RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 CCDC144AA2RUR9 1427 aa31.02■■■□□ 2.56
PNKP-220ENST00000627232 PLA2R1Q13018 1463 aa31.01■■■□□ 2.55
PNKP-220ENST00000627232 ZNF518AQ6AHZ1 1483 aa31■■■□□ 2.55
PNKP-220ENST00000627232 RALGAPBQ86X10 1494 aa30.99■■■□□ 2.55
PNKP-220ENST00000627232 KIDINS220Q9ULH0 1771 aa30.98■■■□□ 2.55
PNKP-220ENST00000627232 WASHC2AQ641Q2 1341 aa30.95■■■□□ 2.55
PNKP-220ENST00000627232 KDM5CP41229 1560 aa30.94■■■□□ 2.54
PNKP-220ENST00000627232 VWDEQ8N2E2 1590 aa30.94■■■□□ 2.54
PNKP-220ENST00000627232 DHX29Q7Z478 1369 aaKnown RBP30.94■■■□□ 2.54
PNKP-220ENST00000627232 E9PCH4 1651 aa30.94■■■□□ 2.54
PNKP-220ENST00000627232 TET3O43151 1660 aa30.94■■■□□ 2.54
PNKP-220ENST00000627232 ANP32CO43423 234 aa30.92■■■□□ 2.54
PNKP-220ENST00000627232 RIMBP3CA6NJZ7 1639 aa30.91■■■□□ 2.54
PNKP-220ENST00000627232 RIMBP3BA6NNM3 1639 aa30.91■■■□□ 2.54
PNKP-220ENST00000627232 RIMBP3Q9UFD9 1639 aa30.91■■■□□ 2.54
PNKP-220ENST00000627232 NEO1Q92859 1461 aa30.91■■■□□ 2.54
PNKP-220ENST00000627232 POGZQ7Z3K3 1410 aa30.9■■■□□ 2.54
PNKP-220ENST00000627232 SCAF1Q9H7N4 1312 aaKnown RBP30.9■■■□□ 2.54
PNKP-220ENST00000627232 CCDC7Q96M83 1385 aa30.89■■■□□ 2.54
PNKP-220ENST00000627232 CCER2I3L3R5 266 aa30.89■■■□□ 2.54
PNKP-220ENST00000627232 PRDM15P57071 1507 aaPredicted RBP30.89■■■□□ 2.54
PNKP-220ENST00000627232 KANK1Q14678 1352 aa30.88■■■□□ 2.53
PNKP-220ENST00000627232 MLH3Q9UHC1 1453 aa30.86■■■□□ 2.53
PNKP-220ENST00000627232 SPHKAPQ2M3C7 1700 aa30.85■■■□□ 2.53
PNKP-220ENST00000627232 MROH1Q8NDA8 1641 aa30.85■■■□□ 2.53
PNKP-220ENST00000627232 MAP3K4Q9Y6R4 1608 aa30.85■■■□□ 2.53
PNKP-220ENST00000627232 GLI2P10070 1586 aa30.85■■■□□ 2.53
PNKP-220ENST00000627232 USP47Q96K76 1375 aa30.85■■■□□ 2.53
PNKP-220ENST00000627232 ZNF326Q5BKZ1 582 aaKnown RBP30.84■■■□□ 2.53
PNKP-220ENST00000627232 DCAF11Q8TEB1 546 aa30.84■■■□□ 2.53
PNKP-220ENST00000627232 HECW2Q9P2P5 1572 aa30.84■■■□□ 2.53
PNKP-220ENST00000627232 CNTLNQ9NXG0 1405 aa30.84■■■□□ 2.53
PNKP-220ENST00000627232 TRPM2O94759 1503 aa30.83■■■□□ 2.53
PNKP-220ENST00000627232 MYT1LQ9UL68 1186 aa30.83■■■□□ 2.53
PNKP-220ENST00000627232 TRPM1Q7Z4N2 1603 aa30.83■■■□□ 2.53
PNKP-220ENST00000627232 A2MP01023 1474 aa30.82■■■□□ 2.52
PNKP-220ENST00000627232 PTPRTO14522 1441 aa30.81■■■□□ 2.52
PNKP-220ENST00000627232 RNF17Q9BXT8 1623 aaKnown RBP30.81■■■□□ 2.52
PNKP-220ENST00000627232 PRAG1Q86YV5 1406 aa30.81■■■□□ 2.52
PNKP-220ENST00000627232 CEP152O94986 1710 aa30.79■■■□□ 2.52
PNKP-220ENST00000627232 BCORL1Q5H9F3 1711 aa30.79■■■□□ 2.52
PNKP-220ENST00000627232 C11orf95C9JLR9 678 aaPredicted RBP30.78■■■□□ 2.52
PNKP-220ENST00000627232 KIF3BO15066 747 aa30.78■■■□□ 2.52
PNKP-220ENST00000627232 KDM2AQ9Y2K7 1162 aa30.78■■■□□ 2.52
PNKP-220ENST00000627232 LAMC1P11047 1609 aa30.77■■■□□ 2.52
PNKP-220ENST00000627232 ARID4BQ4LE39 1312 aaPredicted RBP30.76■■■□□ 2.51
PNKP-220ENST00000627232 CYB5RLQ6IPT4 315 aa30.75■■■□□ 2.51
PNKP-220ENST00000627232 LMTK2Q8IWU2 1503 aa30.75■■■□□ 2.51
PNKP-220ENST00000627232 KIF7Q2M1P5 1343 aa30.75■■■□□ 2.51
PNKP-220ENST00000627232 CARD11Q9BXL7 1154 aa30.73■■■□□ 2.51
PNKP-220ENST00000627232 NEURL4Q96JN8 1562 aa30.71■■■□□ 2.51
PNKP-220ENST00000627232 FRMPD1Q5SYB0 1578 aa30.71■■■□□ 2.51
PNKP-220ENST00000627232 CLTCL1P53675 1640 aa30.71■■■□□ 2.51
PNKP-220ENST00000627232 ABCA6Q8N139 1617 aa30.71■■■□□ 2.51
PNKP-220ENST00000627232 EFCAB6Q5THR3 1501 aa30.7■■■□□ 2.51
PNKP-220ENST00000627232 RICTORQ6R327 1708 aa30.69■■■□□ 2.5
PNKP-220ENST00000627232 ROCK2O75116 1388 aaKnown RBP30.69■■■□□ 2.5
PNKP-220ENST00000627232 GPRASP1Q5JY77 1395 aa30.69■■■□□ 2.5
PNKP-220ENST00000627232 RGL3Q3MIN7 710 aa30.69■■■□□ 2.5
PNKP-220ENST00000627232 STAC3Q96MF2 364 aa30.66■■■□□ 2.5
PNKP-220ENST00000627232 GTF3C3Q9Y5Q9 886 aa30.65■■■□□ 2.5
PNKP-220ENST00000627232 PPRC1Q5VV67 1664 aaKnown RBP30.64■■■□□ 2.5
PNKP-220ENST00000627232 DIP2BQ9P265 1576 aa30.64■■■□□ 2.5
PNKP-220ENST00000627232 DIP2CQ9Y2E4 1556 aa30.61■■■□□ 2.49
PNKP-220ENST00000627232 MADDQ8WXG6 1647 aa30.6■■■□□ 2.49
PNKP-220ENST00000627232 KIF1BO60333 1816 aa30.57■■■□□ 2.48
PNKP-220ENST00000627232 ST20-MTHFSA0A0A6YYL1 179 aa30.54■■■□□ 2.48
PNKP-220ENST00000627232 RAPGEF3O95398 923 aa30.53■■■□□ 2.48
PNKP-220ENST00000627232 ZMYM4Q5VZL5 1548 aa30.52■■■□□ 2.48
PNKP-220ENST00000627232 NBPF1Q3BBV0 1214 aa30.51■■■□□ 2.47
PNKP-220ENST00000627232 KIAA1210Q9ULL0 1709 aa30.5■■■□□ 2.47
PNKP-220ENST00000627232 PRKRIP1Q9H875 184 aaPredicted RBP30.5■■■□□ 2.47
PNKP-220ENST00000627232 ABCC3O15438 1527 aa30.5■■■□□ 2.47
PNKP-220ENST00000627232 FAM69CQ0P6D2 419 aa30.47■■■□□ 2.47
PNKP-220ENST00000627232 ZC3H13Q5T200 1668 aaKnown RBP30.47■■■□□ 2.47
PNKP-220ENST00000627232 IFT172Q9UG01 1749 aa30.47■■■□□ 2.47
PNKP-220ENST00000627232 CAMSAP1Q5T5Y3 1602 aa30.46■■■□□ 2.47
PNKP-220ENST00000627232 MYOM2P54296 1465 aa30.45■■■□□ 2.47
PNKP-220ENST00000627232 IQGAP1P46940 1657 aa30.45■■■□□ 2.46
PNKP-220ENST00000627232 NPATQ14207 1427 aa30.44■■■□□ 2.46
PNKP-220ENST00000627232 UGGT1Q9NYU2 1555 aa30.44■■■□□ 2.46
PNKP-220ENST00000627232 MROH2AA6NES4 1674 aa30.42■■■□□ 2.46
PNKP-220ENST00000627232 GGT6Q6P531 493 aa30.42■■■□□ 2.46
PNKP-220ENST00000627232 TSPOAP1O95153 1857 aa30.4■■■□□ 2.46
PNKP-220ENST00000627232 ADGRB3O60242 1522 aa30.4■■■□□ 2.46
PNKP-220ENST00000627232 COL17A1Q9UMD9 1497 aaPredicted RBP30.4■■■□□ 2.46
PNKP-220ENST00000627232 YEATS2Q9ULM3 1422 aa30.39■■■□□ 2.46
PNKP-220ENST00000627232 WASHC2CQ9Y4E1 1318 aa30.38■■■□□ 2.45
PNKP-220ENST00000627232 POLR3GLQ9BT43 218 aa30.37■■■□□ 2.45
PNKP-220ENST00000627232 ARHGAP31Q2M1Z3 1444 aa30.36■■■□□ 2.45
PNKP-220ENST00000627232 REREQ9P2R6 1566 aa30.35■■■□□ 2.45
PNKP-220ENST00000627232 NOS1P29475 1434 aa30.34■■■□□ 2.45
PNKP-220ENST00000627232 TESK2Q96S53 571 aa30.34■■■□□ 2.45
PNKP-220ENST00000627232 KIF13AQ9H1H9 1805 aa30.33■■■□□ 2.45
PNKP-220ENST00000627232 SCAF11Q99590 1463 aaKnown RBP30.32■■■□□ 2.44
PNKP-220ENST00000627232 NRXN1Q9ULB1 1477 aa30.32■■■□□ 2.44
PNKP-220ENST00000627232 CFAP65Q6ZU64 1925 aaKnown RBP30.32■■■□□ 2.44
PNKP-220ENST00000627232 SIGLEC1Q9BZZ2 1709 aa30.32■■■□□ 2.44
PNKP-220ENST00000627232 PIK3C2BO00750 1634 aa30.31■■■□□ 2.44
PNKP-220ENST00000627232 PPLO60437 1756 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms