RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 KIAA0556O60303 1618 aa6.99□□□□□ -1.29
MATR3-228ENST00000620916 CAPN15O75808 1086 aa6.98□□□□□ -1.29
MATR3-228ENST00000620916 WASHC2AQ641Q2 1341 aa6.98□□□□□ -1.29
MATR3-228ENST00000620916 CERKQ8TCT0 537 aa6.98□□□□□ -1.29
MATR3-228ENST00000620916 CENPJQ9HC77 1338 aaPredicted RBP6.98□□□□□ -1.29
MATR3-228ENST00000620916 TEX2Q8IWB9 1127 aa6.97□□□□□ -1.29
MATR3-228ENST00000620916 CIZ1Q9ULV3 898 aaPredicted RBP6.97□□□□□ -1.29
MATR3-228ENST00000620916 POGZQ7Z3K3 1410 aa6.97□□□□□ -1.29
MATR3-228ENST00000620916 CDK11BP21127 795 aaKnown RBP6.97□□□□□ -1.29
MATR3-228ENST00000620916 PLCD3Q8N3E9 789 aa6.97□□□□□ -1.29
MATR3-228ENST00000620916 ABCA8O94911 1581 aa6.97□□□□□ -1.29
MATR3-228ENST00000620916 CALD1Q05682 793 aaKnown RBP6.96□□□□□ -1.3
MATR3-228ENST00000620916 ABCA9Q8IUA7 1624 aa6.96□□□□□ -1.3
MATR3-228ENST00000620916 PRXQ9BXM0 1461 aa6.95□□□□□ -1.3
MATR3-228ENST00000620916 FAM43AQ8N2R8 423 aa6.95□□□□□ -1.3
MATR3-228ENST00000620916 MAGI2Q86UL8 1455 aa6.94□□□□□ -1.3
MATR3-228ENST00000620916 MIER1Q8N108 512 aa6.94□□□□□ -1.3
MATR3-228ENST00000620916 PRDM4Q9UKN5 801 aa6.94□□□□□ -1.3
MATR3-228ENST00000620916 SPATA31D1Q6ZQQ2 1576 aa6.94□□□□□ -1.3
MATR3-228ENST00000620916 CFAP74Q9C0B2 1584 aa6.94□□□□□ -1.3
MATR3-228ENST00000620916 USP35Q9P2H5 1018 aa6.94□□□□□ -1.3
MATR3-228ENST00000620916 RAPGEF2Q9Y4G8 1499 aa6.93□□□□□ -1.3
MATR3-228ENST00000620916 ARHGEF40Q8TER5 1519 aa6.93□□□□□ -1.3
MATR3-228ENST00000620916 DISP3Q9P2K9 1392 aa6.93□□□□□ -1.3
MATR3-228ENST00000620916 FANCAO15360 1455 aa6.93□□□□□ -1.3
MATR3-228ENST00000620916 NBR1Q14596 966 aa6.93□□□□□ -1.3
MATR3-228ENST00000620916 RNF25Q96BH1 459 aaPredicted RBP6.93□□□□□ -1.3
MATR3-228ENST00000620916 MADDQ8WXG6 1647 aa6.93□□□□□ -1.3
MATR3-228ENST00000620916 VGFO15240 615 aaPredicted RBP6.92□□□□□ -1.3
MATR3-228ENST00000620916 GTF2E1P29083 439 aaPredicted RBP6.92□□□□□ -1.3
MATR3-228ENST00000620916 ZMYM4Q5VZL5 1548 aa6.92□□□□□ -1.3
MATR3-228ENST00000620916 PTPRTO14522 1441 aa6.92□□□□□ -1.3
MATR3-228ENST00000620916 RTL5Q5HYW3 569 aaPredicted RBP6.92□□□□□ -1.3
MATR3-228ENST00000620916 FHOD3Q2V2M9 1422 aa6.91□□□□□ -1.3
MATR3-228ENST00000620916 TTC37Q6PGP7 1564 aa6.91□□□□□ -1.3
MATR3-228ENST00000620916 ARID3AQ99856 593 aa6.91□□□□□ -1.3
MATR3-228ENST00000620916 NOP58Q9Y2X3 529 aaKnown RBP6.91□□□□□ -1.3
MATR3-228ENST00000620916 AKNAQ7Z591 1439 aa6.91□□□□□ -1.3
MATR3-228ENST00000620916 ARID4BQ4LE39 1312 aaPredicted RBP6.91□□□□□ -1.3
MATR3-228ENST00000620916 HSP90AA2PQ14568 343 aaPredicted RBP6.9□□□□□ -1.3
MATR3-228ENST00000620916 FTSJ3Q8IY81 847 aaKnown RBP6.9□□□□□ -1.3
MATR3-228ENST00000620916 YEATS2Q9ULM3 1422 aa6.9□□□□□ -1.3
MATR3-228ENST00000620916 PREX1Q8TCU6 1659 aa6.9□□□□□ -1.31
MATR3-228ENST00000620916 NKX1-1Q15270 411 aaPredicted RBP6.9□□□□□ -1.31
MATR3-228ENST00000620916 HMGB1P09429 215 aaKnown RBP6.89□□□□□ -1.31
MATR3-228ENST00000620916 FRMPD1Q5SYB0 1578 aa6.89□□□□□ -1.31
MATR3-228ENST00000620916 NEURL4Q96JN8 1562 aa6.89□□□□□ -1.31
MATR3-228ENST00000620916 RIMS1Q86UR5 1692 aaKnown RBP6.89□□□□□ -1.31
MATR3-228ENST00000620916 ZNF692Q9BU19 519 aaPredicted RBP6.89□□□□□ -1.31
MATR3-228ENST00000620916 ZFP91Q96JP5 570 aaPredicted RBP6.88□□□□□ -1.31
MATR3-228ENST00000620916 NCLP19338 710 aaKnown RBP6.88□□□□□ -1.31
MATR3-228ENST00000620916 ILDR2Q71H61 639 aa6.88□□□□□ -1.31
MATR3-228ENST00000620916 STAC3Q96MF2 364 aa6.88□□□□□ -1.31
MATR3-228ENST00000620916 DENND4BO75064 1496 aaPredicted RBP6.88□□□□□ -1.31
MATR3-228ENST00000620916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.87□□□□□ -1.31
MATR3-228ENST00000620916 CANXP27824 592 aaKnown RBP6.87□□□□□ -1.31
MATR3-228ENST00000620916 RICTORQ6R327 1708 aa6.86□□□□□ -1.31
MATR3-228ENST00000620916 CHMP4BQ9H444 224 aaKnown RBP6.86□□□□□ -1.31
MATR3-228ENST00000620916 PPM1GO15355 546 aaPredicted RBP6.86□□□□□ -1.31
MATR3-228ENST00000620916 CNGB1Q14028 1251 aaPredicted RBP6.86□□□□□ -1.31
MATR3-228ENST00000620916 ARHGEF12Q9NZN5 1544 aa6.86□□□□□ -1.31
MATR3-228ENST00000620916 ATP10BO94823 1461 aa6.86□□□□□ -1.31
MATR3-228ENST00000620916 ZFYVE16Q7Z3T8 1539 aa6.85□□□□□ -1.31
MATR3-228ENST00000620916 FAM135AQ9P2D6 1515 aa6.85□□□□□ -1.31
MATR3-228ENST00000620916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.84□□□□□ -1.31
MATR3-228ENST00000620916 REREQ9P2R6 1566 aa6.84□□□□□ -1.31
MATR3-228ENST00000620916 KCNH8Q96L42 1107 aa6.84□□□□□ -1.31
MATR3-228ENST00000620916 FER1L4A9Z1Z3 1794 aa6.84□□□□□ -1.31
MATR3-228ENST00000620916 SECISBP2LQ93073 1101 aaKnown RBP6.83□□□□□ -1.32
MATR3-228ENST00000620916 UHRF1BP1Q6BDS2 1440 aa6.83□□□□□ -1.32
MATR3-228ENST00000620916 SETD1BQ9UPS6 1966 aaKnown RBP6.82□□□□□ -1.32
MATR3-228ENST00000620916 TICAM2Q86XR7 235 aa6.82□□□□□ -1.32
MATR3-228ENST00000620916 CROCC2H7BZ55 1655 aa6.82□□□□□ -1.32
MATR3-228ENST00000620916 LTBP4Q8N2S1 1624 aa6.82□□□□□ -1.32
MATR3-228ENST00000620916 HSP90AA1P07900 732 aaKnown RBP6.82□□□□□ -1.32
MATR3-228ENST00000620916 TMEM132AQ24JP5 1023 aa6.82□□□□□ -1.32
MATR3-228ENST00000620916 STRCQ7RTU9 1775 aa6.82□□□□□ -1.32
MATR3-228ENST00000620916 C9orf84Q5VXU9 1444 aa6.82□□□□□ -1.32
MATR3-228ENST00000620916 ATP10AO60312 1499 aa6.81□□□□□ -1.32
MATR3-228ENST00000620916 RAPGEF6Q8TEU7 1601 aa6.81□□□□□ -1.32
MATR3-228ENST00000620916 RAPGEF3O95398 923 aa6.8□□□□□ -1.32
MATR3-228ENST00000620916 GRIPAP1Q4V328 841 aa6.8□□□□□ -1.32
MATR3-228ENST00000620916 AGLP35573 1532 aa6.8□□□□□ -1.32
MATR3-228ENST00000620916 PDCL3Q9H2J4 239 aa6.79□□□□□ -1.32
MATR3-228ENST00000620916 MAST1Q9Y2H9 1570 aa6.79□□□□□ -1.32
MATR3-228ENST00000620916 CNTLNQ9NXG0 1405 aa6.79□□□□□ -1.32
MATR3-228ENST00000620916 HSPA2P54652 639 aa6.79□□□□□ -1.32
MATR3-228ENST00000620916 CCDC9Q9Y3X0 531 aaKnown RBP6.79□□□□□ -1.32
MATR3-228ENST00000620916 MMP14P50281 582 aa6.78□□□□□ -1.32
MATR3-228ENST00000620916 LRRIQ1Q96JM4 1722 aa6.78□□□□□ -1.32
MATR3-228ENST00000620916 GTPBP6O43824 516 aaPredicted RBP6.78□□□□□ -1.32
MATR3-228ENST00000620916 BRPF3Q9ULD4 1205 aa6.78□□□□□ -1.32
MATR3-228ENST00000620916 GCC2Q8IWJ2 1684 aa6.78□□□□□ -1.32
MATR3-228ENST00000620916 NPATQ14207 1427 aa6.78□□□□□ -1.32
MATR3-228ENST00000620916 HECW1Q76N89 1606 aa6.77□□□□□ -1.33
MATR3-228ENST00000620916 HS6ST3Q8IZP7 471 aa6.77□□□□□ -1.33
MATR3-228ENST00000620916 RNF39Q9H2S5 420 aa6.77□□□□□ -1.33
MATR3-228ENST00000620916 CLSTN1O94985 981 aa6.77□□□□□ -1.33
MATR3-228ENST00000620916 CACNB1Q02641 598 aaPredicted RBP6.77□□□□□ -1.33
MATR3-228ENST00000620916 NCOA1Q15788 1441 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms