RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 RIMBP3CA6NJZ7 1639 aa18.17■□□□□ 0.5
PCDHB17P-202ENST00000623466 RIMBP3BA6NNM3 1639 aa18.17■□□□□ 0.5
PCDHB17P-202ENST00000623466 RIMBP3Q9UFD9 1639 aa18.17■□□□□ 0.5
PCDHB17P-202ENST00000623466 SYCP2Q9BX26 1530 aa18.16■□□□□ 0.5
PCDHB17P-202ENST00000623466 ERICH6BQ5W0A0 696 aa18.15■□□□□ 0.5
PCDHB17P-202ENST00000623466 SAMD9LQ8IVG5 1584 aa18.15■□□□□ 0.5
PCDHB17P-202ENST00000623466 CDC42BPBQ9Y5S2 1711 aa18.15■□□□□ 0.5
PCDHB17P-202ENST00000623466 SPATA31E1Q6ZUB1 1445 aa18.15■□□□□ 0.5
PCDHB17P-202ENST00000623466 TTC37Q6PGP7 1564 aa18.14■□□□□ 0.49
PCDHB17P-202ENST00000623466 EFCAB2Q5VUJ9 269 aa18.14■□□□□ 0.49
PCDHB17P-202ENST00000623466 CCDC141Q6ZP82 1450 aa18.14■□□□□ 0.49
PCDHB17P-202ENST00000623466 PLEKHH2Q8IVE3 1493 aa18.13■□□□□ 0.49
PCDHB17P-202ENST00000623466 PREX2Q70Z35 1606 aa18.13■□□□□ 0.49
PCDHB17P-202ENST00000623466 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.13■□□□□ 0.49
PCDHB17P-202ENST00000623466 ZBED9Q6R2W3 1325 aa18.13■□□□□ 0.49
PCDHB17P-202ENST00000623466 ABCC2Q92887 1545 aa18.13■□□□□ 0.49
PCDHB17P-202ENST00000623466 NBR1Q14596 966 aa18.12■□□□□ 0.49
PCDHB17P-202ENST00000623466 SHANK2Q9UPX8 1470 aa18.12■□□□□ 0.49
PCDHB17P-202ENST00000623466 ARHGEF12Q9NZN5 1544 aa18.11■□□□□ 0.49
PCDHB17P-202ENST00000623466 RSPH4AQ5TD94 716 aa18.1■□□□□ 0.49
PCDHB17P-202ENST00000623466 UHRF1BP1LA0JNW5 1464 aa18.1■□□□□ 0.49
PCDHB17P-202ENST00000623466 ARHGEF5Q12774 1597 aa18.1■□□□□ 0.49
PCDHB17P-202ENST00000623466 CYB5RLQ6IPT4 315 aa18.09■□□□□ 0.49
PCDHB17P-202ENST00000623466 IL27Q8NEV9 243 aa18.08■□□□□ 0.49
PCDHB17P-202ENST00000623466 TRAPPC8Q9Y2L5 1435 aa18.08■□□□□ 0.48
PCDHB17P-202ENST00000623466 ROCK2O75116 1388 aaKnown RBP18.06■□□□□ 0.48
PCDHB17P-202ENST00000623466 PAK3O75914 559 aaPredicted RBP18.06■□□□□ 0.48
PCDHB17P-202ENST00000623466 SPAG9O60271 1321 aaKnown RBP18.05■□□□□ 0.48
PCDHB17P-202ENST00000623466 CCDC144AA2RUR9 1427 aa18.04■□□□□ 0.48
PCDHB17P-202ENST00000623466 EIF5BO60841 1220 aaKnown RBP18.04■□□□□ 0.48
PCDHB17P-202ENST00000623466 FAM135AQ9P2D6 1515 aa18.04■□□□□ 0.48
PCDHB17P-202ENST00000623466 KDM5DQ9BY66 1539 aa18.02■□□□□ 0.47
PCDHB17P-202ENST00000623466 SENP3Q9H4L4 574 aaPredicted RBP18.01■□□□□ 0.47
PCDHB17P-202ENST00000623466 PLCH2O75038 1416 aa18.01■□□□□ 0.47
PCDHB17P-202ENST00000623466 PLA2R1Q13018 1463 aa18.01■□□□□ 0.47
PCDHB17P-202ENST00000623466 BCORL1Q5H9F3 1711 aa18.01■□□□□ 0.47
PCDHB17P-202ENST00000623466 MYO5CQ9NQX4 1742 aa18.01■□□□□ 0.47
PCDHB17P-202ENST00000623466 KIF3BO15066 747 aa18.01■□□□□ 0.47
PCDHB17P-202ENST00000623466 NOP58Q9Y2X3 529 aaKnown RBP18■□□□□ 0.47
PCDHB17P-202ENST00000623466 ZCCHC11Q5TAX3 1644 aaKnown RBP18■□□□□ 0.47
PCDHB17P-202ENST00000623466 NPM1P06748 294 aaKnown RBP eCLIP18■□□□□ 0.47
PCDHB17P-202ENST00000623466 DNAJC5Q9H3Z4 198 aa17.99■□□□□ 0.47
PCDHB17P-202ENST00000623466 DHX29Q7Z478 1369 aaKnown RBP17.98■□□□□ 0.47
PCDHB17P-202ENST00000623466 POLR1AO95602 1720 aaPredicted RBP17.98■□□□□ 0.47
PCDHB17P-202ENST00000623466 MAST1Q9Y2H9 1570 aa17.97■□□□□ 0.47
PCDHB17P-202ENST00000623466 TMC1Q8TDI8 760 aa17.97■□□□□ 0.47
PCDHB17P-202ENST00000623466 NUDCQ9Y266 331 aa17.96■□□□□ 0.47
PCDHB17P-202ENST00000623466 CC2D1BQ5T0F9 858 aaKnown RBP17.95■□□□□ 0.46
PCDHB17P-202ENST00000623466 SCAPERQ9BY12 1400 aa17.95■□□□□ 0.46
PCDHB17P-202ENST00000623466 PKNOX2Q96KN3 472 aa17.93■□□□□ 0.46
PCDHB17P-202ENST00000623466 UHRF1BP1Q6BDS2 1440 aa17.92■□□□□ 0.46
PCDHB17P-202ENST00000623466 SMG6Q86US8 1419 aaKnown RBP17.92■□□□□ 0.46
PCDHB17P-202ENST00000623466 RALGAPBQ86X10 1494 aa17.91■□□□□ 0.46
PCDHB17P-202ENST00000623466 CHGAP10645 457 aaKnown RBP17.91■□□□□ 0.46
PCDHB17P-202ENST00000623466 PLXNC1O60486 1568 aa17.9■□□□□ 0.46
PCDHB17P-202ENST00000623466 KDM5CP41229 1560 aa17.9■□□□□ 0.46
PCDHB17P-202ENST00000623466 A2MP01023 1474 aa17.9■□□□□ 0.46
PCDHB17P-202ENST00000623466 UNC13BO14795 1591 aa17.89■□□□□ 0.46
PCDHB17P-202ENST00000623466 ASXL2Q76L83 1435 aa17.89■□□□□ 0.45
PCDHB17P-202ENST00000623466 PRAG1Q86YV5 1406 aa17.89■□□□□ 0.45
PCDHB17P-202ENST00000623466 GGT6Q6P531 493 aa17.89■□□□□ 0.45
PCDHB17P-202ENST00000623466 WDR7Q9Y4E6 1490 aa17.88■□□□□ 0.45
PCDHB17P-202ENST00000623466 ANP32AP39687 249 aaKnown RBP17.87■□□□□ 0.45
PCDHB17P-202ENST00000623466 PNISRQ8TF01 805 aaKnown RBP17.87■□□□□ 0.45
PCDHB17P-202ENST00000623466 PANK3Q9H999 370 aa17.87■□□□□ 0.45
PCDHB17P-202ENST00000623466 DISP3Q9P2K9 1392 aa17.86■□□□□ 0.45
PCDHB17P-202ENST00000623466 FANCAO15360 1455 aa17.86■□□□□ 0.45
PCDHB17P-202ENST00000623466 RTL5Q5HYW3 569 aaPredicted RBP17.86■□□□□ 0.45
PCDHB17P-202ENST00000623466 TESK2Q96S53 571 aa17.86■□□□□ 0.45
PCDHB17P-202ENST00000623466 NPM2Q86SE8 214 aaKnown RBP17.85■□□□□ 0.45
PCDHB17P-202ENST00000623466 IPO9Q96P70 1041 aaKnown RBP17.85■□□□□ 0.45
PCDHB17P-202ENST00000623466 RNF123Q5XPI4 1314 aa17.85■□□□□ 0.45
PCDHB17P-202ENST00000623466 DUOX2Q9NRD8 1548 aa17.84■□□□□ 0.45
PCDHB17P-202ENST00000623466 NUTM2DQ5VT03 806 aaPredicted RBP17.84■□□□□ 0.45
PCDHB17P-202ENST00000623466 RAPGEF3O95398 923 aa17.84■□□□□ 0.45
PCDHB17P-202ENST00000623466 ZBTB47Q9UFB7 747 aaPredicted RBP17.83■□□□□ 0.44
PCDHB17P-202ENST00000623466 ABCC1P33527 1531 aa17.83■□□□□ 0.44
PCDHB17P-202ENST00000623466 IQGAP3Q86VI3 1631 aa17.82■□□□□ 0.44
PCDHB17P-202ENST00000623466 CFAP70Q5T0N1 1121 aa17.81■□□□□ 0.44
PCDHB17P-202ENST00000623466 ADGRL1O94910 1474 aa17.8■□□□□ 0.44
PCDHB17P-202ENST00000623466 EXOC6Q8TAG9 804 aa17.8■□□□□ 0.44
PCDHB17P-202ENST00000623466 ERBINQ96RT1 1412 aa17.8■□□□□ 0.44
PCDHB17P-202ENST00000623466 PER1O15534 1290 aaPredicted RBP17.8■□□□□ 0.44
PCDHB17P-202ENST00000623466 PLEKHG5O94827 1062 aa17.79■□□□□ 0.44
PCDHB17P-202ENST00000623466 ARID4BQ4LE39 1312 aaPredicted RBP17.79■□□□□ 0.44
PCDHB17P-202ENST00000623466 MAGI2Q86UL8 1455 aa17.79■□□□□ 0.44
PCDHB17P-202ENST00000623466 TMF1P82094 1093 aa17.78■□□□□ 0.44
PCDHB17P-202ENST00000623466 ARAP3Q8WWN8 1544 aa17.78■□□□□ 0.44
PCDHB17P-202ENST00000623466 ADGRF5Q8IZF2 1346 aa17.76■□□□□ 0.43
PCDHB17P-202ENST00000623466 MYBBP1AQ9BQG0 1328 aaKnown RBP17.76■□□□□ 0.43
PCDHB17P-202ENST00000623466 UGGT1Q9NYU2 1555 aa17.75■□□□□ 0.43
PCDHB17P-202ENST00000623466 ABCA9Q8IUA7 1624 aa17.74■□□□□ 0.43
PCDHB17P-202ENST00000623466 RRP1P56182 461 aaKnown RBP17.74■□□□□ 0.43
PCDHB17P-202ENST00000623466 KANK1Q14678 1352 aa17.74■□□□□ 0.43
PCDHB17P-202ENST00000623466 RALBP1Q15311 655 aa17.73■□□□□ 0.43
PCDHB17P-202ENST00000623466 SKAP1Q86WV1 359 aa17.73■□□□□ 0.43
PCDHB17P-202ENST00000623466 ATP10AO60312 1499 aa17.73■□□□□ 0.43
PCDHB17P-202ENST00000623466 LAS1LQ9Y4W2 734 aaKnown RBP17.73■□□□□ 0.43
PCDHB17P-202ENST00000623466 KTN1Q86UP2 1357 aaKnown RBP17.72■□□□□ 0.43
PCDHB17P-202ENST00000623466 CFAP65Q6ZU64 1925 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms