RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 DHX57Q6P158 1386 aaKnown RBP7.16□□□□□ -1.26
ERCC6-213ENST00000624341 RALBP1Q15311 655 aa7.15□□□□□ -1.26
ERCC6-213ENST00000624341 KDM6BO15054 1643 aa7.15□□□□□ -1.26
ERCC6-213ENST00000624341 ABCC2Q92887 1545 aa7.15□□□□□ -1.26
ERCC6-213ENST00000624341 UGGT2Q9NYU1 1516 aa7.15□□□□□ -1.26
ERCC6-213ENST00000624341 ARHGAP35Q9NRY4 1499 aa7.15□□□□□ -1.27
ERCC6-213ENST00000624341 CTTNBP2Q8WZ74 1663 aa7.15□□□□□ -1.27
ERCC6-213ENST00000624341 KCNJ4P48050 445 aa7.15□□□□□ -1.27
ERCC6-213ENST00000624341 GOLGA6L3A6NEY3 463 aa7.14□□□□□ -1.27
ERCC6-213ENST00000624341 AMER1Q5JTC6 1135 aaPredicted RBP7.14□□□□□ -1.27
ERCC6-213ENST00000624341 PDE4AP27815 886 aa7.14□□□□□ -1.27
ERCC6-213ENST00000624341 MFAP1P55081 439 aaKnown RBP7.14□□□□□ -1.27
ERCC6-213ENST00000624341 SAFB2Q14151 953 aaKnown RBP eCLIP7.14□□□□□ -1.27
ERCC6-213ENST00000624341 GBP4Q96PP9 640 aa7.14□□□□□ -1.27
ERCC6-213ENST00000624341 GOLGA6L4A6NEF3 574 aa7.14□□□□□ -1.27
ERCC6-213ENST00000624341 FGD1P98174 961 aa7.14□□□□□ -1.27
ERCC6-213ENST00000624341 OS9Q13438 667 aaPredicted RBP7.14□□□□□ -1.27
ERCC6-213ENST00000624341 CLUAP1Q96AJ1 413 aa7.14□□□□□ -1.27
ERCC6-213ENST00000624341 CHAF1AQ13111 956 aaPredicted RBP7.14□□□□□ -1.27
ERCC6-213ENST00000624341 RWDD1Q9H446 243 aaPredicted RBP7.14□□□□□ -1.27
ERCC6-213ENST00000624341 TEX14Q8IWB6 1497 aa7.13□□□□□ -1.27
ERCC6-213ENST00000624341 FANCIQ9NVI1 1328 aa7.13□□□□□ -1.27
ERCC6-213ENST00000624341 UACAQ9BZF9 1416 aa7.13□□□□□ -1.27
ERCC6-213ENST00000624341 PLIN1O60240 522 aa7.13□□□□□ -1.27
ERCC6-213ENST00000624341 ITPRIPQ8IWB1 547 aa7.13□□□□□ -1.27
ERCC6-213ENST00000624341 EXOC6Q8TAG9 804 aa7.13□□□□□ -1.27
ERCC6-213ENST00000624341 NAP1L2Q9ULW6 460 aaPredicted RBP7.13□□□□□ -1.27
ERCC6-213ENST00000624341 U2AF1L5P0DN76 240 aaPredicted RBP7.12□□□□□ -1.27
ERCC6-213ENST00000624341 U2AF1Q01081 240 aaKnown RBP eCLIP7.12□□□□□ -1.27
ERCC6-213ENST00000624341 GOLGA2Q08379 1002 aa7.12□□□□□ -1.27
ERCC6-213ENST00000624341 CCDC146Q8IYE0 955 aa7.12□□□□□ -1.27
ERCC6-213ENST00000624341 FOXD4L1Q9NU39 408 aa7.12□□□□□ -1.27
ERCC6-213ENST00000624341 SOX12O15370 315 aa7.12□□□□□ -1.27
ERCC6-213ENST00000624341 NLRP13Q86W25 1043 aa7.12□□□□□ -1.27
ERCC6-213ENST00000624341 PRKRIP1Q9H875 184 aaPredicted RBP7.12□□□□□ -1.27
ERCC6-213ENST00000624341 KIAA0556O60303 1618 aa7.12□□□□□ -1.27
ERCC6-213ENST00000624341 DRC7Q8IY82 874 aa7.12□□□□□ -1.27
ERCC6-213ENST00000624341 USP35Q9P2H5 1018 aa7.12□□□□□ -1.27
ERCC6-213ENST00000624341 ROCK2O75116 1388 aaKnown RBP7.11□□□□□ -1.27
ERCC6-213ENST00000624341 SRPK2P78362 688 aaKnown RBP7.11□□□□□ -1.27
ERCC6-213ENST00000624341 GSE1Q14687 1217 aa7.11□□□□□ -1.27
ERCC6-213ENST00000624341 IPO8O15397 1037 aaKnown RBP7.11□□□□□ -1.27
ERCC6-213ENST00000624341 MCCP23508 829 aa7.1□□□□□ -1.27
ERCC6-213ENST00000624341 PDE3BQ13370 1112 aa7.1□□□□□ -1.27
ERCC6-213ENST00000624341 GOLGA6L6A8MZA4 724 aa7.1□□□□□ -1.27
ERCC6-213ENST00000624341 TSPOAP1O95153 1857 aa7.1□□□□□ -1.27
ERCC6-213ENST00000624341 ASXL2Q76L83 1435 aa7.1□□□□□ -1.27
ERCC6-213ENST00000624341 NRDCO43847 1150 aa7.1□□□□□ -1.27
ERCC6-213ENST00000624341 PMFBP1Q8TBY8 1022 aa7.1□□□□□ -1.27
ERCC6-213ENST00000624341 NUP155O75694 1391 aa7.1□□□□□ -1.27
ERCC6-213ENST00000624341 EFCAB5A4FU69 1503 aa7.1□□□□□ -1.27
ERCC6-213ENST00000624341 ZCCHC11Q5TAX3 1644 aaKnown RBP7.1□□□□□ -1.27
ERCC6-213ENST00000624341 KIAA2012Q0VF49 1180 aa7.09□□□□□ -1.27
ERCC6-213ENST00000624341 FMN1Q68DA7 1419 aa7.09□□□□□ -1.27
ERCC6-213ENST00000624341 MAP3K4Q9Y6R4 1608 aa7.09□□□□□ -1.27
ERCC6-213ENST00000624341 DISP1Q96F81 1524 aa7.09□□□□□ -1.27
ERCC6-213ENST00000624341 KDM5BQ9UGL1 1544 aa7.09□□□□□ -1.27
ERCC6-213ENST00000624341 ZBED9Q6R2W3 1325 aa7.09□□□□□ -1.27
ERCC6-213ENST00000624341 LMOD2Q6P5Q4 547 aa7.08□□□□□ -1.28
ERCC6-213ENST00000624341 SMC4Q9NTJ3 1288 aa7.08□□□□□ -1.28
ERCC6-213ENST00000624341 RRP1P56182 461 aaKnown RBP7.08□□□□□ -1.28
ERCC6-213ENST00000624341 ST20-MTHFSA0A0A6YYL1 179 aa7.08□□□□□ -1.28
ERCC6-213ENST00000624341 FAM161AQ3B820 660 aa7.08□□□□□ -1.28
ERCC6-213ENST00000624341 CRBNQ96SW2 442 aa7.08□□□□□ -1.28
ERCC6-213ENST00000624341 STK26Q9P289 416 aa7.08□□□□□ -1.28
ERCC6-213ENST00000624341 CALD1Q05682 793 aaKnown RBP7.08□□□□□ -1.28
ERCC6-213ENST00000624341 HSP90AA2PQ14568 343 aaPredicted RBP7.08□□□□□ -1.28
ERCC6-213ENST00000624341 CENPJQ9HC77 1338 aaPredicted RBP7.08□□□□□ -1.28
ERCC6-213ENST00000624341 CFAP43Q8NDM7 1665 aa7.07□□□□□ -1.28
ERCC6-213ENST00000624341 PTMSP20962 102 aa7.07□□□□□ -1.28
ERCC6-213ENST00000624341 EPRSP07814 1512 aaKnown RBP7.07□□□□□ -1.28
ERCC6-213ENST00000624341 TULP1O00294 542 aaPredicted RBP7.07□□□□□ -1.28
ERCC6-213ENST00000624341 BCL2L13Q9BXK5 485 aa7.07□□□□□ -1.28
ERCC6-213ENST00000624341 CENPQQ7L2Z9 268 aaPredicted RBP7.06□□□□□ -1.28
ERCC6-213ENST00000624341 VSIG10Q8N0Z9 540 aa7.06□□□□□ -1.28
ERCC6-213ENST00000624341 CFAP44Q96MT7 982 aa7.06□□□□□ -1.28
ERCC6-213ENST00000624341 RSPH6AQ9H0K4 717 aa7.06□□□□□ -1.28
ERCC6-213ENST00000624341 WDR7Q9Y4E6 1490 aa7.06□□□□□ -1.28
ERCC6-213ENST00000624341 NOL8Q76FK4 1167 aaKnown RBP7.06□□□□□ -1.28
ERCC6-213ENST00000624341 RRP7AQ9Y3A4 280 aaKnown RBP7.06□□□□□ -1.28
ERCC6-213ENST00000624341 SAMD9Q5K651 1589 aa7.06□□□□□ -1.28
ERCC6-213ENST00000624341 MYBBP1AQ9BQG0 1328 aaKnown RBP7.06□□□□□ -1.28
ERCC6-213ENST00000624341 FOXD4L5Q5VV16 416 aaPredicted RBP7.06□□□□□ -1.28
ERCC6-213ENST00000624341 KIAA1211Q6ZU35 1233 aa7.06□□□□□ -1.28
ERCC6-213ENST00000624341 FOXD4L4Q8WXT5 416 aaPredicted RBP7.06□□□□□ -1.28
ERCC6-213ENST00000624341 PPRC1Q5VV67 1664 aaKnown RBP7.05□□□□□ -1.28
ERCC6-213ENST00000624341 PANK3Q9H999 370 aa7.05□□□□□ -1.28
ERCC6-213ENST00000624341 ABCA8O94911 1581 aa7.05□□□□□ -1.28
ERCC6-213ENST00000624341 GGT6Q6P531 493 aa7.05□□□□□ -1.28
ERCC6-213ENST00000624341 KIF15Q9NS87 1388 aa7.04□□□□□ -1.28
ERCC6-213ENST00000624341 HAP1P54257 671 aaPredicted RBP7.04□□□□□ -1.28
ERCC6-213ENST00000624341 SYAP1Q96A49 352 aaPredicted RBP7.04□□□□□ -1.28
ERCC6-213ENST00000624341 COG6Q9Y2V7 657 aa7.04□□□□□ -1.28
ERCC6-213ENST00000624341 PHLDB1Q86UU1 1377 aa7.04□□□□□ -1.28
ERCC6-213ENST00000624341 RTF1Q92541 710 aaKnown RBP7.04□□□□□ -1.28
ERCC6-213ENST00000624341 FHOD3Q2V2M9 1422 aa7.04□□□□□ -1.28
ERCC6-213ENST00000624341 KANK1Q14678 1352 aa7.04□□□□□ -1.28
ERCC6-213ENST00000624341 DDX49Q9Y6V7 483 aaKnown RBP7.03□□□□□ -1.28
ERCC6-213ENST00000624341 MAGI3Q5TCQ9 1506 aa7.03□□□□□ -1.28
ERCC6-213ENST00000624341 ANKRD30AQ9BXX3 1397 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms