RNA–Protein interactions for RNA: ENST00000621176.1

TRIM6-212, Transcript of tripartite motif containing 6, humanhuman

TSL 5 BASIC

Gene TRIM6, Length 3,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-212ENST00000621176 KTN1Q86UP2 1357 aaKnown RBP11.73□□□□□ -0.53
TRIM6-212ENST00000621176 PLEKHD1A6NEE1 506 aa11.73□□□□□ -0.53
TRIM6-212ENST00000621176 TSPY4P0CV99 314 aa11.72□□□□□ -0.53
TRIM6-212ENST00000621176 TSPY10P0CW01 314 aa11.72□□□□□ -0.53
TRIM6-212ENST00000621176 HNRNPMP52272 730 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRIM6-212ENST00000621176 FBLN2P98095 1184 aa11.72□□□□□ -0.53
TRIM6-212ENST00000621176 JPH4Q96JJ6 628 aa11.72□□□□□ -0.53
TRIM6-212ENST00000621176 E9PCH4 1651 aa11.72□□□□□ -0.53
TRIM6-212ENST00000621176 ABCC10Q5T3U5 1492 aa11.71□□□□□ -0.53
TRIM6-212ENST00000621176 SHANK2Q9UPX8 1470 aa11.71□□□□□ -0.53
TRIM6-212ENST00000621176 KDM5DQ9BY66 1539 aa11.71□□□□□ -0.53
TRIM6-212ENST00000621176 NLRP13Q86W25 1043 aa11.71□□□□□ -0.54
TRIM6-212ENST00000621176 PTPRGP23470 1445 aa11.71□□□□□ -0.54
TRIM6-212ENST00000621176 CDCA7LQ96GN5 454 aa11.7□□□□□ -0.54
TRIM6-212ENST00000621176 PARD3Q8TEW0 1356 aa11.7□□□□□ -0.54
TRIM6-212ENST00000621176 PER1O15534 1290 aaPredicted RBP11.7□□□□□ -0.54
TRIM6-212ENST00000621176 NBPF1Q3BBV0 1214 aa11.7□□□□□ -0.54
TRIM6-212ENST00000621176 MAGI1Q96QZ7 1491 aaPredicted RBP11.7□□□□□ -0.54
TRIM6-212ENST00000621176 CARMIL2Q6F5E8 1435 aa11.69□□□□□ -0.54
TRIM6-212ENST00000621176 ATP10BO94823 1461 aa11.69□□□□□ -0.54
TRIM6-212ENST00000621176 NPM2Q86SE8 214 aaKnown RBP11.69□□□□□ -0.54
TRIM6-212ENST00000621176 RGL3Q3MIN7 710 aa11.68□□□□□ -0.54
TRIM6-212ENST00000621176 TCERG1O14776 1098 aaKnown RBP11.68□□□□□ -0.54
TRIM6-212ENST00000621176 PDE4AP27815 886 aa11.68□□□□□ -0.54
TRIM6-212ENST00000621176 SYNJ2O15056 1496 aa11.67□□□□□ -0.54
TRIM6-212ENST00000621176 PLIN1O60240 522 aa11.67□□□□□ -0.54
TRIM6-212ENST00000621176 PDE3BQ13370 1112 aa11.67□□□□□ -0.54
TRIM6-212ENST00000621176 PRAG1Q86YV5 1406 aa11.67□□□□□ -0.54
TRIM6-212ENST00000621176 ABCA8O94911 1581 aa11.66□□□□□ -0.54
TRIM6-212ENST00000621176 CC2D1BQ5T0F9 858 aaKnown RBP11.66□□□□□ -0.54
TRIM6-212ENST00000621176 BACH2Q9BYV9 841 aa11.66□□□□□ -0.54
TRIM6-212ENST00000621176 RTL5Q5HYW3 569 aaPredicted RBP11.65□□□□□ -0.54
TRIM6-212ENST00000621176 FAM135AQ9P2D6 1515 aa11.65□□□□□ -0.54
TRIM6-212ENST00000621176 TRPM1Q7Z4N2 1603 aa11.65□□□□□ -0.54
TRIM6-212ENST00000621176 SKAP1Q86WV1 359 aa11.65□□□□□ -0.55
TRIM6-212ENST00000621176 CCDC144AA2RUR9 1427 aa11.64□□□□□ -0.55
TRIM6-212ENST00000621176 NUP160Q12769 1436 aa11.64□□□□□ -0.55
TRIM6-212ENST00000621176 TESK2Q96S53 571 aa11.64□□□□□ -0.55
TRIM6-212ENST00000621176 DISP3Q9P2K9 1392 aa11.64□□□□□ -0.55
TRIM6-212ENST00000621176 PLA2R1Q13018 1463 aa11.63□□□□□ -0.55
TRIM6-212ENST00000621176 PANK3Q9H999 370 aa11.63□□□□□ -0.55
TRIM6-212ENST00000621176 ARHGEF5Q12774 1597 aa11.62□□□□□ -0.55
TRIM6-212ENST00000621176 GPRASP1Q5JY77 1395 aa11.62□□□□□ -0.55
TRIM6-212ENST00000621176 MS4A1P11836 297 aa11.62□□□□□ -0.55
TRIM6-212ENST00000621176 A2MP01023 1474 aa11.62□□□□□ -0.55
TRIM6-212ENST00000621176 COL17A1Q9UMD9 1497 aaPredicted RBP11.62□□□□□ -0.55
TRIM6-212ENST00000621176 CRBNQ96SW2 442 aa11.61□□□□□ -0.55
TRIM6-212ENST00000621176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRIM6-212ENST00000621176 LAS1LQ9Y4W2 734 aaKnown RBP11.61□□□□□ -0.55
TRIM6-212ENST00000621176 CCDC141Q6ZP82 1450 aa11.61□□□□□ -0.55
TRIM6-212ENST00000621176 SAMD9LQ8IVG5 1584 aa11.6□□□□□ -0.55
TRIM6-212ENST00000621176 BLMP54132 1417 aaPredicted RBP11.6□□□□□ -0.55
TRIM6-212ENST00000621176 WASHC2CQ9Y4E1 1318 aa11.6□□□□□ -0.55
TRIM6-212ENST00000621176 C20orf194Q5TEA3 1177 aa11.59□□□□□ -0.55
TRIM6-212ENST00000621176 PRDM15P57071 1507 aaPredicted RBP11.58□□□□□ -0.56
TRIM6-212ENST00000621176 CDC42BPBQ9Y5S2 1711 aa11.58□□□□□ -0.56
TRIM6-212ENST00000621176 ERBINQ96RT1 1412 aa11.58□□□□□ -0.56
TRIM6-212ENST00000621176 NEFMP07197 916 aa11.58□□□□□ -0.56
TRIM6-212ENST00000621176 ADAMTS8Q9UP79 889 aa11.58□□□□□ -0.56
TRIM6-212ENST00000621176 INSRP06213 1382 aa11.57□□□□□ -0.56
TRIM6-212ENST00000621176 RSPH4AQ5TD94 716 aa11.57□□□□□ -0.56
TRIM6-212ENST00000621176 TMF1P82094 1093 aa11.56□□□□□ -0.56
TRIM6-212ENST00000621176 ERCC6Q03468 1493 aa11.56□□□□□ -0.56
TRIM6-212ENST00000621176 ZMYM4Q5VZL5 1548 aa11.55□□□□□ -0.56
TRIM6-212ENST00000621176 SYCP2Q9BX26 1530 aa11.55□□□□□ -0.56
TRIM6-212ENST00000621176 PREX2Q70Z35 1606 aa11.55□□□□□ -0.56
TRIM6-212ENST00000621176 LAMC1P11047 1609 aa11.55□□□□□ -0.56
TRIM6-212ENST00000621176 PLEKHH2Q8IVE3 1493 aa11.55□□□□□ -0.56
TRIM6-212ENST00000621176 UNC13BO14795 1591 aa11.54□□□□□ -0.56
TRIM6-212ENST00000621176 PLEKHH1Q9ULM0 1364 aa11.54□□□□□ -0.56
TRIM6-212ENST00000621176 USP35Q9P2H5 1018 aa11.54□□□□□ -0.56
TRIM6-212ENST00000621176 KDM2BQ8NHM5 1336 aa11.53□□□□□ -0.56
TRIM6-212ENST00000621176 MYO5CQ9NQX4 1742 aa11.53□□□□□ -0.56
TRIM6-212ENST00000621176 DUSP27Q5VZP5 1158 aa11.53□□□□□ -0.56
TRIM6-212ENST00000621176 MAGI2Q86UL8 1455 aa11.53□□□□□ -0.56
TRIM6-212ENST00000621176 IL27Q8NEV9 243 aa11.53□□□□□ -0.56
TRIM6-212ENST00000621176 PPP2R1AP30153 589 aa11.52□□□□□ -0.57
TRIM6-212ENST00000621176 WDR7Q9Y4E6 1490 aa11.52□□□□□ -0.57
TRIM6-212ENST00000621176 PPM1GO15355 546 aaPredicted RBP11.51□□□□□ -0.57
TRIM6-212ENST00000621176 ARHGAP5Q13017 1502 aa11.51□□□□□ -0.57
TRIM6-212ENST00000621176 IQGAP3Q86VI3 1631 aa11.51□□□□□ -0.57
TRIM6-212ENST00000621176 SLC4A3P48751 1232 aa11.51□□□□□ -0.57
TRIM6-212ENST00000621176 EIF2AK4Q9P2K8 1649 aaKnown RBP11.51□□□□□ -0.57
TRIM6-212ENST00000621176 AMER1Q5JTC6 1135 aaPredicted RBP11.5□□□□□ -0.57
TRIM6-212ENST00000621176 KNSTRNQ9Y448 316 aa11.5□□□□□ -0.57
TRIM6-212ENST00000621176 ZNF521Q96K83 1311 aa11.5□□□□□ -0.57
TRIM6-212ENST00000621176 TTC37Q6PGP7 1564 aa11.5□□□□□ -0.57
TRIM6-212ENST00000621176 MAST1Q9Y2H9 1570 aa11.5□□□□□ -0.57
TRIM6-212ENST00000621176 ATP10AO60312 1499 aa11.5□□□□□ -0.57
TRIM6-212ENST00000621176 WDR43Q15061 677 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRIM6-212ENST00000621176 DDRGK1Q96HY6 314 aa11.49□□□□□ -0.57
TRIM6-212ENST00000621176 CENPQQ7L2Z9 268 aaPredicted RBP11.49□□□□□ -0.57
TRIM6-212ENST00000621176 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRIM6-212ENST00000621176 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
TRIM6-212ENST00000621176 RNF17Q9BXT8 1623 aaKnown RBP11.48□□□□□ -0.57
TRIM6-212ENST00000621176 C8orf34Q49A92 452 aa11.47□□□□□ -0.57
TRIM6-212ENST00000621176 PLXNC1O60486 1568 aa11.47□□□□□ -0.57
TRIM6-212ENST00000621176 SPINK5Q9NQ38 1064 aaPredicted RBP11.46□□□□□ -0.57
TRIM6-212ENST00000621176 RTN4Q9NQC3 1192 aaKnown RBP11.46□□□□□ -0.57
TRIM6-212ENST00000621176 SLFN5Q08AF3 891 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms