RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 RYDENQ9NUL5 291 aaKnown RBP12.16□□□□□ -0.46
CHD2-209ENST00000627185 NUP160Q12769 1436 aa12.16□□□□□ -0.46
CHD2-209ENST00000627185 SYNJ2O15056 1496 aa12.15□□□□□ -0.46
CHD2-209ENST00000627185 GCC2Q8IWJ2 1684 aa12.15□□□□□ -0.46
CHD2-209ENST00000627185 ZNF608Q9ULD9 1512 aaPredicted RBP12.14□□□□□ -0.47
CHD2-209ENST00000627185 CDK11AQ9UQ88 783 aaPredicted RBP12.13□□□□□ -0.47
CHD2-209ENST00000627185 EIF4G3O43432 1585 aaKnown RBP12.13□□□□□ -0.47
CHD2-209ENST00000627185 ITGAEP38570 1179 aa12.12□□□□□ -0.47
CHD2-209ENST00000627185 NUP153P49790 1475 aaKnown RBP12.12□□□□□ -0.47
CHD2-209ENST00000627185 MS4A3Q96HJ5 214 aa12.11□□□□□ -0.47
CHD2-209ENST00000627185 ATP1B4Q9UN42 357 aaPredicted RBP12.11□□□□□ -0.47
CHD2-209ENST00000627185 GTF3C3Q9Y5Q9 886 aa12.11□□□□□ -0.47
CHD2-209ENST00000627185 KDM2AQ9Y2K7 1162 aa12.1□□□□□ -0.47
CHD2-209ENST00000627185 RAPGEF6Q8TEU7 1601 aa12.1□□□□□ -0.47
CHD2-209ENST00000627185 TROQ12816 1431 aaPredicted RBP12.09□□□□□ -0.47
CHD2-209ENST00000627185 CARMIL2Q6F5E8 1435 aa12.09□□□□□ -0.47
CHD2-209ENST00000627185 ADCY10Q96PN6 1610 aa12.08□□□□□ -0.48
CHD2-209ENST00000627185 KDM5BQ9UGL1 1544 aa12.08□□□□□ -0.48
CHD2-209ENST00000627185 HAX1O00165 279 aa12.08□□□□□ -0.48
CHD2-209ENST00000627185 DNMT1P26358 1616 aaKnown RBP12.08□□□□□ -0.48
CHD2-209ENST00000627185 CCER2I3L3R5 266 aa12.07□□□□□ -0.48
CHD2-209ENST00000627185 ADGRL2O95490 1459 aa12.07□□□□□ -0.48
CHD2-209ENST00000627185 TONSLQ96HA7 1378 aa12.06□□□□□ -0.48
CHD2-209ENST00000627185 CDK13Q14004 1512 aaKnown RBP12.06□□□□□ -0.48
CHD2-209ENST00000627185 DAPK1P53355 1430 aa12.05□□□□□ -0.48
CHD2-209ENST00000627185 SIN3AQ96ST3 1273 aa12.05□□□□□ -0.48
CHD2-209ENST00000627185 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
CHD2-209ENST00000627185 CABP2Q9NPB3 220 aa12.05□□□□□ -0.48
CHD2-209ENST00000627185 DENND4BO75064 1496 aaPredicted RBP12.05□□□□□ -0.48
CHD2-209ENST00000627185 ABCC5O15440 1437 aa12.04□□□□□ -0.48
CHD2-209ENST00000627185 EVX2Q03828 476 aa12.04□□□□□ -0.48
CHD2-209ENST00000627185 EFCAB3Q8N7B9 438 aa12.04□□□□□ -0.48
CHD2-209ENST00000627185 TRPC6Q9Y210 931 aa12.04□□□□□ -0.48
CHD2-209ENST00000627185 CEP170Q5SW79 1584 aa12.04□□□□□ -0.48
CHD2-209ENST00000627185 ERCC6Q03468 1493 aa12.03□□□□□ -0.48
CHD2-209ENST00000627185 SOX12O15370 315 aa12.02□□□□□ -0.49
CHD2-209ENST00000627185 CLCN6P51797 869 aa12.02□□□□□ -0.49
CHD2-209ENST00000627185 TMEM106CQ9BVX2 250 aa12.02□□□□□ -0.49
CHD2-209ENST00000627185 SHANK2Q9UPX8 1470 aa12.02□□□□□ -0.49
CHD2-209ENST00000627185 ABCA8O94911 1581 aa12.01□□□□□ -0.49
CHD2-209ENST00000627185 ITSN2Q9NZM3 1697 aa12.01□□□□□ -0.49
CHD2-209ENST00000627185 TIE1P35590 1138 aa12□□□□□ -0.49
CHD2-209ENST00000627185 ANKRD30BQ9BXX2 1392 aa12□□□□□ -0.49
CHD2-209ENST00000627185 GPATCH8Q9UKJ3 1502 aaKnown RBP12□□□□□ -0.49
CHD2-209ENST00000627185 FBXO22Q8NEZ5 403 aa11.99□□□□□ -0.49
CHD2-209ENST00000627185 CHMP7Q8WUX9 453 aaPredicted RBP11.99□□□□□ -0.49
CHD2-209ENST00000627185 JPH4Q96JJ6 628 aa11.99□□□□□ -0.49
CHD2-209ENST00000627185 RPRD2Q5VT52 1461 aaKnown RBP11.99□□□□□ -0.49
CHD2-209ENST00000627185 NCOA1Q15788 1441 aa11.98□□□□□ -0.49
CHD2-209ENST00000627185 GALR2O43603 387 aaPredicted RBP11.98□□□□□ -0.49
CHD2-209ENST00000627185 NLRP6P59044 892 aa11.98□□□□□ -0.49
CHD2-209ENST00000627185 ABCC10Q5T3U5 1492 aa11.97□□□□□ -0.49
CHD2-209ENST00000627185 MPHOSPH9Q99550 1183 aa11.97□□□□□ -0.49
CHD2-209ENST00000627185 PHF8Q9UPP1 1060 aa11.96□□□□□ -0.49
CHD2-209ENST00000627185 TTLL13PA6NNM8 815 aa11.95□□□□□ -0.5
CHD2-209ENST00000627185 KDM5DQ9BY66 1539 aa11.95□□□□□ -0.5
CHD2-209ENST00000627185 CAMSAP2Q08AD1 1489 aa11.95□□□□□ -0.5
CHD2-209ENST00000627185 RSPH4AQ5TD94 716 aa11.94□□□□□ -0.5
CHD2-209ENST00000627185 BMP2KQ9NSY1 1161 aaPredicted RBP11.94□□□□□ -0.5
CHD2-209ENST00000627185 PLB1Q6P1J6 1458 aa11.94□□□□□ -0.5
CHD2-209ENST00000627185 ARHGEF5Q12774 1597 aa11.93□□□□□ -0.5
CHD2-209ENST00000627185 GOLGA2Q08379 1002 aa11.93□□□□□ -0.5
CHD2-209ENST00000627185 TEX14Q8IWB6 1497 aa11.93□□□□□ -0.5
CHD2-209ENST00000627185 ADGBQ8N7X0 1667 aa11.93□□□□□ -0.5
CHD2-209ENST00000627185 PRG4Q92954 1404 aaPredicted RBP11.93□□□□□ -0.5
CHD2-209ENST00000627185 KDM6BO15054 1643 aa11.93□□□□□ -0.5
CHD2-209ENST00000627185 CROCC2H7BZ55 1655 aa11.92□□□□□ -0.5
CHD2-209ENST00000627185 ATP10BO94823 1461 aa11.92□□□□□ -0.5
CHD2-209ENST00000627185 RRP7BPQ9NSQ0 103 aa11.92□□□□□ -0.5
CHD2-209ENST00000627185 ANKRD30AQ9BXX3 1397 aa11.92□□□□□ -0.5
CHD2-209ENST00000627185 PZPP20742 1482 aa11.91□□□□□ -0.5
CHD2-209ENST00000627185 YTHDC1Q96MU7 727 aaKnown RBP11.91□□□□□ -0.5
CHD2-209ENST00000627185 CFDP1Q9UEE9 299 aaPredicted RBP11.91□□□□□ -0.5
CHD2-209ENST00000627185 SPATA31E1Q6ZUB1 1445 aa11.91□□□□□ -0.5
CHD2-209ENST00000627185 ARID4BQ4LE39 1312 aaPredicted RBP11.9□□□□□ -0.5
CHD2-209ENST00000627185 KIF14Q15058 1648 aa11.9□□□□□ -0.5
CHD2-209ENST00000627185 ANP32CO43423 234 aa11.9□□□□□ -0.5
CHD2-209ENST00000627185 PTPRGP23470 1445 aa11.9□□□□□ -0.5
CHD2-209ENST00000627185 SHROOM2Q13796 1616 aa11.89□□□□□ -0.51
CHD2-209ENST00000627185 MBD5Q9P267 1494 aa11.89□□□□□ -0.51
CHD2-209ENST00000627185 KIAA1107Q9UPP5 1409 aa11.89□□□□□ -0.51
CHD2-209ENST00000627185 PLEKHD1A6NEE1 506 aa11.89□□□□□ -0.51
CHD2-209ENST00000627185 PPP1R37O75864 691 aa11.89□□□□□ -0.51
CHD2-209ENST00000627185 MKRN3Q13064 507 aaKnown RBP11.89□□□□□ -0.51
CHD2-209ENST00000627185 DDX10Q13206 875 aaKnown RBP11.89□□□□□ -0.51
CHD2-209ENST00000627185 MS4A4AQ96JQ5 239 aa11.89□□□□□ -0.51
CHD2-209ENST00000627185 UHRF1BP1Q6BDS2 1440 aa11.88□□□□□ -0.51
CHD2-209ENST00000627185 EIF4G2P78344 907 aaKnown RBP eCLIP11.88□□□□□ -0.51
CHD2-209ENST00000627185 BCANQ96GW7 911 aa11.87□□□□□ -0.51
CHD2-209ENST00000627185 ARHGEF12Q9NZN5 1544 aa11.86□□□□□ -0.51
CHD2-209ENST00000627185 ILDR1Q86SU0 546 aaPredicted RBP11.86□□□□□ -0.51
CHD2-209ENST00000627185 CADPS2Q86UW7 1296 aa11.86□□□□□ -0.51
CHD2-209ENST00000627185 L3MBTL2Q969R5 705 aa11.86□□□□□ -0.51
CHD2-209ENST00000627185 CHIC2Q9UKJ5 165 aa11.86□□□□□ -0.51
CHD2-209ENST00000627185 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
CHD2-209ENST00000627185 ANKRD50Q9ULJ7 1429 aa11.86□□□□□ -0.51
CHD2-209ENST00000627185 MAST1Q9Y2H9 1570 aa11.85□□□□□ -0.51
CHD2-209ENST00000627185 TRIM52Q96A61 297 aa11.85□□□□□ -0.51
CHD2-209ENST00000627185 ZNF644Q9H582 1327 aaPredicted RBP11.85□□□□□ -0.51
CHD2-209ENST00000627185 PLEKHH2Q8IVE3 1493 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms