RNA–Protein interactions for RNA: ENST00000624683.1

KDM4B-212, Transcript of lysine demethylase 4B, humanhuman

Gene KDM4B, Length 5,076 nt, Biotype TEC, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-212ENST00000624683 TOPBP1Q92547 1522 aa18.33■□□□□ 0.53
KDM4B-212ENST00000624683 CCDC7Q96M83 1385 aa18.33■□□□□ 0.53
KDM4B-212ENST00000624683 DNTTIP2Q5QJE6 756 aaKnown RBP18.33■□□□□ 0.53
KDM4B-212ENST00000624683 APBB1O00213 710 aa18.33■□□□□ 0.52
KDM4B-212ENST00000624683 CDK11BP21127 795 aaKnown RBP18.33■□□□□ 0.52
KDM4B-212ENST00000624683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.33■□□□□ 0.52
KDM4B-212ENST00000624683 CLUAP1Q96AJ1 413 aa18.32■□□□□ 0.52
KDM4B-212ENST00000624683 EVC2Q86UK5 1308 aa18.32■□□□□ 0.52
KDM4B-212ENST00000624683 MCCP23508 829 aa18.32■□□□□ 0.52
KDM4B-212ENST00000624683 NAP1L5Q96NT1 182 aaPredicted RBP18.32■□□□□ 0.52
KDM4B-212ENST00000624683 KIF7Q2M1P5 1343 aa18.32■□□□□ 0.52
KDM4B-212ENST00000624683 DEKP35659 375 aaKnown RBP18.31■□□□□ 0.52
KDM4B-212ENST00000624683 FGD1P98174 961 aa18.31■□□□□ 0.52
KDM4B-212ENST00000624683 POLA1P09884 1462 aaPredicted RBP18.31■□□□□ 0.52
KDM4B-212ENST00000624683 CGNL1Q0VF96 1302 aa18.31■□□□□ 0.52
KDM4B-212ENST00000624683 NGDNQ8NEJ9 315 aaKnown RBP18.3■□□□□ 0.52
KDM4B-212ENST00000624683 SPRYD3Q8NCJ5 442 aa18.3■□□□□ 0.52
KDM4B-212ENST00000624683 CC2D2AQ9P2K1 1620 aa18.3■□□□□ 0.52
KDM4B-212ENST00000624683 LMOD3Q0VAK6 560 aa18.29■□□□□ 0.52
KDM4B-212ENST00000624683 RRP7AQ9Y3A4 280 aaKnown RBP18.29■□□□□ 0.52
KDM4B-212ENST00000624683 CYB5RLQ6IPT4 315 aa18.28■□□□□ 0.52
KDM4B-212ENST00000624683 STK31Q9BXU1 1019 aa18.28■□□□□ 0.52
KDM4B-212ENST00000624683 STAC3Q96MF2 364 aa18.28■□□□□ 0.52
KDM4B-212ENST00000624683 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
KDM4B-212ENST00000624683 CHMP4AQ9BY43 222 aa18.27■□□□□ 0.52
KDM4B-212ENST00000624683 NUTM2FA1L443 756 aa18.26■□□□□ 0.51
KDM4B-212ENST00000624683 CNTLNQ9NXG0 1405 aa18.25■□□□□ 0.51
KDM4B-212ENST00000624683 E9PSI1 815 aa18.25■□□□□ 0.51
KDM4B-212ENST00000624683 RRP1P56182 461 aaKnown RBP18.25■□□□□ 0.51
KDM4B-212ENST00000624683 IFT140Q96RY7 1462 aa18.25■□□□□ 0.51
KDM4B-212ENST00000624683 CSB-PGBD3P0DP91 1061 aa18.25■□□□□ 0.51
KDM4B-212ENST00000624683 EHBP1L1Q8N3D4 1523 aa18.24■□□□□ 0.51
KDM4B-212ENST00000624683 AMPHP49418 695 aa18.24■□□□□ 0.51
KDM4B-212ENST00000624683 MIA2Q96PC5 1412 aa18.24■□□□□ 0.51
KDM4B-212ENST00000624683 RTN4Q9NQC3 1192 aaKnown RBP18.24■□□□□ 0.51
KDM4B-212ENST00000624683 TIAM1Q13009 1591 aa18.24■□□□□ 0.51
KDM4B-212ENST00000624683 SYNJ2O15056 1496 aa18.24■□□□□ 0.51
KDM4B-212ENST00000624683 MINK1Q8N4C8 1332 aaPredicted RBP18.23■□□□□ 0.51
KDM4B-212ENST00000624683 NPHP1O15259 732 aa18.23■□□□□ 0.51
KDM4B-212ENST00000624683 IPO9Q96P70 1041 aaKnown RBP18.23■□□□□ 0.51
KDM4B-212ENST00000624683 WASHC2AQ641Q2 1341 aa18.23■□□□□ 0.51
KDM4B-212ENST00000624683 PLIN1O60240 522 aa18.22■□□□□ 0.51
KDM4B-212ENST00000624683 APAF1O14727 1248 aa18.22■□□□□ 0.51
KDM4B-212ENST00000624683 PTMSP20962 102 aa18.22■□□□□ 0.51
KDM4B-212ENST00000624683 NAP1L2Q9ULW6 460 aaPredicted RBP18.22■□□□□ 0.51
KDM4B-212ENST00000624683 DNMBPQ6XZF7 1577 aa18.21■□□□□ 0.51
KDM4B-212ENST00000624683 PRG4Q92954 1404 aaPredicted RBP18.21■□□□□ 0.51
KDM4B-212ENST00000624683 EXOC6Q8TAG9 804 aa18.21■□□□□ 0.51
KDM4B-212ENST00000624683 GOLGA6L6A8MZA4 724 aa18.21■□□□□ 0.51
KDM4B-212ENST00000624683 HMMRO75330 724 aa18.2■□□□□ 0.5
KDM4B-212ENST00000624683 ARHGAP5Q13017 1502 aa18.2■□□□□ 0.5
KDM4B-212ENST00000624683 NRDCO43847 1150 aa18.2■□□□□ 0.5
KDM4B-212ENST00000624683 KIAA1211Q6ZU35 1233 aa18.2■□□□□ 0.5
KDM4B-212ENST00000624683 COG3Q96JB2 828 aa18.2■□□□□ 0.5
KDM4B-212ENST00000624683 MFAP1P55081 439 aaKnown RBP18.19■□□□□ 0.5
KDM4B-212ENST00000624683 CENPQQ7L2Z9 268 aaPredicted RBP18.19■□□□□ 0.5
KDM4B-212ENST00000624683 SLKQ9H2G2 1235 aaPredicted RBP18.19■□□□□ 0.5
KDM4B-212ENST00000624683 PLCB2Q00722 1185 aa18.19■□□□□ 0.5
KDM4B-212ENST00000624683 HFM1A2PYH4 1435 aa18.19■□□□□ 0.5
KDM4B-212ENST00000624683 AFAP1Q8N556 730 aa18.18■□□□□ 0.5
KDM4B-212ENST00000624683 TAOK2Q9UL54 1235 aa18.18■□□□□ 0.5
KDM4B-212ENST00000624683 BICRAQ9NZM4 1560 aa18.18■□□□□ 0.5
KDM4B-212ENST00000624683 SLC4A10Q6U841 1118 aa18.18■□□□□ 0.5
KDM4B-212ENST00000624683 NGEFQ8N5V2 710 aa18.18■□□□□ 0.5
KDM4B-212ENST00000624683 BCL2L13Q9BXK5 485 aa18.18■□□□□ 0.5
KDM4B-212ENST00000624683 CRBNQ96SW2 442 aa18.17■□□□□ 0.5
KDM4B-212ENST00000624683 GOLGA6L4A6NEF3 574 aa18.17■□□□□ 0.5
KDM4B-212ENST00000624683 LTV1Q96GA3 475 aaPredicted RBP18.17■□□□□ 0.5
KDM4B-212ENST00000624683 TROQ12816 1431 aaPredicted RBP18.17■□□□□ 0.5
KDM4B-212ENST00000624683 MSNP26038 577 aaKnown RBP18.15■□□□□ 0.5
KDM4B-212ENST00000624683 ZKSCAN2Q63HK3 967 aa18.15■□□□□ 0.5
KDM4B-212ENST00000624683 GBP4Q96PP9 640 aa18.15■□□□□ 0.5
KDM4B-212ENST00000624683 HECW1Q76N89 1606 aa18.15■□□□□ 0.5
KDM4B-212ENST00000624683 HDAC5Q9UQL6 1122 aa18.15■□□□□ 0.5
KDM4B-212ENST00000624683 C9orf84Q5VXU9 1444 aa18.14■□□□□ 0.49
KDM4B-212ENST00000624683 SNAPC4Q5SXM2 1469 aa18.14■□□□□ 0.49
KDM4B-212ENST00000624683 ELL2O00472 640 aaPredicted RBP18.13■□□□□ 0.49
KDM4B-212ENST00000624683 CHAF1AQ13111 956 aaPredicted RBP18.13■□□□□ 0.49
KDM4B-212ENST00000624683 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
KDM4B-212ENST00000624683 KIAA1107Q9UPP5 1409 aa18.12■□□□□ 0.49
KDM4B-212ENST00000624683 FAM69CQ0P6D2 419 aa18.12■□□□□ 0.49
KDM4B-212ENST00000624683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.12■□□□□ 0.499e-7■■■■■ 39.6
KDM4B-212ENST00000624683 DIAPH1O60610 1272 aaKnown RBP18.12■□□□□ 0.49
KDM4B-212ENST00000624683 PDE4AP27815 886 aa18.12■□□□□ 0.49
KDM4B-212ENST00000624683 COG6Q9Y2V7 657 aa18.12■□□□□ 0.49
KDM4B-212ENST00000624683 ZNF330Q9Y3S2 320 aaPredicted RBP18.11■□□□□ 0.49
KDM4B-212ENST00000624683 BRD4O60885 1362 aaPredicted RBP18.11■□□□□ 0.49
KDM4B-212ENST00000624683 FAM161AQ3B820 660 aa18.1■□□□□ 0.49
KDM4B-212ENST00000624683 NBPF8Q3BBV2 869 aa18.1■□□□□ 0.49
KDM4B-212ENST00000624683 TRIM6-TRIM34B2RNG4 842 aa18.09■□□□□ 0.49
KDM4B-212ENST00000624683 RUNDC1Q96C34 613 aa18.09■□□□□ 0.49
KDM4B-212ENST00000624683 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.08■□□□□ 0.49
KDM4B-212ENST00000624683 SUPT6HQ7KZ85 1726 aaKnown RBP18.08■□□□□ 0.48
KDM4B-212ENST00000624683 DAPK1P53355 1430 aa18.08■□□□□ 0.48
KDM4B-212ENST00000624683 GPATCH3Q96I76 525 aa18.07■□□□□ 0.48
KDM4B-212ENST00000624683 CFAP70Q5T0N1 1121 aa18.07■□□□□ 0.48
KDM4B-212ENST00000624683 TMEM132EQ6IEE7 984 aa18.07■□□□□ 0.48
KDM4B-212ENST00000624683 PLEKHH2Q8IVE3 1493 aa18.07■□□□□ 0.48
KDM4B-212ENST00000624683 RIPK4P57078 832 aa18.06■□□□□ 0.48
KDM4B-212ENST00000624683 KIAA0586Q9BVV6 1533 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms