RNA–Protein interactions for RNA: ENST00000627179.1

LINC01338-201, Transcript of long intergenic non-protein coding RNA 1338, humanhuman

TSL 3 BASIC

Gene LINC01338, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01338-201ENST00000627179 HCSTQ9UBK5 93 aa12□□□□□ -0.49
LINC01338-201ENST00000627179 PPP1R3GB7ZBB8 358 aa11.99□□□□□ -0.49
LINC01338-201ENST00000627179 BHMG1C9JSJ3 638 aaPredicted RBP11.99□□□□□ -0.49
LINC01338-201ENST00000627179 C6orf132Q5T0Z8 1188 aa11.94□□□□□ -0.5
LINC01338-201ENST00000627179 DDX12PQ92771 950 aa11.94□□□□□ -0.5
LINC01338-201ENST00000627179 COL9A1P20849 921 aa11.93□□□□□ -0.5
LINC01338-201ENST00000627179 KCTD12Q96CX2 325 aaKnown RBP11.93□□□□□ -0.5
LINC01338-201ENST00000627179 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
LINC01338-201ENST00000627179 MRPL50Q8N5N7 158 aaKnown RBP11.92□□□□□ -0.5
LINC01338-201ENST00000627179 TSHZ2Q9NRE2 1034 aa11.92□□□□□ -0.5
LINC01338-201ENST00000627179 ONECUT3O60422 494 aaPredicted RBP11.91□□□□□ -0.5
LINC01338-201ENST00000627179 RABGEF1Q9UJ41 708 aa11.91□□□□□ -0.5
LINC01338-201ENST00000627179 GOLGA8CPA6NN73 597 aa11.89□□□□□ -0.51
LINC01338-201ENST00000627179 EN1Q05925 392 aaPredicted RBP11.88□□□□□ -0.51
LINC01338-201ENST00000627179 NBR1Q14596 966 aa11.88□□□□□ -0.51
LINC01338-201ENST00000627179 RBM33Q96EV2 1170 aaKnown RBP11.88□□□□□ -0.51
LINC01338-201ENST00000627179 PROX2Q3B8N5 592 aa11.87□□□□□ -0.51
LINC01338-201ENST00000627179 MAP3K7O43318 606 aa11.84□□□□□ -0.51
LINC01338-201ENST00000627179 LAPTM4BQ86VI4 370 aa11.84□□□□□ -0.51
LINC01338-201ENST00000627179 WNT2BQ93097 391 aa11.84□□□□□ -0.51
LINC01338-201ENST00000627179 THSD4Q6ZMP0 1018 aa11.83□□□□□ -0.52
LINC01338-201ENST00000627179 KIAA1468Q9P260 1216 aa11.83□□□□□ -0.52
LINC01338-201ENST00000627179 GRXCR2A6NFK2 248 aa11.82□□□□□ -0.52
LINC01338-201ENST00000627179 TRIM6-TRIM34B2RNG4 842 aa11.82□□□□□ -0.52
LINC01338-201ENST00000627179 ARHGEF1Q92888 912 aaKnown RBP11.82□□□□□ -0.52
LINC01338-201ENST00000627179 PTPN5P54829 565 aa11.81□□□□□ -0.52
LINC01338-201ENST00000627179 PLA2G2EQ9NZK7 142 aa11.81□□□□□ -0.52
LINC01338-201ENST00000627179 TSR1Q2NL82 804 aaKnown RBP11.8□□□□□ -0.52
LINC01338-201ENST00000627179 CERKQ8TCT0 537 aa11.8□□□□□ -0.52
LINC01338-201ENST00000627179 OSBPP22059 807 aa11.78□□□□□ -0.52
LINC01338-201ENST00000627179 ANKK1Q8NFD2 765 aa11.78□□□□□ -0.52
LINC01338-201ENST00000627179 PLCB2Q00722 1185 aa11.76□□□□□ -0.53
LINC01338-201ENST00000627179 PACS2Q86VP3 889 aa11.76□□□□□ -0.53
LINC01338-201ENST00000627179 PRIM1P49642 420 aaKnown RBP11.75□□□□□ -0.53
LINC01338-201ENST00000627179 KCNV2Q8TDN2 545 aa11.74□□□□□ -0.53
LINC01338-201ENST00000627179 ZFRQ96KR1 1074 aaKnown RBP11.74□□□□□ -0.53
LINC01338-201ENST00000627179 PRSS12P56730 875 aa11.73□□□□□ -0.53
LINC01338-201ENST00000627179 FAM98CQ17RN3 349 aaKnown RBP11.73□□□□□ -0.53
LINC01338-201ENST00000627179 CDCA7LQ96GN5 454 aa11.73□□□□□ -0.53
LINC01338-201ENST00000627179 TSKSQ9UJT2 592 aa11.73□□□□□ -0.53
LINC01338-201ENST00000627179 P3H3Q8IVL6 736 aa11.72□□□□□ -0.53
LINC01338-201ENST00000627179 SEPT9Q9UHD8 586 aaPredicted RBP11.72□□□□□ -0.53
LINC01338-201ENST00000627179 SOWAHBA6NEL2 793 aa11.71□□□□□ -0.53
LINC01338-201ENST00000627179 RBM27Q9P2N5 1060 aaKnown RBP11.69□□□□□ -0.54
LINC01338-201ENST00000627179 IFFO2Q5TF58 517 aa11.68□□□□□ -0.54
LINC01338-201ENST00000627179 BCAMP50895 628 aa11.67□□□□□ -0.54
LINC01338-201ENST00000627179 NYAP1Q6ZVC0 841 aa11.67□□□□□ -0.54
LINC01338-201ENST00000627179 CDHR5Q9HBB8 845 aa11.66□□□□□ -0.54
LINC01338-201ENST00000627179 FAM198AQ9UFP1 575 aa11.65□□□□□ -0.54
LINC01338-201ENST00000627179 NBPF26B4DH59 902 aa11.64□□□□□ -0.55
LINC01338-201ENST00000627179 MLLT3P42568 568 aaPredicted RBP11.64□□□□□ -0.55
LINC01338-201ENST00000627179 LRCH3Q96II8 777 aa11.64□□□□□ -0.55
LINC01338-201ENST00000627179 NPDC1Q9NQX5 325 aaPredicted RBP11.64□□□□□ -0.55
LINC01338-201ENST00000627179 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.64□□□□□ -0.55
LINC01338-201ENST00000627179 TATDN2Q93075 761 aa11.63□□□□□ -0.55
LINC01338-201ENST00000627179 TSR3Q9UJK0 312 aaKnown RBP11.62□□□□□ -0.55
LINC01338-201ENST00000627179 TTC13Q8NBP0 860 aa11.61□□□□□ -0.55
LINC01338-201ENST00000627179 PNMA3Q9UL41 463 aa11.61□□□□□ -0.55
LINC01338-201ENST00000627179 SMAPO00193 183 aa11.6□□□□□ -0.55
LINC01338-201ENST00000627179 WBP1LQ9NX94 342 aa11.6□□□□□ -0.55
LINC01338-201ENST00000627179 HPS5Q9UPZ3 1129 aa11.58□□□□□ -0.56
LINC01338-201ENST00000627179 C3orf80F5H4A9 247 aa11.57□□□□□ -0.56
LINC01338-201ENST00000627179 ITGBL1O95965 494 aaPredicted RBP11.57□□□□□ -0.56
LINC01338-201ENST00000627179 HDGFP51858 240 aaKnown RBP11.57□□□□□ -0.56
LINC01338-201ENST00000627179 NUDT18Q6ZVK8 323 aa11.57□□□□□ -0.56
LINC01338-201ENST00000627179 NISCHQ9Y2I1 1504 aa11.56□□□□□ -0.56
LINC01338-201ENST00000627179 PADI6Q6TGC4 694 aa11.56□□□□□ -0.56
LINC01338-201ENST00000627179 HAP1P54257 671 aaPredicted RBP11.55□□□□□ -0.56
LINC01338-201ENST00000627179 PPP4CP60510 307 aa11.55□□□□□ -0.56
LINC01338-201ENST00000627179 SAMD7Q7Z3H4 446 aa11.55□□□□□ -0.56
LINC01338-201ENST00000627179 SEMA3EO15041 775 aa11.54□□□□□ -0.56
LINC01338-201ENST00000627179 PTGDRQ13258 359 aa11.54□□□□□ -0.56
LINC01338-201ENST00000627179 RGS20O76081 388 aa11.53□□□□□ -0.56
LINC01338-201ENST00000627179 A0A0G2JS52 829 aa11.51□□□□□ -0.57
LINC01338-201ENST00000627179 NUTM2FA1L443 756 aa11.49□□□□□ -0.57
LINC01338-201ENST00000627179 SMYD5Q6GMV2 418 aa11.49□□□□□ -0.57
LINC01338-201ENST00000627179 NECTIN2Q92692 538 aa11.49□□□□□ -0.57
LINC01338-201ENST00000627179 EYA1Q99502 592 aa11.49□□□□□ -0.57
LINC01338-201ENST00000627179 TESPA1A2RU30 521 aaPredicted RBP11.48□□□□□ -0.57
LINC01338-201ENST00000627179 KCNC4Q03721 635 aa11.48□□□□□ -0.57
LINC01338-201ENST00000627179 FCHSD2O94868 740 aa11.46□□□□□ -0.57
LINC01338-201ENST00000627179 SLF2Q8IX21 1173 aa11.45□□□□□ -0.58
LINC01338-201ENST00000627179 KDM2AQ9Y2K7 1162 aa11.45□□□□□ -0.58
LINC01338-201ENST00000627179 SLC4A3P48751 1232 aa11.44□□□□□ -0.58
LINC01338-201ENST00000627179 SWT1Q5T5J6 900 aaKnown RBP11.44□□□□□ -0.58
LINC01338-201ENST00000627179 VSIG10Q8N0Z9 540 aa11.43□□□□□ -0.58
LINC01338-201ENST00000627179 RBM46Q8TBY0 533 aaKnown RBP11.43□□□□□ -0.58
LINC01338-201ENST00000627179 RNF40O75150 1001 aa11.42□□□□□ -0.58
LINC01338-201ENST00000627179 ADGRG1Q9Y653 693 aa11.42□□□□□ -0.58
LINC01338-201ENST00000627179 DNAJB2P25686 324 aa11.41□□□□□ -0.58
LINC01338-201ENST00000627179 TJAP1Q5JTD0 557 aa11.4□□□□□ -0.58
LINC01338-201ENST00000627179 HIC1Q14526 733 aa11.39□□□□□ -0.59
LINC01338-201ENST00000627179 RBM26Q5T8P6 1007 aaKnown RBP11.38□□□□□ -0.59
LINC01338-201ENST00000627179 IL21Q9HBE4 155 aa11.38□□□□□ -0.59
LINC01338-201ENST00000627179 APLP1P51693 650 aa11.37□□□□□ -0.59
LINC01338-201ENST00000627179 MTRQ99707 1265 aa11.37□□□□□ -0.59
LINC01338-201ENST00000627179 OATP04181 439 aa11.36□□□□□ -0.59
LINC01338-201ENST00000627179 PRR14Q9BWN1 585 aa11.36□□□□□ -0.59
LINC01338-201ENST00000627179 TMEM134Q9H6X4 195 aa11.36□□□□□ -0.59
LINC01338-201ENST00000627179 RCCD1A6NED2 376 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms