000629385 SCAPERQ9BY12 1400 aa17.43■□□□□ 0.38
ABCC4-207ENST00000629385 GPRASP1Q5JY77 1395 aa17.42■□□□□ 0.38
ABCC4-207ENST00000629385 UHRF1BP1LA0JNW5 1464 aa17.41■□□□□ 0.38
ABCC4-207ENST00000629385 FANCIQ9NVI1 1328 aa17.41■□□□□ 0.38
ABCC4-207ENST00000629385 FANCAO15360 1455 aa17.39■□□□□ 0.37
ABCC4-207ENST00000629385 CCDC136Q96JN2 1154 aa17.39■□□□□ 0.37
ABCC4-207ENST00000629385 LRPPRCP42704 1394 aaKnown RBP17.38■□□□□ 0.37
ABCC4-207ENST00000629385 PARD3Q8TEW0 1356 aa17.38■□□□□ 0.37
ABCC4-207ENST00000629385 COL17A1Q9UMD9 1497 aaPredicted RBP17.37■□□□□ 0.37
ABCC4-207ENST00000629385 CHGAP10645 457 aaKnown RBP17.37■□□□□ 0.37
ABCC4-207ENST00000629385 MAGI2Q86UL8 1455 aa17.37■□□□□ 0.37
ABCC4-207ENST00000629385 WDR7Q9Y4E6 1490 aa17.37■□□□□ 0.37
ABCC4-207ENST00000629385 CDCA7LQ96GN5 454 aa17.36■□□□□ 0.37
ABCC4-207ENST00000629385 PRDM15P57071 1507 aaPredicted RBP17.36■□□□□ 0.37
ABCC4-207ENST00000629385 KANK1Q14678 1352 aa17.35■□□□□ 0.37
ABCC4-207ENST00000629385 ATP10AO60312 1499 aa17.35■□□□□ 0.37
ABCC4-207ENST00000629385 E9PCH4 1651 aa17.35■□□□□ 0.37
ABCC4-207ENST00000629385 KNSTRNQ9Y448 316 aa17.34■□□□□ 0.37
ABCC4-207ENST00000629385 ZFYVE16Q7Z3T8 1539 aa17.34■□□□□ 0.37
ABCC4-207ENST00000629385 ADGRL1O94910 1474 aa17.34■□□□□ 0.37
ABCC4-207ENST00000629385 PAK3O75914 559 aaPredicted RBP17.33■□□□□ 0.37
ABCC4-207ENST00000629385 NPM1P06748 294 aaKnown RBP eCLIP17.33■□□□□ 0.37
ABCC4-207ENST00000629385 CFAP70Q5T0N1 1121 aa17.33■□□□□ 0.36
ABCC4-207ENST00000629385 RTEL1-TNFRSF6BF6WH68 1400 aa17.32■□□□□ 0.36
ABCC4-207ENST00000629385 GGT6Q6P531 493 aa17.31■□□□□ 0.36
ABCC4-207ENST00000629385 ASXL2Q76L83 1435 aa17.31■□□□□ 0.36
ABCC4-207ENST00000629385 EIF2AK4Q9P2K8 1649 aaKnown RBP17.31■□□□□ 0.36
ABCC4-207ENST00000629385 DEKP35659 375 aaKnown RBP17.31■□□□□ 0.36
ABCC4-207ENST00000629385 RCAN3Q9UKA8 241 aa17.31■□□□□ 0.36
ABCC4-207ENST00000629385 ATP7AQ04656 1500 aa17.3■□□□□ 0.36
ABCC4-207ENST00000629385 SENP3Q9H4L4 574 aaPredicted RBP17.3■□□□□ 0.36
ABCC4-207ENST00000629385 RNF123Q5XPI4 1314 aa17.29■□□□□ 0.36
ABCC4-207ENST00000629385 UGGT1Q9NYU2 1555 aa17.29■□□□□ 0.36
ABCC4-207ENST00000629385 ADAMTS8Q9UP79 889 aa17.28■□□□□ 0.36
ABCC4-207ENST00000629385 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
ABCC4-207ENST00000629385 EXOC6Q8TAG9 804 aa17.27■□□□□ 0.36
ABCC4-207ENST00000629385 WASHC2CQ9Y4E1 1318 aa17.27■□□□□ 0.36
ABCC4-207ENST00000629385 CLTCL1P53675 1640 aa17.27■□□□□ 0.36
ABCC4-207ENST00000629385 PLIN1O60240 522 aa17.27■□□□□ 0.36
ABCC4-207ENST00000629385 RRP1P56182 461 aaKnown RBP17.27■□□□□ 0.36
ABCC4-207ENST00000629385 NPM2Q86SE8 214 aaKnown RBP17.27■□□□□ 0.36
ABCC4-207ENST00000629385 CFAP65Q6ZU64 1925 aaKnown RBP17.26■□□□□ 0.35
ABCC4-207ENST00000629385 TRPM2O94759 1503 aa17.26■□□□□ 0.35
ABCC4-207ENST00000629385 NOP58Q9Y2X3 529 aaKnown RBP17.25■□□□□ 0.35
ABCC4-207ENST00000629385 SPHKAPQ2M3C7 1700 aa17.25■□□□□ 0.35
ABCC4-207ENST00000629385 PTPRTO14522 1441 aa17.25■□□□□ 0.35
ABCC4-207ENST00000629385 MADDQ8WXG6 1647 aa17.24■□□□□ 0.35
ABCC4-207ENST00000629385 PPP2R1AP30153 589 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms