RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 SRCAPQ6ZRS2 3230 aa9.09□□□□□ -0.95
EBF1-211ENST00000622875 FAM135AQ9P2D6 1515 aa9.09□□□□□ -0.95
EBF1-211ENST00000622875 PLXNC1O60486 1568 aa9.08□□□□□ -0.96
EBF1-211ENST00000622875 SAMD9Q5K651 1589 aa9.08□□□□□ -0.96
EBF1-211ENST00000622875 BCL9LQ86UU0 1499 aa9.08□□□□□ -0.96
EBF1-211ENST00000622875 YY1P25490 414 aa9.08□□□□□ -0.96
EBF1-211ENST00000622875 AHDC1Q5TGY3 1603 aaPredicted RBP9.07□□□□□ -0.96
EBF1-211ENST00000622875 ABCC1P33527 1531 aa9.07□□□□□ -0.96
EBF1-211ENST00000622875 NUP153P49790 1475 aaKnown RBP9.07□□□□□ -0.96
EBF1-211ENST00000622875 MAP3K1Q13233 1512 aa9.06□□□□□ -0.96
EBF1-211ENST00000622875 DIP2AQ14689 1571 aa9.06□□□□□ -0.96
EBF1-211ENST00000622875 ESF1Q9H501 851 aaKnown RBP9.06□□□□□ -0.96
EBF1-211ENST00000622875 ABCC3O15438 1527 aa9.05□□□□□ -0.96
EBF1-211ENST00000622875 SPHKAPQ2M3C7 1700 aa9.03□□□□□ -0.96
EBF1-211ENST00000622875 NLRP1Q9C000 1473 aa9.02□□□□□ -0.97
EBF1-211ENST00000622875 UNC13BO14795 1591 aa9.02□□□□□ -0.97
EBF1-211ENST00000622875 TIAM1Q13009 1591 aa9.02□□□□□ -0.97
EBF1-211ENST00000622875 SENP3-EIF4A1A0A087X0R7 540 aa9.01□□□□□ -0.97
EBF1-211ENST00000622875 ANKLE2Q86XL3 938 aa9□□□□□ -0.97
EBF1-211ENST00000622875 RBM6P78332 1123 aaKnown RBP8.99□□□□□ -0.97
EBF1-211ENST00000622875 KDM5AP29375 1690 aaKnown RBP8.99□□□□□ -0.97
EBF1-211ENST00000622875 UGGT1Q9NYU2 1555 aa8.98□□□□□ -0.97
EBF1-211ENST00000622875 CDC42BPBQ9Y5S2 1711 aa8.97□□□□□ -0.97
EBF1-211ENST00000622875 PZPP20742 1482 aa8.96□□□□□ -0.97
EBF1-211ENST00000622875 SENP3Q9H4L4 574 aaPredicted RBP8.96□□□□□ -0.97
EBF1-211ENST00000622875 ADGBQ8N7X0 1667 aa8.96□□□□□ -0.97
EBF1-211ENST00000622875 C1QTNF8P60827 252 aa8.96□□□□□ -0.98
EBF1-211ENST00000622875 ARHGAP23Q9P227 1491 aa8.95□□□□□ -0.98
EBF1-211ENST00000622875 FAM9AQ8IZU1 332 aaPredicted RBP8.95□□□□□ -0.98
EBF1-211ENST00000622875 NKTRP30414 1462 aaKnown RBP8.94□□□□□ -0.98
EBF1-211ENST00000622875 EFCAB2Q5VUJ9 269 aa8.94□□□□□ -0.98
EBF1-211ENST00000622875 BLMP54132 1417 aaPredicted RBP8.94□□□□□ -0.98
EBF1-211ENST00000622875 SCAF11Q99590 1463 aaKnown RBP8.94□□□□□ -0.98
EBF1-211ENST00000622875 INO80Q9ULG1 1556 aaPredicted RBP8.94□□□□□ -0.98
EBF1-211ENST00000622875 TNRQ92752 1358 aa8.94□□□□□ -0.98
EBF1-211ENST00000622875 PREX2Q70Z35 1606 aa8.93□□□□□ -0.98
EBF1-211ENST00000622875 PRDM15P57071 1507 aaPredicted RBP8.93□□□□□ -0.98
EBF1-211ENST00000622875 UBR1Q8IWV7 1749 aa8.93□□□□□ -0.98
EBF1-211ENST00000622875 PLEKHD1A6NEE1 506 aa8.93□□□□□ -0.98
EBF1-211ENST00000622875 MEX3CQ5U5Q3 659 aaKnown RBP8.93□□□□□ -0.98
EBF1-211ENST00000622875 SAMD9LQ8IVG5 1584 aa8.92□□□□□ -0.98
EBF1-211ENST00000622875 RANGAP1P46060 587 aaPredicted RBP8.92□□□□□ -0.98
EBF1-211ENST00000622875 SLIT1O75093 1534 aa8.92□□□□□ -0.98
EBF1-211ENST00000622875 AFF2P51816 1311 aa8.92□□□□□ -0.98
EBF1-211ENST00000622875 APLP2Q06481 763 aa8.92□□□□□ -0.98
EBF1-211ENST00000622875 PRKCSHP14314 528 aaPredicted RBP8.91□□□□□ -0.98
EBF1-211ENST00000622875 THEMISQ8N1K5 641 aaPredicted RBP8.91□□□□□ -0.98
EBF1-211ENST00000622875 CHD4Q14839 1912 aa8.91□□□□□ -0.98
EBF1-211ENST00000622875 HRCP23327 699 aa8.91□□□□□ -0.98
EBF1-211ENST00000622875 NUTM2BA6NNL0 878 aaPredicted RBP8.91□□□□□ -0.98
EBF1-211ENST00000622875 NUTM2EB1AL46 878 aaPredicted RBP8.91□□□□□ -0.98
EBF1-211ENST00000622875 NUTM2DQ5VT03 806 aaPredicted RBP8.91□□□□□ -0.98
EBF1-211ENST00000622875 NUTM2AQ8IVF1 878 aaPredicted RBP8.91□□□□□ -0.98
EBF1-211ENST00000622875 MROH1Q8NDA8 1641 aa8.9□□□□□ -0.98
EBF1-211ENST00000622875 CAMSAP2Q08AD1 1489 aa8.9□□□□□ -0.98
EBF1-211ENST00000622875 RTEL1-TNFRSF6BF6WH68 1400 aa8.9□□□□□ -0.99
EBF1-211ENST00000622875 NGLY1Q96IV0 654 aa8.89□□□□□ -0.99
EBF1-211ENST00000622875 ARHGAP5Q13017 1502 aa8.89□□□□□ -0.99
EBF1-211ENST00000622875 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.89□□□□□ -0.99
EBF1-211ENST00000622875 AFAP1Q8N556 730 aa8.89□□□□□ -0.99
EBF1-211ENST00000622875 ATRNO75882 1429 aa8.88□□□□□ -0.99
EBF1-211ENST00000622875 TMEM94Q12767 1356 aa8.87□□□□□ -0.99
EBF1-211ENST00000622875 ZNF784Q8NCA9 323 aaPredicted RBP8.87□□□□□ -0.99
EBF1-211ENST00000622875 SETD5Q9C0A6 1442 aa8.87□□□□□ -0.99
EBF1-211ENST00000622875 NCOA3Q9Y6Q9 1424 aa8.87□□□□□ -0.99
EBF1-211ENST00000622875 A2MP01023 1474 aa8.86□□□□□ -0.99
EBF1-211ENST00000622875 MIA2Q96PC5 1412 aa8.86□□□□□ -0.99
EBF1-211ENST00000622875 QTRT2Q9H974 415 aaKnown RBP8.85□□□□□ -0.99
EBF1-211ENST00000622875 GPATCH8Q9UKJ3 1502 aaKnown RBP8.85□□□□□ -0.99
EBF1-211ENST00000622875 RALGAPBQ86X10 1494 aa8.85□□□□□ -0.99
EBF1-211ENST00000622875 LAMC1P11047 1609 aa8.85□□□□□ -0.99
EBF1-211ENST00000622875 NINLQ9Y2I6 1382 aa8.85□□□□□ -0.99
EBF1-211ENST00000622875 ARID3CA6NKF2 412 aa8.85□□□□□ -0.99
EBF1-211ENST00000622875 BRWD3Q6RI45 1802 aa8.84□□□□□ -0.99
EBF1-211ENST00000622875 MARF1Q9Y4F3 1742 aaKnown RBP8.84□□□□□ -0.99
EBF1-211ENST00000622875 TET3O43151 1660 aa8.84□□□□□ -0.99
EBF1-211ENST00000622875 DAXXQ9UER7 740 aaPredicted RBP8.83□□□□□ -1
EBF1-211ENST00000622875 RGPD1P0DJD0 1748 aa8.83□□□□□ -1
EBF1-211ENST00000622875 CAMTA1Q9Y6Y1 1673 aa8.83□□□□□ -1
EBF1-211ENST00000622875 CHD2O14647 1828 aaKnown RBP8.82□□□□□ -1
EBF1-211ENST00000622875 SLAIN2Q9P270 581 aa8.82□□□□□ -1
EBF1-211ENST00000622875 MSH6P52701 1360 aa8.81□□□□□ -1
EBF1-211ENST00000622875 COL22A1Q8NFW1 1626 aaPredicted RBP8.81□□□□□ -1
EBF1-211ENST00000622875 NCOA2Q15596 1464 aa8.81□□□□□ -1
EBF1-211ENST00000622875 MAST1Q9Y2H9 1570 aa8.81□□□□□ -1
EBF1-211ENST00000622875 PRXQ9BXM0 1461 aa8.8□□□□□ -1
EBF1-211ENST00000622875 CDC42BPAQ5VT25 1732 aa8.8□□□□□ -1
EBF1-211ENST00000622875 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.8□□□□□ -1
EBF1-211ENST00000622875 DISP2A7MBM2 1401 aa8.79□□□□□ -1
EBF1-211ENST00000622875 KCNA6P17658 529 aa8.79□□□□□ -1
EBF1-211ENST00000622875 EP400Q96L91 3159 aa8.79□□□□□ -1
EBF1-211ENST00000622875 PRELPP51888 382 aa8.78□□□□□ -1
EBF1-211ENST00000622875 PTCH1Q13635 1447 aa8.78□□□□□ -1
EBF1-211ENST00000622875 RREB1Q92766 1687 aa8.78□□□□□ -1
EBF1-211ENST00000622875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.78□□□□□ -1
EBF1-211ENST00000622875 HNRNPUL2Q1KMD3 747 aaKnown RBP8.78□□□□□ -1
EBF1-211ENST00000622875 TNS1Q9HBL0 1735 aaKnown RBP8.78□□□□□ -1
EBF1-211ENST00000622875 TRPC5Q9UL62 973 aaPredicted RBP8.77□□□□□ -1.01
EBF1-211ENST00000622875 DCAF8L1A6NGE4 600 aa8.76□□□□□ -1.01
EBF1-211ENST00000622875 ARHGAP35Q9NRY4 1499 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms