RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 FOXD4L1Q9NU39 408 aa20.42■□□□□ 0.86
GABRB3-215ENST00000622697 PAK3O75914 559 aaPredicted RBP20.41■□□□□ 0.86
GABRB3-215ENST00000622697 APAF1O14727 1248 aa20.41■□□□□ 0.86
GABRB3-215ENST00000622697 NUTM2FA1L443 756 aa20.4■□□□□ 0.86
GABRB3-215ENST00000622697 HDGFP51858 240 aaKnown RBP20.4■□□□□ 0.86
GABRB3-215ENST00000622697 COG6Q9Y2V7 657 aa20.38■□□□□ 0.85
GABRB3-215ENST00000622697 ELL2O00472 640 aaPredicted RBP20.38■□□□□ 0.85
GABRB3-215ENST00000622697 TERF2IPQ9NYB0 399 aa20.38■□□□□ 0.85
GABRB3-215ENST00000622697 RRBP1Q9P2E9 1410 aaKnown RBP20.38■□□□□ 0.85
GABRB3-215ENST00000622697 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.37■□□□□ 0.85
GABRB3-215ENST00000622697 NCOA2Q15596 1464 aa20.37■□□□□ 0.85
GABRB3-215ENST00000622697 PTPRGP23470 1445 aa20.36■□□□□ 0.85
GABRB3-215ENST00000622697 MCCP23508 829 aa20.36■□□□□ 0.85
GABRB3-215ENST00000622697 CENPQQ7L2Z9 268 aaPredicted RBP20.35■□□□□ 0.85
GABRB3-215ENST00000622697 CNTLNQ9NXG0 1405 aa20.35■□□□□ 0.85
GABRB3-215ENST00000622697 AQRO60306 1485 aaKnown RBP eCLIP20.34■□□□□ 0.85
GABRB3-215ENST00000622697 CALD1Q05682 793 aaKnown RBP20.34■□□□□ 0.85
GABRB3-215ENST00000622697 SLC4A10Q6U841 1118 aa20.34■□□□□ 0.85
GABRB3-215ENST00000622697 CASKIN1Q8WXD9 1431 aa20.33■□□□□ 0.84
GABRB3-215ENST00000622697 FAM161AQ3B820 660 aa20.32■□□□□ 0.84
GABRB3-215ENST00000622697 GBP4Q96PP9 640 aa20.32■□□□□ 0.84
GABRB3-215ENST00000622697 FANCIQ9NVI1 1328 aa20.32■□□□□ 0.84
GABRB3-215ENST00000622697 GOLGA6L4A6NEF3 574 aa20.31■□□□□ 0.84
GABRB3-215ENST00000622697 MSNP26038 577 aaKnown RBP20.31■□□□□ 0.84
GABRB3-215ENST00000622697 E9PSI1 815 aa20.3■□□□□ 0.84
GABRB3-215ENST00000622697 CUX1P39880 1505 aa20.3■□□□□ 0.84
GABRB3-215ENST00000622697 NOL8Q76FK4 1167 aaKnown RBP20.3■□□□□ 0.84
GABRB3-215ENST00000622697 CFTRP13569 1480 aa20.29■□□□□ 0.84
GABRB3-215ENST00000622697 NCAPD3P42695 1498 aa20.29■□□□□ 0.84
GABRB3-215ENST00000622697 TRHP20396 242 aaPredicted RBP20.29■□□□□ 0.84
GABRB3-215ENST00000622697 ERICH3Q5RHP9 1530 aa20.29■□□□□ 0.84
GABRB3-215ENST00000622697 CDCA7LQ96GN5 454 aa20.27■□□□□ 0.84
GABRB3-215ENST00000622697 NBPF8Q3BBV2 869 aa20.27■□□□□ 0.83
GABRB3-215ENST00000622697 TRIM6-TRIM34B2RNG4 842 aa20.26■□□□□ 0.83
GABRB3-215ENST00000622697 CCDC184Q52MB2 194 aa20.26■□□□□ 0.83
GABRB3-215ENST00000622697 KIAA1211Q6ZU35 1233 aa20.26■□□□□ 0.83
GABRB3-215ENST00000622697 MINK1Q8N4C8 1332 aaPredicted RBP20.26■□□□□ 0.83
GABRB3-215ENST00000622697 PRXQ9BXM0 1461 aa20.26■□□□□ 0.83
GABRB3-215ENST00000622697 GOLGA6L3A6NEY3 463 aa20.25■□□□□ 0.83
GABRB3-215ENST00000622697 LTV1Q96GA3 475 aaPredicted RBP20.25■□□□□ 0.83
GABRB3-215ENST00000622697 PRDM2Q13029 1718 aa20.25■□□□□ 0.83
GABRB3-215ENST00000622697 STK31Q9BXU1 1019 aa20.25■□□□□ 0.83
GABRB3-215ENST00000622697 ANKRD50Q9ULJ7 1429 aa20.24■□□□□ 0.83
GABRB3-215ENST00000622697 CGNL1Q0VF96 1302 aa20.24■□□□□ 0.83
GABRB3-215ENST00000622697 CFAP44Q96MT7 982 aa20.23■□□□□ 0.83
GABRB3-215ENST00000622697 FYCO1Q9BQS8 1478 aa20.23■□□□□ 0.83
GABRB3-215ENST00000622697 FOXD4L5Q5VV16 416 aaPredicted RBP20.23■□□□□ 0.83
GABRB3-215ENST00000622697 FOXD4L4Q8WXT5 416 aaPredicted RBP20.23■□□□□ 0.83
GABRB3-215ENST00000622697 ANKRD45Q5TZF3 282 aa20.23■□□□□ 0.83
GABRB3-215ENST00000622697 ZKSCAN2Q63HK3 967 aa20.22■□□□□ 0.83
GABRB3-215ENST00000622697 ADAMTS8Q9UP79 889 aa20.21■□□□□ 0.83
GABRB3-215ENST00000622697 NGDNQ8NEJ9 315 aaKnown RBP20.2■□□□□ 0.82
GABRB3-215ENST00000622697 ZNF330Q9Y3S2 320 aaPredicted RBP20.2■□□□□ 0.82
GABRB3-215ENST00000622697 ARID3AQ99856 593 aa20.2■□□□□ 0.82
GABRB3-215ENST00000622697 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
GABRB3-215ENST00000622697 DRC7Q8IY82 874 aa20.19■□□□□ 0.82
GABRB3-215ENST00000622697 EVC2Q86UK5 1308 aa20.19■□□□□ 0.82
GABRB3-215ENST00000622697 NBPF1Q3BBV0 1214 aa20.19■□□□□ 0.82
GABRB3-215ENST00000622697 AMPHP49418 695 aa20.18■□□□□ 0.82
GABRB3-215ENST00000622697 TULP1O00294 542 aaPredicted RBP20.18■□□□□ 0.82
GABRB3-215ENST00000622697 NESP48681 1621 aa20.17■□□□□ 0.82
GABRB3-215ENST00000622697 CDK11BP21127 795 aaKnown RBP20.17■□□□□ 0.82
GABRB3-215ENST00000622697 VGFO15240 615 aaPredicted RBP20.17■□□□□ 0.82
GABRB3-215ENST00000622697 HMMRO75330 724 aa20.16■□□□□ 0.82
GABRB3-215ENST00000622697 PANK1Q8TE04 598 aa20.16■□□□□ 0.82
GABRB3-215ENST00000622697 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
GABRB3-215ENST00000622697 GSE1Q14687 1217 aa20.16■□□□□ 0.82
GABRB3-215ENST00000622697 NPHP1O15259 732 aa20.15■□□□□ 0.82
GABRB3-215ENST00000622697 CSB-PGBD3P0DP91 1061 aa20.15■□□□□ 0.82
GABRB3-215ENST00000622697 AKNAQ7Z591 1439 aa20.15■□□□□ 0.82
GABRB3-215ENST00000622697 USP35Q9P2H5 1018 aa20.15■□□□□ 0.82
GABRB3-215ENST00000622697 LMOD3Q0VAK6 560 aa20.14■□□□□ 0.81
GABRB3-215ENST00000622697 TMEM132EQ6IEE7 984 aa20.14■□□□□ 0.81
GABRB3-215ENST00000622697 RIPK4P57078 832 aa20.13■□□□□ 0.81
GABRB3-215ENST00000622697 TIAM1Q13009 1591 aa20.12■□□□□ 0.81
GABRB3-215ENST00000622697 FOXD4L6Q3SYB3 417 aaPredicted RBP20.11■□□□□ 0.81
GABRB3-215ENST00000622697 FOXD4L3Q6VB84 417 aaPredicted RBP20.11■□□□□ 0.81
GABRB3-215ENST00000622697 DZIP1LQ8IYY4 767 aaKnown RBP20.11■□□□□ 0.81
GABRB3-215ENST00000622697 GOLGA6L6A8MZA4 724 aa20.11■□□□□ 0.81
GABRB3-215ENST00000622697 AFAP1Q8N556 730 aa20.1■□□□□ 0.81
GABRB3-215ENST00000622697 COG3Q96JB2 828 aa20.1■□□□□ 0.81
GABRB3-215ENST00000622697 CHMP3Q9Y3E7 222 aa20.1■□□□□ 0.81
GABRB3-215ENST00000622697 BRD4O60885 1362 aaPredicted RBP20.1■□□□□ 0.81
GABRB3-215ENST00000622697 PTMSP20962 102 aa20.1■□□□□ 0.81
GABRB3-215ENST00000622697 CHAF1AQ13111 956 aaPredicted RBP20.1■□□□□ 0.81
GABRB3-215ENST00000622697 RUNDC1Q96C34 613 aa20.1■□□□□ 0.81
GABRB3-215ENST00000622697 DIAPH1O60610 1272 aaKnown RBP20.09■□□□□ 0.81
GABRB3-215ENST00000622697 RILPL2Q969X0 211 aa20.09■□□□□ 0.81
GABRB3-215ENST00000622697 GGNBP2Q9H3C7 697 aa20.09■□□□□ 0.81
GABRB3-215ENST00000622697 CFAP70Q5T0N1 1121 aa20.09■□□□□ 0.81
GABRB3-215ENST00000622697 HFM1A2PYH4 1435 aa20.08■□□□□ 0.81
GABRB3-215ENST00000622697 MIA2Q96PC5 1412 aa20.08■□□□□ 0.8
GABRB3-215ENST00000622697 CABP2Q9NPB3 220 aa20.08■□□□□ 0.8
GABRB3-215ENST00000622697 NECTIN2Q92692 538 aa20.08■□□□□ 0.8
GABRB3-215ENST00000622697 HMOX1P09601 288 aa20.07■□□□□ 0.8
GABRB3-215ENST00000622697 EID1Q9Y6B2 187 aa20.07■□□□□ 0.8
GABRB3-215ENST00000622697 ST18O60284 1047 aa20.06■□□□□ 0.8
GABRB3-215ENST00000622697 PPP2R1AP30153 589 aa20.06■□□□□ 0.8
GABRB3-215ENST00000622697 DDX19BQ9UMR2 479 aa20.06■□□□□ 0.8
GABRB3-215ENST00000622697 PRG4Q92954 1404 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms