RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 FTSJ3Q8IY81 847 aaKnown RBP17.24■□□□□ 0.35
SIRPA-204ENST00000622179 ANKRD30BQ9BXX2 1392 aa17.23■□□□□ 0.35
SIRPA-204ENST00000622179 HSP90AA1P07900 732 aaKnown RBP17.21■□□□□ 0.35
SIRPA-204ENST00000622179 GRIN2AQ12879 1464 aa17.21■□□□□ 0.35
SIRPA-204ENST00000622179 ROCK1Q13464 1354 aa17.21■□□□□ 0.35
SIRPA-204ENST00000622179 ARHGAP5Q13017 1502 aa17.2■□□□□ 0.34
SIRPA-204ENST00000622179 EIF3AQ14152 1382 aaKnown RBP17.2■□□□□ 0.34
SIRPA-204ENST00000622179 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
SIRPA-204ENST00000622179 PDE3BQ13370 1112 aa17.2■□□□□ 0.34
SIRPA-204ENST00000622179 U2AF1L5P0DN76 240 aaPredicted RBP17.19■□□□□ 0.34
SIRPA-204ENST00000622179 U2AF1Q01081 240 aaKnown RBP eCLIP17.19■□□□□ 0.34
SIRPA-204ENST00000622179 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
SIRPA-204ENST00000622179 DDRGK1Q96HY6 314 aa17.19■□□□□ 0.34
SIRPA-204ENST00000622179 ARHGEF11O15085 1522 aa17.18■□□□□ 0.34
SIRPA-204ENST00000622179 THOC2Q8NI27 1593 aaKnown RBP17.18■□□□□ 0.34
SIRPA-204ENST00000622179 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
SIRPA-204ENST00000622179 ARXQ96QS3 562 aa17.16■□□□□ 0.34
SIRPA-204ENST00000622179 CAMSAP2Q08AD1 1489 aa17.15■□□□□ 0.34
SIRPA-204ENST00000622179 RRP1P56182 461 aaKnown RBP17.15■□□□□ 0.34
SIRPA-204ENST00000622179 NCOA1Q15788 1441 aa17.14■□□□□ 0.33
SIRPA-204ENST00000622179 RRP7AQ9Y3A4 280 aaKnown RBP17.14■□□□□ 0.33
SIRPA-204ENST00000622179 ZBTB7CA1YPR0 619 aa17.13■□□□□ 0.33
SIRPA-204ENST00000622179 SOX12O15370 315 aa17.13■□□□□ 0.33
SIRPA-204ENST00000622179 AKNAQ7Z591 1439 aa17.12■□□□□ 0.33
SIRPA-204ENST00000622179 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
SIRPA-204ENST00000622179 APAF1O14727 1248 aa17.11■□□□□ 0.33
SIRPA-204ENST00000622179 TCERG1O14776 1098 aaKnown RBP17.11■□□□□ 0.33
SIRPA-204ENST00000622179 MYH16Q9H6N6 1097 aa17.11■□□□□ 0.33
SIRPA-204ENST00000622179 CDCA7LQ96GN5 454 aa17.11■□□□□ 0.33
SIRPA-204ENST00000622179 UGGT2Q9NYU1 1516 aa17.1■□□□□ 0.33
SIRPA-204ENST00000622179 PNISRQ8TF01 805 aaKnown RBP17.1■□□□□ 0.33
SIRPA-204ENST00000622179 CFAP70Q5T0N1 1121 aa17.1■□□□□ 0.33
SIRPA-204ENST00000622179 OSCARQ8IYS5 282 aa17.1■□□□□ 0.33
SIRPA-204ENST00000622179 CTTNBP2Q8WZ74 1663 aa17.09■□□□□ 0.33
SIRPA-204ENST00000622179 CYB5RLQ6IPT4 315 aa17.09■□□□□ 0.33
SIRPA-204ENST00000622179 CLUAP1Q96AJ1 413 aa17.09■□□□□ 0.33
SIRPA-204ENST00000622179 CRBNQ96SW2 442 aa17.08■□□□□ 0.32
SIRPA-204ENST00000622179 BECN1Q14457 450 aa17.08■□□□□ 0.32
SIRPA-204ENST00000622179 HDGFL2Q7Z4V5 671 aaPredicted RBP17.08■□□□□ 0.32
SIRPA-204ENST00000622179 ADAMTS8Q9UP79 889 aa17.08■□□□□ 0.32
SIRPA-204ENST00000622179 RPRD2Q5VT52 1461 aaKnown RBP17.07■□□□□ 0.32
SIRPA-204ENST00000622179 TMEM132EQ6IEE7 984 aa17.07■□□□□ 0.32
SIRPA-204ENST00000622179 BRD4O60885 1362 aaPredicted RBP17.06■□□□□ 0.32
SIRPA-204ENST00000622179 CFAP43Q8NDM7 1665 aa17.06■□□□□ 0.32
SIRPA-204ENST00000622179 NUP153P49790 1475 aaKnown RBP17.05■□□□□ 0.32
SIRPA-204ENST00000622179 GPATCH8Q9UKJ3 1502 aaKnown RBP17.04■□□□□ 0.32
SIRPA-204ENST00000622179 BCL2L13Q9BXK5 485 aa17.04■□□□□ 0.32
SIRPA-204ENST00000622179 VGFO15240 615 aaPredicted RBP17.03■□□□□ 0.32
SIRPA-204ENST00000622179 IPO9Q96P70 1041 aaKnown RBP17.03■□□□□ 0.32
SIRPA-204ENST00000622179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.02■□□□□ 0.32
SIRPA-204ENST00000622179 CENPJQ9HC77 1338 aaPredicted RBP17.02■□□□□ 0.32
SIRPA-204ENST00000622179 SCAPERQ9BY12 1400 aa17.02■□□□□ 0.32
SIRPA-204ENST00000622179 PNNQ9H307 717 aaKnown RBP17.02■□□□□ 0.31
SIRPA-204ENST00000622179 TERF2IPQ9NYB0 399 aa17.01■□□□□ 0.31
SIRPA-204ENST00000622179 MINK1Q8N4C8 1332 aaPredicted RBP17.01■□□□□ 0.31
SIRPA-204ENST00000622179 CCDC141Q6ZP82 1450 aa17■□□□□ 0.31
SIRPA-204ENST00000622179 MS4A1P11836 297 aa17■□□□□ 0.31
SIRPA-204ENST00000622179 PDE4AP27815 886 aa16.99■□□□□ 0.31
SIRPA-204ENST00000622179 KIF21AQ7Z4S6 1674 aa16.99■□□□□ 0.31
SIRPA-204ENST00000622179 NUTM2FA1L443 756 aa16.99■□□□□ 0.31
SIRPA-204ENST00000622179 PPP2R1AP30153 589 aa16.98■□□□□ 0.31
SIRPA-204ENST00000622179 DEKP35659 375 aaKnown RBP16.98■□□□□ 0.31
SIRPA-204ENST00000622179 CGNL1Q0VF96 1302 aa16.98■□□□□ 0.31
SIRPA-204ENST00000622179 EVC2Q86UK5 1308 aa16.98■□□□□ 0.31
SIRPA-204ENST00000622179 STAC3Q96MF2 364 aa16.97■□□□□ 0.31
SIRPA-204ENST00000622179 HDGFP51858 240 aaKnown RBP16.97■□□□□ 0.31
SIRPA-204ENST00000622179 ITPRIPQ8IWB1 547 aa16.97■□□□□ 0.31
SIRPA-204ENST00000622179 SMC4Q9NTJ3 1288 aa16.97■□□□□ 0.31
SIRPA-204ENST00000622179 RAPGEF6Q8TEU7 1601 aa16.96■□□□□ 0.31
SIRPA-204ENST00000622179 E9PSI1 815 aa16.96■□□□□ 0.31
SIRPA-204ENST00000622179 FANCIQ9NVI1 1328 aa16.96■□□□□ 0.31
SIRPA-204ENST00000622179 COG6Q9Y2V7 657 aa16.96■□□□□ 0.3
SIRPA-204ENST00000622179 KIF14Q15058 1648 aa16.96■□□□□ 0.3
SIRPA-204ENST00000622179 ATP10BO94823 1461 aa16.95■□□□□ 0.3
SIRPA-204ENST00000622179 PLEKHH2Q8IVE3 1493 aa16.95■□□□□ 0.3
SIRPA-204ENST00000622179 ADAMTS12P58397 1594 aa16.95■□□□□ 0.3
SIRPA-204ENST00000622179 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
SIRPA-204ENST00000622179 SPRYD3Q8NCJ5 442 aa16.94■□□□□ 0.3
SIRPA-204ENST00000622179 TCOF1Q13428 1488 aaKnown RBP16.94■□□□□ 0.3
SIRPA-204ENST00000622179 WDR62O43379 1518 aa16.94■□□□□ 0.3
SIRPA-204ENST00000622179 ERBINQ96RT1 1412 aa16.93■□□□□ 0.3
SIRPA-204ENST00000622179 CABP2Q9NPB3 220 aa16.93■□□□□ 0.3
SIRPA-204ENST00000622179 SLC12A5Q9H2X9 1139 aa16.92■□□□□ 0.3
SIRPA-204ENST00000622179 RWDD1Q9H446 243 aaPredicted RBP16.92■□□□□ 0.3
SIRPA-204ENST00000622179 RAPGEF3O95398 923 aa16.91■□□□□ 0.3
SIRPA-204ENST00000622179 CENPQQ7L2Z9 268 aaPredicted RBP16.91■□□□□ 0.3
SIRPA-204ENST00000622179 ABCA5Q8WWZ7 1642 aa16.91■□□□□ 0.3
SIRPA-204ENST00000622179 SLC4A3P48751 1232 aa16.91■□□□□ 0.3
SIRPA-204ENST00000622179 IPO8O15397 1037 aaKnown RBP16.91■□□□□ 0.3
SIRPA-204ENST00000622179 KIAA0556O60303 1618 aa16.9■□□□□ 0.3
SIRPA-204ENST00000622179 GGNBP2Q9H3C7 697 aa16.9■□□□□ 0.3
SIRPA-204ENST00000622179 SMG6Q86US8 1419 aaKnown RBP16.9■□□□□ 0.3
SIRPA-204ENST00000622179 ELL2O00472 640 aaPredicted RBP16.89■□□□□ 0.3
SIRPA-204ENST00000622179 MAGI3Q5TCQ9 1506 aa16.89■□□□□ 0.29
SIRPA-204ENST00000622179 TRHP20396 242 aaPredicted RBP16.89■□□□□ 0.29
SIRPA-204ENST00000622179 FAM69CQ0P6D2 419 aa16.89■□□□□ 0.29
SIRPA-204ENST00000622179 MTHFSP49914 203 aa16.89■□□□□ 0.29
SIRPA-204ENST00000622179 DISP1Q96F81 1524 aa16.88■□□□□ 0.29
SIRPA-204ENST00000622179 APBB1O00213 710 aa16.88■□□□□ 0.29
SIRPA-204ENST00000622179 EIF5BO60841 1220 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms