RNA–Protein interactions for RNA: ENST00000621961.1

PCDH7-208, Transcript of protocadherin 7, humanhuman

TSL 5

Gene PCDH7, Length 2,029 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7-208ENST00000621961 RIMBP3BA6NNM3 1639 aa11.71□□□□□ -0.54
PCDH7-208ENST00000621961 RIMBP3Q9UFD9 1639 aa11.71□□□□□ -0.54
PCDH7-208ENST00000621961 SENP3-EIF4A1A0A087X0R7 540 aa11.7□□□□□ -0.54
PCDH7-208ENST00000621961 ZMYM4Q5VZL5 1548 aa11.7□□□□□ -0.54
PCDH7-208ENST00000621961 MBD5Q9P267 1494 aa11.7□□□□□ -0.54
PCDH7-208ENST00000621961 CENPJQ9HC77 1338 aaPredicted RBP11.7□□□□□ -0.54
PCDH7-208ENST00000621961 FSD2A1L4K1 749 aa11.7□□□□□ -0.54
PCDH7-208ENST00000621961 NCBP3Q53F19 620 aaKnown RBP11.69□□□□□ -0.54
PCDH7-208ENST00000621961 PLIN1O60240 522 aa11.69□□□□□ -0.54
PCDH7-208ENST00000621961 GRIN2BQ13224 1484 aa11.68□□□□□ -0.54
PCDH7-208ENST00000621961 XRCC6P12956 609 aaKnown RBP eCLIP11.68□□□□□ -0.54
PCDH7-208ENST00000621961 CHIC2Q9UKJ5 165 aa11.68□□□□□ -0.54
PCDH7-208ENST00000621961 KDM5CP41229 1560 aa11.68□□□□□ -0.54
PCDH7-208ENST00000621961 GOLGA6L3A6NEY3 463 aa11.67□□□□□ -0.54
PCDH7-208ENST00000621961 CNGB1Q14028 1251 aaPredicted RBP11.67□□□□□ -0.54
PCDH7-208ENST00000621961 BECN1Q14457 450 aa11.67□□□□□ -0.54
PCDH7-208ENST00000621961 PLEKHH2Q8IVE3 1493 aa11.67□□□□□ -0.54
PCDH7-208ENST00000621961 NLRP13Q86W25 1043 aa11.67□□□□□ -0.54
PCDH7-208ENST00000621961 CDCA7LQ96GN5 454 aa11.66□□□□□ -0.54
PCDH7-208ENST00000621961 POLR3GLQ9BT43 218 aa11.66□□□□□ -0.54
PCDH7-208ENST00000621961 URB2Q14146 1524 aaKnown RBP11.66□□□□□ -0.54
PCDH7-208ENST00000621961 ROCK1Q13464 1354 aa11.66□□□□□ -0.54
PCDH7-208ENST00000621961 TPM2P07951 284 aa11.65□□□□□ -0.54
PCDH7-208ENST00000621961 SAMD9Q5K651 1589 aa11.65□□□□□ -0.54
PCDH7-208ENST00000621961 KIF14Q15058 1648 aa11.65□□□□□ -0.54
PCDH7-208ENST00000621961 PDCL3Q9H2J4 239 aa11.65□□□□□ -0.54
PCDH7-208ENST00000621961 USP19O94966 1318 aa11.64□□□□□ -0.55
PCDH7-208ENST00000621961 BLMP54132 1417 aaPredicted RBP11.64□□□□□ -0.55
PCDH7-208ENST00000621961 LRRIQ1Q96JM4 1722 aa11.64□□□□□ -0.55
PCDH7-208ENST00000621961 PARD3Q8TEW0 1356 aa11.64□□□□□ -0.55
PCDH7-208ENST00000621961 ANTXR1Q9H6X2 564 aa11.64□□□□□ -0.55
PCDH7-208ENST00000621961 CALD1Q05682 793 aaKnown RBP11.63□□□□□ -0.55
PCDH7-208ENST00000621961 NPM3O75607 178 aaKnown RBP11.62□□□□□ -0.55
PCDH7-208ENST00000621961 C20orf194Q5TEA3 1177 aa11.62□□□□□ -0.55
PCDH7-208ENST00000621961 UHRF1BP1Q6BDS2 1440 aa11.62□□□□□ -0.55
PCDH7-208ENST00000621961 E9PCH4 1651 aa11.62□□□□□ -0.55
PCDH7-208ENST00000621961 MRE11P49959 708 aa11.62□□□□□ -0.55
PCDH7-208ENST00000621961 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
PCDH7-208ENST00000621961 CYB5RLQ6IPT4 315 aa11.61□□□□□ -0.55
PCDH7-208ENST00000621961 ISY1Q9ULR0 285 aaKnown RBP11.61□□□□□ -0.55
PCDH7-208ENST00000621961 RALGAPBQ86X10 1494 aa11.61□□□□□ -0.55
PCDH7-208ENST00000621961 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.6□□□□□ -0.55
PCDH7-208ENST00000621961 VIRMAQ69YN4 1812 aaKnown RBP11.6□□□□□ -0.55
PCDH7-208ENST00000621961 GAPVD1Q14C86 1478 aa11.6□□□□□ -0.55
PCDH7-208ENST00000621961 ESPNB1AK53 854 aa11.6□□□□□ -0.55
PCDH7-208ENST00000621961 PLEKHG5O94827 1062 aa11.6□□□□□ -0.55
PCDH7-208ENST00000621961 RGS3P49796 1198 aa11.59□□□□□ -0.55
PCDH7-208ENST00000621961 PBRM1Q86U86 1689 aa11.58□□□□□ -0.56
PCDH7-208ENST00000621961 MAGI3Q5TCQ9 1506 aa11.58□□□□□ -0.56
PCDH7-208ENST00000621961 PANK2Q9BZ23 570 aa11.58□□□□□ -0.56
PCDH7-208ENST00000621961 MCM4P33991 863 aa11.57□□□□□ -0.56
PCDH7-208ENST00000621961 SLKQ9H2G2 1235 aaPredicted RBP11.57□□□□□ -0.56
PCDH7-208ENST00000621961 PRDM4Q9UKN5 801 aa11.57□□□□□ -0.56
PCDH7-208ENST00000621961 EIF3AQ14152 1382 aaKnown RBP11.57□□□□□ -0.56
PCDH7-208ENST00000621961 TARBP1Q13395 1621 aaKnown RBP11.56□□□□□ -0.56
PCDH7-208ENST00000621961 PZPP20742 1482 aa11.56□□□□□ -0.56
PCDH7-208ENST00000621961 MYH16Q9H6N6 1097 aa11.56□□□□□ -0.56
PCDH7-208ENST00000621961 ZNF608Q9ULD9 1512 aaPredicted RBP11.55□□□□□ -0.56
PCDH7-208ENST00000621961 DAPK1P53355 1430 aa11.55□□□□□ -0.56
PCDH7-208ENST00000621961 MAPK8IP3Q9UPT6 1336 aa11.55□□□□□ -0.56
PCDH7-208ENST00000621961 NLRP1Q9C000 1473 aa11.55□□□□□ -0.56
PCDH7-208ENST00000621961 KIAA1107Q9UPP5 1409 aa11.55□□□□□ -0.56
PCDH7-208ENST00000621961 CARD11Q9BXL7 1154 aa11.55□□□□□ -0.56
PCDH7-208ENST00000621961 TDRD9Q8NDG6 1382 aaKnown RBP11.54□□□□□ -0.56
PCDH7-208ENST00000621961 IFT140Q96RY7 1462 aa11.54□□□□□ -0.56
PCDH7-208ENST00000621961 TRAK2O60296 914 aa11.53□□□□□ -0.56
PCDH7-208ENST00000621961 TERF1P54274 439 aa11.53□□□□□ -0.56
PCDH7-208ENST00000621961 DUSP27Q5VZP5 1158 aa11.53□□□□□ -0.56
PCDH7-208ENST00000621961 GRPEL1Q9HAV7 217 aa11.53□□□□□ -0.56
PCDH7-208ENST00000621961 ZMYM3Q14202 1370 aa11.53□□□□□ -0.56
PCDH7-208ENST00000621961 PER1O15534 1290 aaPredicted RBP11.53□□□□□ -0.56
PCDH7-208ENST00000621961 MAP7D2Q96T17 732 aa11.53□□□□□ -0.56
PCDH7-208ENST00000621961 ARHGEF12Q9NZN5 1544 aa11.53□□□□□ -0.56
PCDH7-208ENST00000621961 ERBB4Q15303 1308 aa11.52□□□□□ -0.56
PCDH7-208ENST00000621961 ST20-MTHFSA0A0A6YYL1 179 aa11.52□□□□□ -0.56
PCDH7-208ENST00000621961 ZNF326Q5BKZ1 582 aaKnown RBP11.52□□□□□ -0.56
PCDH7-208ENST00000621961 CCDC144AA2RUR9 1427 aa11.52□□□□□ -0.57
PCDH7-208ENST00000621961 ABCC5O15440 1437 aa11.52□□□□□ -0.57
PCDH7-208ENST00000621961 DNMT1P26358 1616 aaKnown RBP11.52□□□□□ -0.57
PCDH7-208ENST00000621961 SEC24BO95487 1268 aa11.52□□□□□ -0.57
PCDH7-208ENST00000621961 RBM10P98175 930 aaKnown RBP11.52□□□□□ -0.57
PCDH7-208ENST00000621961 TBC1D2Q9BYX2 928 aa11.52□□□□□ -0.57
PCDH7-208ENST00000621961 TBC1D32Q96NH3 1257 aa11.51□□□□□ -0.57
PCDH7-208ENST00000621961 UPF2Q9HAU5 1272 aaKnown RBP11.51□□□□□ -0.57
PCDH7-208ENST00000621961 CHMP5Q9NZZ3 219 aa11.51□□□□□ -0.57
PCDH7-208ENST00000621961 TRIM44Q96DX7 344 aaPredicted RBP11.5□□□□□ -0.57
PCDH7-208ENST00000621961 ZNF521Q96K83 1311 aa11.5□□□□□ -0.57
PCDH7-208ENST00000621961 ADAMTS12P58397 1594 aa11.5□□□□□ -0.57
PCDH7-208ENST00000621961 ARXQ96QS3 562 aa11.5□□□□□ -0.57
PCDH7-208ENST00000621961 GZF1Q9H116 711 aaPredicted RBP11.5□□□□□ -0.57
PCDH7-208ENST00000621961 IQGAP2Q13576 1575 aa11.49□□□□□ -0.57
PCDH7-208ENST00000621961 DDX11L8A8MPP1 907 aa11.49□□□□□ -0.57
PCDH7-208ENST00000621961 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
PCDH7-208ENST00000621961 IGHDP01880 384 aa11.48□□□□□ -0.57
PCDH7-208ENST00000621961 AAMPQ13685 434 aa11.48□□□□□ -0.57
PCDH7-208ENST00000621961 KIAA1211Q6ZU35 1233 aa11.48□□□□□ -0.57
PCDH7-208ENST00000621961 TRMT2AQ8IZ69 625 aaKnown RBP11.48□□□□□ -0.57
PCDH7-208ENST00000621961 OFD1O75665 1012 aa11.47□□□□□ -0.57
PCDH7-208ENST00000621961 CLASP1Q7Z460 1538 aa11.47□□□□□ -0.57
PCDH7-208ENST00000621961 SLC24A1O60721 1099 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms