RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 YY1AP1Q9H869 796 aa6.71□□□□□ -1.34
CHD2-204ENST00000625463 CWC22Q9HCG8 908 aaKnown RBP6.71□□□□□ -1.34
CHD2-204ENST00000625463 CLCN1P35523 988 aa6.7□□□□□ -1.34
CHD2-204ENST00000625463 SLC20A2Q08357 652 aa6.7□□□□□ -1.34
CHD2-204ENST00000625463 RALBP1Q15311 655 aa6.7□□□□□ -1.34
CHD2-204ENST00000625463 DNTTIP2Q5QJE6 756 aaKnown RBP6.7□□□□□ -1.34
CHD2-204ENST00000625463 NBPF11Q86T75 865 aa6.7□□□□□ -1.34
CHD2-204ENST00000625463 TTC36A6NLP5 189 aa6.69□□□□□ -1.34
CHD2-204ENST00000625463 TCERG1O14776 1098 aaKnown RBP6.69□□□□□ -1.34
CHD2-204ENST00000625463 PAK3O75914 559 aaPredicted RBP6.69□□□□□ -1.34
CHD2-204ENST00000625463 DMTNQ08495 405 aa6.69□□□□□ -1.34
CHD2-204ENST00000625463 DDRGK1Q96HY6 314 aa6.69□□□□□ -1.34
CHD2-204ENST00000625463 SGIP1Q9BQI5 828 aa6.69□□□□□ -1.34
CHD2-204ENST00000625463 STK24Q9Y6E0 443 aa6.69□□□□□ -1.34
CHD2-204ENST00000625463 CCDC61Q9Y6R9 512 aa6.69□□□□□ -1.34
CHD2-204ENST00000625463 GTPBP6O43824 516 aaPredicted RBP6.68□□□□□ -1.34
CHD2-204ENST00000625463 LETM1O95202 739 aaPredicted RBP6.68□□□□□ -1.34
CHD2-204ENST00000625463 NBPF1Q3BBV0 1214 aa6.68□□□□□ -1.34
CHD2-204ENST00000625463 GTPBP4Q9BZE4 634 aaKnown RBP6.68□□□□□ -1.34
CHD2-204ENST00000625463 PCDHB8Q9UN66 801 aa6.68□□□□□ -1.34
CHD2-204ENST00000625463 PCDHB13Q9Y5F0 798 aa6.68□□□□□ -1.34
CHD2-204ENST00000625463 HSP90AB3PQ58FF7 597 aa6.67□□□□□ -1.34
CHD2-204ENST00000625463 L1TD1Q5T7N2 865 aaKnown RBP6.67□□□□□ -1.34
CHD2-204ENST00000625463 CASC1Q6TDU7 716 aa6.67□□□□□ -1.34
CHD2-204ENST00000625463 CARD10Q9BWT7 1032 aa6.67□□□□□ -1.34
CHD2-204ENST00000625463 GEMIN8Q9NWZ8 242 aaKnown RBP6.67□□□□□ -1.34
CHD2-204ENST00000625463 PLEKHD1A6NEE1 506 aa6.66□□□□□ -1.34
CHD2-204ENST00000625463 CCDC27Q2M243 656 aa6.66□□□□□ -1.34
CHD2-204ENST00000625463 HSP90AB4PQ58FF6 505 aa6.66□□□□□ -1.34
CHD2-204ENST00000625463 EGFL6Q8IUX8 553 aa6.65□□□□□ -1.34
CHD2-204ENST00000625463 VGLL3A8MV65 326 aa6.64□□□□□ -1.35
CHD2-204ENST00000625463 TERF1P54274 439 aa6.64□□□□□ -1.35
CHD2-204ENST00000625463 ZNF467Q7Z7K2 595 aaPredicted RBP6.64□□□□□ -1.35
CHD2-204ENST00000625463 SLC52A1Q9NWF4 448 aa6.64□□□□□ -1.35
CHD2-204ENST00000625463 NBPF9Q3BBW0 867 aa6.63□□□□□ -1.35
CHD2-204ENST00000625463 RRAGDQ9NQL2 400 aaPredicted RBP6.63□□□□□ -1.35
CHD2-204ENST00000625463 SOX12O15370 315 aa6.62□□□□□ -1.35
CHD2-204ENST00000625463 ITGAEP38570 1179 aa6.62□□□□□ -1.35
CHD2-204ENST00000625463 SSR1P43307 286 aaKnown RBP6.62□□□□□ -1.35
CHD2-204ENST00000625463 TSPYL1Q9H0U9 437 aa6.62□□□□□ -1.35
CHD2-204ENST00000625463 ZHX1Q9UKY1 873 aaPredicted RBP6.62□□□□□ -1.35
CHD2-204ENST00000625463 MAP3K13O43283 966 aa6.61□□□□□ -1.35
CHD2-204ENST00000625463 PDAP1Q13442 181 aaKnown RBP6.61□□□□□ -1.35
CHD2-204ENST00000625463 IFNL1Q8IU54 200 aa6.61□□□□□ -1.35
CHD2-204ENST00000625463 RBM28Q9NW13 759 aaKnown RBP6.61□□□□□ -1.35
CHD2-204ENST00000625463 RAI14Q9P0K7 980 aa6.61□□□□□ -1.35
CHD2-204ENST00000625463 SH3BP1Q9Y3L3 701 aa6.61□□□□□ -1.35
CHD2-204ENST00000625463 NRDCO43847 1150 aa6.6□□□□□ -1.35
CHD2-204ENST00000625463 ZNF579Q8NAF0 562 aaKnown RBP6.6□□□□□ -1.35
CHD2-204ENST00000625463 FRAT1Q92837 279 aaPredicted RBP6.6□□□□□ -1.35
CHD2-204ENST00000625463 KIF12Q96FN5 646 aa6.6□□□□□ -1.35
CHD2-204ENST00000625463 PPP4R2Q9NY27 417 aa6.6□□□□□ -1.35
CHD2-204ENST00000625463 TERF2IPQ9NYB0 399 aa6.6□□□□□ -1.35
CHD2-204ENST00000625463 EXOC8Q8IYI6 725 aa6.59□□□□□ -1.35
CHD2-204ENST00000625463 FAM177A1Q8N128 213 aaPredicted RBP6.59□□□□□ -1.35
CHD2-204ENST00000625463 PHF12Q96QT6 1004 aa6.59□□□□□ -1.35
CHD2-204ENST00000625463 BSDC1Q9NW68 430 aaPredicted RBP6.59□□□□□ -1.35
CHD2-204ENST00000625463 ZRANB1Q9UGI0 708 aa6.59□□□□□ -1.35
CHD2-204ENST00000625463 CD44P16070 742 aaKnown RBP6.58□□□□□ -1.36
CHD2-204ENST00000625463 LMOD3Q0VAK6 560 aa6.58□□□□□ -1.36
CHD2-204ENST00000625463 FAM50AQ14320 339 aaKnown RBP6.58□□□□□ -1.36
CHD2-204ENST00000625463 TMTC2Q8N394 836 aa6.58□□□□□ -1.36
CHD2-204ENST00000625463 OTUD6BQ8N6M0 293 aa6.58□□□□□ -1.36
CHD2-204ENST00000625463 SATB1Q01826 763 aa6.57□□□□□ -1.36
CHD2-204ENST00000625463 NBPF10Q6P3W6 841 aaKnown RBP6.57□□□□□ -1.36
CHD2-204ENST00000625463 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.57□□□□□ -1.36
CHD2-204ENST00000625463 BANK1Q8NDB2 785 aa6.57□□□□□ -1.36
CHD2-204ENST00000625463 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.57□□□□□ -1.36
CHD2-204ENST00000625463 SEMA3FQ13275 785 aa6.56□□□□□ -1.36
CHD2-204ENST00000625463 ZKSCAN8Q15776 578 aaPredicted RBP6.56□□□□□ -1.36
CHD2-204ENST00000625463 NBPF6Q5VWK0 638 aa6.56□□□□□ -1.36
CHD2-204ENST00000625463 NBPF5PQ86XG9 351 aaPredicted RBP6.56□□□□□ -1.36
CHD2-204ENST00000625463 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.56□□□□□ -1.36
CHD2-204ENST00000625463 NBPF4Q96M43 638 aa6.56□□□□□ -1.36
CHD2-204ENST00000625463 MFRPQ9BY79 579 aa6.56□□□□□ -1.36
CHD2-204ENST00000625463 GOLIM4O00461 696 aa6.55□□□□□ -1.36
CHD2-204ENST00000625463 CALRP27797 417 aaKnown RBP6.55□□□□□ -1.36
CHD2-204ENST00000625463 MAP2K1Q02750 393 aaPredicted RBP6.55□□□□□ -1.36
CHD2-204ENST00000625463 SETDB1Q15047 1291 aa6.55□□□□□ -1.36
CHD2-204ENST00000625463 TSHZ1Q6ZSZ6 1077 aa6.55□□□□□ -1.36
CHD2-204ENST00000625463 FAM9BQ8IZU0 186 aa6.55□□□□□ -1.36
CHD2-204ENST00000625463 EFCC1Q9HA90 598 aa6.55□□□□□ -1.36
CHD2-204ENST00000625463 ZNF500O60304 480 aaPredicted RBP6.54□□□□□ -1.36
CHD2-204ENST00000625463 ARID4AP29374 1257 aaPredicted RBP6.54□□□□□ -1.36
CHD2-204ENST00000625463 RINLQ6ZS11 566 aa6.54□□□□□ -1.36
CHD2-204ENST00000625463 NECTIN2Q92692 538 aa6.54□□□□□ -1.36
CHD2-204ENST00000625463 ZCCHC6Q5VYS8 1495 aaKnown RBP6.53□□□□□ -1.36
CHD2-204ENST00000625463 EEA1Q15075 1411 aa6.53□□□□□ -1.36
CHD2-204ENST00000625463 E9PSI1 815 aa6.53□□□□□ -1.36
CHD2-204ENST00000625463 HDAC1Q13547 482 aaPredicted RBP6.53□□□□□ -1.36
CHD2-204ENST00000625463 CADPS2Q86UW7 1296 aa6.53□□□□□ -1.36
CHD2-204ENST00000625463 EFCAB3Q8N7B9 438 aa6.53□□□□□ -1.36
CHD2-204ENST00000625463 CABP2Q9NPB3 220 aa6.53□□□□□ -1.36
CHD2-204ENST00000625463 RYDENQ9NUL5 291 aaKnown RBP6.53□□□□□ -1.36
CHD2-204ENST00000625463 ESPNB1AK53 854 aa6.52□□□□□ -1.37
CHD2-204ENST00000625463 RAD21O60216 631 aa6.52□□□□□ -1.37
CHD2-204ENST00000625463 ZSCAN20P17040 1043 aaPredicted RBP6.52□□□□□ -1.37
CHD2-204ENST00000625463 CCDC96Q2M329 555 aa6.52□□□□□ -1.37
CHD2-204ENST00000625463 NGEFQ8N5V2 710 aa6.52□□□□□ -1.37
CHD2-204ENST00000625463 TRPC6Q9Y210 931 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms