RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 APAF1O14727 1248 aa22.24■■□□□ 1.15
FARP1-242ENST00000627049 HNRNPMP52272 730 aaKnown RBP eCLIP22.22■■□□□ 1.157e-7■■■□□ 15.6
FARP1-242ENST00000627049 CCDC144AA2RUR9 1427 aa22.22■■□□□ 1.15
FARP1-242ENST00000627049 CHMP5Q9NZZ3 219 aa22.22■■□□□ 1.15
FARP1-242ENST00000627049 FOXD4L1Q9NU39 408 aa22.22■■□□□ 1.15
FARP1-242ENST00000627049 EIF3AQ14152 1382 aaKnown RBP22.22■■□□□ 1.15
FARP1-242ENST00000627049 KIAA2012Q0VF49 1180 aa22.21■■□□□ 1.15
FARP1-242ENST00000627049 SKOR2Q2VWA4 1001 aaPredicted RBP22.21■■□□□ 1.15
FARP1-242ENST00000627049 ARID3AQ99856 593 aa22.21■■□□□ 1.15
FARP1-242ENST00000627049 FYCO1Q9BQS8 1478 aa22.21■■□□□ 1.15
FARP1-242ENST00000627049 KANK1Q14678 1352 aa22.21■■□□□ 1.15
FARP1-242ENST00000627049 FGD5Q6ZNL6 1462 aa22.2■■□□□ 1.14
FARP1-242ENST00000627049 POGKQ9P215 609 aa22.2■■□□□ 1.14
FARP1-242ENST00000627049 MCCP23508 829 aa22.2■■□□□ 1.14
FARP1-242ENST00000627049 FAM43AQ8N2R8 423 aa22.19■■□□□ 1.14
FARP1-242ENST00000627049 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.19■■□□□ 1.142e-8■■■□□ 18.4
FARP1-242ENST00000627049 PLPPR3Q6T4P5 718 aa22.19■■□□□ 1.14
FARP1-242ENST00000627049 BCL2L13Q9BXK5 485 aa22.18■■□□□ 1.14
FARP1-242ENST00000627049 CARMIL2Q6F5E8 1435 aa22.17■■□□□ 1.14
FARP1-242ENST00000627049 MIA2Q96PC5 1412 aa22.17■■□□□ 1.14
FARP1-242ENST00000627049 NGEFQ8N5V2 710 aa22.17■■□□□ 1.14
FARP1-242ENST00000627049 TOP2BQ02880 1626 aa22.17■■□□□ 1.14
FARP1-242ENST00000627049 RSPH4AQ5TD94 716 aa22.17■■□□□ 1.14
FARP1-242ENST00000627049 RRP7AQ9Y3A4 280 aaKnown RBP22.17■■□□□ 1.14
FARP1-242ENST00000627049 ZRSR1Q15695 479 aaKnown RBP22.16■■□□□ 1.14
FARP1-242ENST00000627049 DDX49Q9Y6V7 483 aaKnown RBP22.15■■□□□ 1.14
FARP1-242ENST00000627049 ZBTB7CA1YPR0 619 aa22.15■■□□□ 1.14
FARP1-242ENST00000627049 SYAP1Q96A49 352 aaPredicted RBP22.15■■□□□ 1.14
FARP1-242ENST00000627049 SRPK2P78362 688 aaKnown RBP22.14■■□□□ 1.14
FARP1-242ENST00000627049 ZNF644Q9H582 1327 aaPredicted RBP22.13■■□□□ 1.13
FARP1-242ENST00000627049 ZKSCAN2Q63HK3 967 aa22.13■■□□□ 1.13
FARP1-242ENST00000627049 ADAMTS8Q9UP79 889 aa22.13■■□□□ 1.13
FARP1-242ENST00000627049 APBB1O00213 710 aa22.12■■□□□ 1.13
FARP1-242ENST00000627049 HAP1P54257 671 aaPredicted RBP22.12■■□□□ 1.13
FARP1-242ENST00000627049 CDK11BP21127 795 aaKnown RBP22.11■■□□□ 1.13
FARP1-242ENST00000627049 PDS5BQ9NTI5 1447 aa22.11■■□□□ 1.13
FARP1-242ENST00000627049 MRE11P49959 708 aa22.1■■□□□ 1.13
FARP1-242ENST00000627049 GOLGA6L4A6NEF3 574 aa22.1■■□□□ 1.13
FARP1-242ENST00000627049 C11orf95C9JLR9 678 aaPredicted RBP22.1■■□□□ 1.13
FARP1-242ENST00000627049 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
FARP1-242ENST00000627049 SAFB2Q14151 953 aaKnown RBP eCLIP22.08■■□□□ 1.13
FARP1-242ENST00000627049 CFTRP13569 1480 aa22.08■■□□□ 1.13
FARP1-242ENST00000627049 NAIPQ13075 1403 aa22.08■■□□□ 1.13
FARP1-242ENST00000627049 AAMPQ13685 434 aa22.06■■□□□ 1.12
FARP1-242ENST00000627049 C22orf23Q9BZE7 217 aa22.06■■□□□ 1.12
FARP1-242ENST00000627049 WASHC2CQ9Y4E1 1318 aa22.05■■□□□ 1.12
FARP1-242ENST00000627049 GOLGA6L6A8MZA4 724 aa22.05■■□□□ 1.12
FARP1-242ENST00000627049 DRC7Q8IY82 874 aa22.05■■□□□ 1.12
FARP1-242ENST00000627049 PANK1Q8TE04 598 aa22.04■■□□□ 1.12
FARP1-242ENST00000627049 ST18O60284 1047 aa22.04■■□□□ 1.12
FARP1-242ENST00000627049 KCNJ4P48050 445 aa22.03■■□□□ 1.12
FARP1-242ENST00000627049 RAD54L2Q9Y4B4 1467 aa22.03■■□□□ 1.12
FARP1-242ENST00000627049 TRAK2O60296 914 aa22.03■■□□□ 1.12
FARP1-242ENST00000627049 ANKRD45Q5TZF3 282 aa22.02■■□□□ 1.12
FARP1-242ENST00000627049 MAPKBP1O60336 1514 aa22.02■■□□□ 1.12
FARP1-242ENST00000627049 NRDCO43847 1150 aa22.01■■□□□ 1.11
FARP1-242ENST00000627049 DZIP1LQ8IYY4 767 aaKnown RBP22.01■■□□□ 1.11
FARP1-242ENST00000627049 EFCAB2Q5VUJ9 269 aa22.01■■□□□ 1.11
FARP1-242ENST00000627049 DDX19BQ9UMR2 479 aa22.01■■□□□ 1.11
FARP1-242ENST00000627049 MAP3K1Q13233 1512 aa22.01■■□□□ 1.11
FARP1-242ENST00000627049 HDGFL2Q7Z4V5 671 aaPredicted RBP22■■□□□ 1.11
FARP1-242ENST00000627049 EFCAB5A4FU69 1503 aa22■■□□□ 1.11
FARP1-242ENST00000627049 OS9Q13438 667 aaPredicted RBP22■■□□□ 1.11
FARP1-242ENST00000627049 ANKRD50Q9ULJ7 1429 aa21.99■■□□□ 1.11
FARP1-242ENST00000627049 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.98■■□□□ 1.11
FARP1-242ENST00000627049 NCOA1Q15788 1441 aa21.97■■□□□ 1.11
FARP1-242ENST00000627049 PHF14O94880 888 aa21.97■■□□□ 1.11
FARP1-242ENST00000627049 FAM13BQ9NYF5 915 aa21.97■■□□□ 1.11
FARP1-242ENST00000627049 PDE3AQ14432 1141 aa21.96■■□□□ 1.11
FARP1-242ENST00000627049 STK26Q9P289 416 aa21.96■■□□□ 1.11
FARP1-242ENST00000627049 NCAPD3P42695 1498 aa21.95■■□□□ 1.1
FARP1-242ENST00000627049 PPP2R1AP30153 589 aa21.95■■□□□ 1.1
FARP1-242ENST00000627049 KIAA1211Q6ZU35 1233 aa21.94■■□□□ 1.1
FARP1-242ENST00000627049 GAPVD1Q14C86 1478 aa21.94■■□□□ 1.1
FARP1-242ENST00000627049 FGD1P98174 961 aa21.94■■□□□ 1.1
FARP1-242ENST00000627049 RUNDC1Q96C34 613 aa21.94■■□□□ 1.1
FARP1-242ENST00000627049 FOXD4L5Q5VV16 416 aaPredicted RBP21.94■■□□□ 1.1
FARP1-242ENST00000627049 FOXD4L4Q8WXT5 416 aaPredicted RBP21.94■■□□□ 1.1
FARP1-242ENST00000627049 KIAA1107Q9UPP5 1409 aa21.93■■□□□ 1.1
FARP1-242ENST00000627049 EHBP1L1Q8N3D4 1523 aa21.93■■□□□ 1.1
FARP1-242ENST00000627049 HMMRO75330 724 aa21.93■■□□□ 1.1
FARP1-242ENST00000627049 TRAK1Q9UPV9 953 aa21.92■■□□□ 1.1
FARP1-242ENST00000627049 BCAR3O75815 825 aa21.91■■□□□ 1.1
FARP1-242ENST00000627049 JPH4Q96JJ6 628 aa21.91■■□□□ 1.1
FARP1-242ENST00000627049 PDZRN3Q9UPQ7 1066 aa21.91■■□□□ 1.1
FARP1-242ENST00000627049 KIF3BO15066 747 aa21.91■■□□□ 1.1
FARP1-242ENST00000627049 CSPP1Q1MSJ5 1256 aa21.91■■□□□ 1.1
FARP1-242ENST00000627049 SKAP1Q86WV1 359 aa21.9■■□□□ 1.1
FARP1-242ENST00000627049 PKNOX2Q96KN3 472 aa21.9■■□□□ 1.1
FARP1-242ENST00000627049 TERF2IPQ9NYB0 399 aa21.9■■□□□ 1.1
FARP1-242ENST00000627049 NASPP49321 788 aaPredicted RBP21.9■■□□□ 1.1
FARP1-242ENST00000627049 NOL8Q76FK4 1167 aaKnown RBP21.9■■□□□ 1.1
FARP1-242ENST00000627049 TPM2P07951 284 aa21.89■■□□□ 1.09
FARP1-242ENST00000627049 GGT6Q6P531 493 aa21.89■■□□□ 1.09
FARP1-242ENST00000627049 C14orf37Q86TY3 774 aa21.89■■□□□ 1.09
FARP1-242ENST00000627049 LNPKQ9C0E8 428 aa21.88■■□□□ 1.09
FARP1-242ENST00000627049 NBPF1Q3BBV0 1214 aa21.88■■□□□ 1.09
FARP1-242ENST00000627049 NUCB2P80303 420 aa21.88■■□□□ 1.09
FARP1-242ENST00000627049 ISY1Q9ULR0 285 aaKnown RBP21.88■■□□□ 1.09
FARP1-242ENST00000627049 TRIM6-TRIM34B2RNG4 842 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms