RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 PLIN1O60240 522 aa24.99■■□□□ 1.59
MECP2-218ENST00000629277 CHMP7Q8WUX9 453 aaPredicted RBP24.99■■□□□ 1.59
MECP2-218ENST00000629277 NBPF1Q3BBV0 1214 aa24.98■■□□□ 1.59
MECP2-218ENST00000629277 RGL3Q3MIN7 710 aa24.98■■□□□ 1.59
MECP2-218ENST00000629277 RTL5Q5HYW3 569 aaPredicted RBP24.98■■□□□ 1.59
MECP2-218ENST00000629277 TSPY4P0CV99 314 aa24.97■■□□□ 1.59
MECP2-218ENST00000629277 TSPY10P0CW01 314 aa24.97■■□□□ 1.59
MECP2-218ENST00000629277 PDE4AP27815 886 aa24.96■■□□□ 1.59
MECP2-218ENST00000629277 NLRP13Q86W25 1043 aa24.96■■□□□ 1.59
MECP2-218ENST00000629277 PLEKHD1A6NEE1 506 aa24.96■■□□□ 1.59
MECP2-218ENST00000629277 ARHGEF12Q9NZN5 1544 aa24.95■■□□□ 1.59
MECP2-218ENST00000629277 CC2D1BQ5T0F9 858 aaKnown RBP24.95■■□□□ 1.58
MECP2-218ENST00000629277 LAS1LQ9Y4W2 734 aaKnown RBP24.94■■□□□ 1.58
MECP2-218ENST00000629277 KTN1Q86UP2 1357 aaKnown RBP24.93■■□□□ 1.58
MECP2-218ENST00000629277 JPH4Q96JJ6 628 aa24.92■■□□□ 1.58
MECP2-218ENST00000629277 ADCY10Q96PN6 1610 aa24.92■■□□□ 1.58
MECP2-218ENST00000629277 PARD3Q8TEW0 1356 aa24.92■■□□□ 1.58
MECP2-218ENST00000629277 TCERG1O14776 1098 aaKnown RBP24.92■■□□□ 1.58
MECP2-218ENST00000629277 PER1O15534 1290 aaPredicted RBP24.92■■□□□ 1.58
MECP2-218ENST00000629277 CEP170Q5SW79 1584 aa24.9■■□□□ 1.58
MECP2-218ENST00000629277 EIF4G3O43432 1585 aaKnown RBP24.9■■□□□ 1.58
MECP2-218ENST00000629277 CDC42BPAQ5VT25 1732 aa24.9■■□□□ 1.58
MECP2-218ENST00000629277 BACH2Q9BYV9 841 aa24.89■■□□□ 1.58
MECP2-218ENST00000629277 E9PCH4 1651 aa24.88■■□□□ 1.57
MECP2-218ENST00000629277 ABCC10Q5T3U5 1492 aa24.87■■□□□ 1.57
MECP2-218ENST00000629277 MAGI1Q96QZ7 1491 aaPredicted RBP24.85■■□□□ 1.57
MECP2-218ENST00000629277 SHANK2Q9UPX8 1470 aa24.85■■□□□ 1.57
MECP2-218ENST00000629277 PDE3BQ13370 1112 aa24.85■■□□□ 1.57
MECP2-218ENST00000629277 PTPRGP23470 1445 aa24.84■■□□□ 1.57
MECP2-218ENST00000629277 ATP10BO94823 1461 aa24.84■■□□□ 1.57
MECP2-218ENST00000629277 CRBNQ96SW2 442 aa24.84■■□□□ 1.57
MECP2-218ENST00000629277 PRAG1Q86YV5 1406 aa24.84■■□□□ 1.57
MECP2-218ENST00000629277 DISP3Q9P2K9 1392 aa24.84■■□□□ 1.57
MECP2-218ENST00000629277 KDM5DQ9BY66 1539 aa24.84■■□□□ 1.57
MECP2-218ENST00000629277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.83■■□□□ 1.57
MECP2-218ENST00000629277 CARMIL2Q6F5E8 1435 aa24.83■■□□□ 1.56
MECP2-218ENST00000629277 PANK3Q9H999 370 aa24.82■■□□□ 1.56
MECP2-218ENST00000629277 NEFMP07197 916 aa24.81■■□□□ 1.56
MECP2-218ENST00000629277 C20orf194Q5TEA3 1177 aa24.81■■□□□ 1.56
MECP2-218ENST00000629277 CCDC144AA2RUR9 1427 aa24.8■■□□□ 1.56
MECP2-218ENST00000629277 FAM135AQ9P2D6 1515 aa24.8■■□□□ 1.56
MECP2-218ENST00000629277 TESK2Q96S53 571 aa24.8■■□□□ 1.56
MECP2-218ENST00000629277 MS4A1P11836 297 aa24.77■■□□□ 1.56
MECP2-218ENST00000629277 SYNJ2O15056 1496 aa24.76■■□□□ 1.55
MECP2-218ENST00000629277 IL27Q8NEV9 243 aa24.75■■□□□ 1.55
MECP2-218ENST00000629277 TRPM1Q7Z4N2 1603 aa24.75■■□□□ 1.55
MECP2-218ENST00000629277 ABCA8O94911 1581 aa24.74■■□□□ 1.55
MECP2-218ENST00000629277 PLA2R1Q13018 1463 aa24.74■■□□□ 1.55
MECP2-218ENST00000629277 ADAMTS8Q9UP79 889 aa24.73■■□□□ 1.55
MECP2-218ENST00000629277 A2MP01023 1474 aa24.73■■□□□ 1.55
MECP2-218ENST00000629277 COL17A1Q9UMD9 1497 aaPredicted RBP24.72■■□□□ 1.55
MECP2-218ENST00000629277 BLMP54132 1417 aaPredicted RBP24.72■■□□□ 1.55
MECP2-218ENST00000629277 SLC4A3P48751 1232 aa24.69■■□□□ 1.54
MECP2-218ENST00000629277 GPRASP1Q5JY77 1395 aa24.69■■□□□ 1.54
MECP2-218ENST00000629277 RTN4Q9NQC3 1192 aaKnown RBP24.68■■□□□ 1.54
MECP2-218ENST00000629277 NUP160Q12769 1436 aa24.68■■□□□ 1.54
MECP2-218ENST00000629277 ERBINQ96RT1 1412 aa24.68■■□□□ 1.54
MECP2-218ENST00000629277 CCDC141Q6ZP82 1450 aa24.68■■□□□ 1.54
MECP2-218ENST00000629277 SAMD9LQ8IVG5 1584 aa24.66■■□□□ 1.54
MECP2-218ENST00000629277 TMF1P82094 1093 aa24.65■■□□□ 1.54
MECP2-218ENST00000629277 WASHC2CQ9Y4E1 1318 aa24.65■■□□□ 1.54
MECP2-218ENST00000629277 ARHGEF5Q12774 1597 aa24.65■■□□□ 1.54
MECP2-218ENST00000629277 PLEKHH1Q9ULM0 1364 aa24.63■■□□□ 1.53
MECP2-218ENST00000629277 PRDM15P57071 1507 aaPredicted RBP24.62■■□□□ 1.53
MECP2-218ENST00000629277 KDM2BQ8NHM5 1336 aa24.6■■□□□ 1.53
MECP2-218ENST00000629277 USP35Q9P2H5 1018 aa24.6■■□□□ 1.53
MECP2-218ENST00000629277 ZMYM4Q5VZL5 1548 aa24.6■■□□□ 1.53
MECP2-218ENST00000629277 DUSP27Q5VZP5 1158 aa24.59■■□□□ 1.53
MECP2-218ENST00000629277 SYCP2Q9BX26 1530 aa24.59■■□□□ 1.53
MECP2-218ENST00000629277 PLEKHH2Q8IVE3 1493 aa24.59■■□□□ 1.53
MECP2-218ENST00000629277 ERCC6Q03468 1493 aa24.58■■□□□ 1.53
MECP2-218ENST00000629277 PPM1GO15355 546 aaPredicted RBP24.58■■□□□ 1.53
MECP2-218ENST00000629277 PPP2R1AP30153 589 aa24.58■■□□□ 1.53
MECP2-218ENST00000629277 MAGI2Q86UL8 1455 aa24.57■■□□□ 1.52
MECP2-218ENST00000629277 ANO8Q9HCE9 1232 aaPredicted RBP24.57■■□□□ 1.52
MECP2-218ENST00000629277 CDC42BPBQ9Y5S2 1711 aa24.57■■□□□ 1.52
MECP2-218ENST00000629277 WDR43Q15061 677 aaKnown RBP eCLIP24.55■■□□□ 1.52
MECP2-218ENST00000629277 INSRP06213 1382 aa24.55■■□□□ 1.52
MECP2-218ENST00000629277 KNSTRNQ9Y448 316 aa24.54■■□□□ 1.52
MECP2-218ENST00000629277 RSPH4AQ5TD94 716 aa24.54■■□□□ 1.52
MECP2-218ENST00000629277 DDRGK1Q96HY6 314 aa24.54■■□□□ 1.52
MECP2-218ENST00000629277 CCDC146Q8IYE0 955 aa24.53■■□□□ 1.52
MECP2-218ENST00000629277 RGS3P49796 1198 aa24.51■■□□□ 1.51
MECP2-218ENST00000629277 WDR7Q9Y4E6 1490 aa24.51■■□□□ 1.51
MECP2-218ENST00000629277 C8orf34Q49A92 452 aa24.51■■□□□ 1.51
MECP2-218ENST00000629277 AMER1Q5JTC6 1135 aaPredicted RBP24.51■■□□□ 1.51
MECP2-218ENST00000629277 CENPQQ7L2Z9 268 aaPredicted RBP24.51■■□□□ 1.51
MECP2-218ENST00000629277 NFKBIBQ15653 356 aa24.5■■□□□ 1.51
MECP2-218ENST00000629277 PREX2Q70Z35 1606 aa24.5■■□□□ 1.51
MECP2-218ENST00000629277 GOLGA2Q08379 1002 aa24.5■■□□□ 1.51
MECP2-218ENST00000629277 SPINK5Q9NQ38 1064 aaPredicted RBP24.5■■□□□ 1.51
MECP2-218ENST00000629277 ARHGAP5Q13017 1502 aa24.5■■□□□ 1.51
MECP2-218ENST00000629277 ZNF521Q96K83 1311 aa24.49■■□□□ 1.51
MECP2-218ENST00000629277 MYO5CQ9NQX4 1742 aa24.49■■□□□ 1.51
MECP2-218ENST00000629277 UNC13BO14795 1591 aa24.49■■□□□ 1.51
MECP2-218ENST00000629277 LAMC1P11047 1609 aa24.48■■□□□ 1.51
MECP2-218ENST00000629277 FAM161AQ3B820 660 aa24.46■■□□□ 1.51
MECP2-218ENST00000629277 TTC37Q6PGP7 1564 aa24.45■■□□□ 1.51
MECP2-218ENST00000629277 BRPF3Q9ULD4 1205 aa24.45■■□□□ 1.5
MECP2-218ENST00000629277 EIF2AK4Q9P2K8 1649 aaKnown RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms