RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 EFCAB2Q5VUJ9 269 aa8.92□□□□□ -0.98
COLCA1-205ENST00000620864 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.92□□□□□ -0.98
COLCA1-205ENST00000620864 JPH4Q96JJ6 628 aa8.92□□□□□ -0.98
COLCA1-205ENST00000620864 HDAC5Q9UQL6 1122 aa8.92□□□□□ -0.98
COLCA1-205ENST00000620864 CARMIL1Q5VZK9 1371 aa8.92□□□□□ -0.98
COLCA1-205ENST00000620864 ZNF710Q8N1W2 664 aa8.92□□□□□ -0.98
COLCA1-205ENST00000620864 EEA1Q15075 1411 aa8.91□□□□□ -0.98
COLCA1-205ENST00000620864 TSR1Q2NL82 804 aaKnown RBP8.91□□□□□ -0.98
COLCA1-205ENST00000620864 ATP6V1DQ9Y5K8 247 aa8.91□□□□□ -0.98
COLCA1-205ENST00000620864 TPM1P09493 284 aa8.91□□□□□ -0.98
COLCA1-205ENST00000620864 RWDD1Q9H446 243 aaPredicted RBP8.91□□□□□ -0.98
COLCA1-205ENST00000620864 DMRT2Q9Y5R5 561 aa8.91□□□□□ -0.98
COLCA1-205ENST00000620864 KIF16BQ96L93 1317 aa8.9□□□□□ -0.98
COLCA1-205ENST00000620864 PMFBP1Q8TBY8 1022 aa8.9□□□□□ -0.98
COLCA1-205ENST00000620864 HSP90B1P14625 803 aaKnown RBP8.9□□□□□ -0.98
COLCA1-205ENST00000620864 ARGLU1Q9NWB6 273 aaPredicted RBP8.9□□□□□ -0.98
COLCA1-205ENST00000620864 UBAP1LF5GYI3 381 aa8.9□□□□□ -0.99
COLCA1-205ENST00000620864 CADPSQ9ULU8 1353 aa8.89□□□□□ -0.99
COLCA1-205ENST00000620864 DCTN1Q14203 1278 aa8.89□□□□□ -0.99
COLCA1-205ENST00000620864 CCDC191Q8NCU4 936 aa8.89□□□□□ -0.99
COLCA1-205ENST00000620864 AK7Q96M32 723 aa8.88□□□□□ -0.99
COLCA1-205ENST00000620864 SRPK2P78362 688 aaKnown RBP8.88□□□□□ -0.99
COLCA1-205ENST00000620864 EVA1CP58658 441 aa8.88□□□□□ -0.99
COLCA1-205ENST00000620864 KIF3BO15066 747 aa8.88□□□□□ -0.99
COLCA1-205ENST00000620864 TPM2P07951 284 aa8.88□□□□□ -0.99
COLCA1-205ENST00000620864 CNKSR2Q8WXI2 1034 aa8.88□□□□□ -0.99
COLCA1-205ENST00000620864 GPATCH3Q96I76 525 aa8.88□□□□□ -0.99
COLCA1-205ENST00000620864 DNAJC5BQ9UF47 199 aa8.88□□□□□ -0.99
COLCA1-205ENST00000620864 FRAT1Q92837 279 aaPredicted RBP8.87□□□□□ -0.99
COLCA1-205ENST00000620864 WASHC2CQ9Y4E1 1318 aa8.87□□□□□ -0.99
COLCA1-205ENST00000620864 TAF3Q5VWG9 929 aa8.87□□□□□ -0.99
COLCA1-205ENST00000620864 RDXP35241 583 aaKnown RBP8.87□□□□□ -0.99
COLCA1-205ENST00000620864 NUTM2FA1L443 756 aa8.87□□□□□ -0.99
COLCA1-205ENST00000620864 ST18O60284 1047 aa8.87□□□□□ -0.99
COLCA1-205ENST00000620864 GSE1Q14687 1217 aa8.86□□□□□ -0.99
COLCA1-205ENST00000620864 B4GALNT3Q6L9W6 998 aa8.86□□□□□ -0.99
COLCA1-205ENST00000620864 WDHD1O75717 1129 aaPredicted RBP8.85□□□□□ -0.99
COLCA1-205ENST00000620864 MAPK8IP2Q13387 824 aaPredicted RBP8.85□□□□□ -0.99
COLCA1-205ENST00000620864 FANCD2Q9BXW9 1451 aa8.85□□□□□ -0.99
COLCA1-205ENST00000620864 GOLGA6L19H0YKK7 550 aa8.85□□□□□ -0.99
COLCA1-205ENST00000620864 RFX1P22670 979 aa8.85□□□□□ -0.99
COLCA1-205ENST00000620864 ERCC4Q92889 916 aaPredicted RBP8.85□□□□□ -0.99
COLCA1-205ENST00000620864 IPO7O95373 1038 aaKnown RBP8.84□□□□□ -0.99
COLCA1-205ENST00000620864 PHLDB1Q86UU1 1377 aa8.84□□□□□ -0.99
COLCA1-205ENST00000620864 RBM33Q96EV2 1170 aaKnown RBP8.84□□□□□ -0.99
COLCA1-205ENST00000620864 HSP90B2PQ58FF3 399 aa8.84□□□□□ -0.99
COLCA1-205ENST00000620864 DIAPH3Q9NSV4 1193 aa8.84□□□□□ -0.99
COLCA1-205ENST00000620864 KCNA4P22459 653 aa8.84□□□□□ -0.99
COLCA1-205ENST00000620864 GZF1Q9H116 711 aaPredicted RBP8.83□□□□□ -1
COLCA1-205ENST00000620864 DHX8Q14562 1220 aaKnown RBP8.83□□□□□ -1
COLCA1-205ENST00000620864 RUFY1Q96T51 708 aa8.83□□□□□ -1
COLCA1-205ENST00000620864 SPAG9O60271 1321 aaKnown RBP8.83□□□□□ -1
COLCA1-205ENST00000620864 STK11IPQ8N1F8 1099 aa8.83□□□□□ -1
COLCA1-205ENST00000620864 CARD11Q9BXL7 1154 aa8.83□□□□□ -1
COLCA1-205ENST00000620864 HNRNPMP52272 730 aaKnown RBP eCLIP8.82□□□□□ -1
COLCA1-205ENST00000620864 USP8P40818 1118 aa8.82□□□□□ -1
COLCA1-205ENST00000620864 U2SURPO15042 1029 aaKnown RBP8.82□□□□□ -1
COLCA1-205ENST00000620864 ANKRD20A12PQ8NF67 263 aa8.82□□□□□ -1
COLCA1-205ENST00000620864 PTPRGP23470 1445 aa8.82□□□□□ -1
COLCA1-205ENST00000620864 EIF4E1BA6NMX2 242 aaKnown RBP8.82□□□□□ -1
COLCA1-205ENST00000620864 GTF2E1P29083 439 aaPredicted RBP8.82□□□□□ -1
COLCA1-205ENST00000620864 ZRSR2Q15696 482 aaKnown RBP8.82□□□□□ -1
COLCA1-205ENST00000620864 NGDNQ8NEJ9 315 aaKnown RBP8.82□□□□□ -1
COLCA1-205ENST00000620864 NEXNQ0ZGT2 675 aa8.81□□□□□ -1
COLCA1-205ENST00000620864 CCAR1Q8IX12 1150 aaKnown RBP8.81□□□□□ -1
COLCA1-205ENST00000620864 HOOK1Q9UJC3 728 aaKnown RBP8.81□□□□□ -1
COLCA1-205ENST00000620864 MYO6Q9UM54 1294 aa8.81□□□□□ -1
COLCA1-205ENST00000620864 PDE3BQ13370 1112 aa8.81□□□□□ -1
COLCA1-205ENST00000620864 TAF7LQ5H9L4 462 aa8.8□□□□□ -1
COLCA1-205ENST00000620864 GOLGA3Q08378 1498 aa8.8□□□□□ -1
COLCA1-205ENST00000620864 TMF1P82094 1093 aa8.8□□□□□ -1
COLCA1-205ENST00000620864 ATF3P18847 181 aa8.8□□□□□ -1
COLCA1-205ENST00000620864 CAGE1Q8TC20 777 aa8.8□□□□□ -1
COLCA1-205ENST00000620864 FAM43AQ8N2R8 423 aa8.8□□□□□ -1
COLCA1-205ENST00000620864 BECN2A8MW95 431 aa8.79□□□□□ -1
COLCA1-205ENST00000620864 SLKQ9H2G2 1235 aaPredicted RBP8.79□□□□□ -1
COLCA1-205ENST00000620864 FANCIQ9NVI1 1328 aa8.79□□□□□ -1
COLCA1-205ENST00000620864 KTN1Q86UP2 1357 aaKnown RBP8.79□□□□□ -1
COLCA1-205ENST00000620864 RALBP1Q15311 655 aa8.79□□□□□ -1
COLCA1-205ENST00000620864 TSPYL1Q9H0U9 437 aa8.79□□□□□ -1
COLCA1-205ENST00000620864 TPD52L1Q16890 204 aaPredicted RBP8.79□□□□□ -1
COLCA1-205ENST00000620864 CCP110O43303 1012 aa8.79□□□□□ -1
COLCA1-205ENST00000620864 HMGN5P82970 282 aaKnown RBP8.79□□□□□ -1
COLCA1-205ENST00000620864 INCENPQ9NQS7 918 aa8.79□□□□□ -1
COLCA1-205ENST00000620864 RCAN3Q9UKA8 241 aa8.79□□□□□ -1
COLCA1-205ENST00000620864 RTF1Q92541 710 aaKnown RBP8.79□□□□□ -1
COLCA1-205ENST00000620864 PDIA4P13667 645 aaKnown RBP8.78□□□□□ -1
COLCA1-205ENST00000620864 VPS53Q5VIR6 699 aa8.78□□□□□ -1
COLCA1-205ENST00000620864 SPRYD3Q8NCJ5 442 aa8.78□□□□□ -1
COLCA1-205ENST00000620864 H0YHG0 523 aa8.78□□□□□ -1
COLCA1-205ENST00000620864 GPR162Q16538 588 aa8.78□□□□□ -1
COLCA1-205ENST00000620864 GOLGA6L7A0A1B0GV03 622 aa8.77□□□□□ -1
COLCA1-205ENST00000620864 RASSF8Q8NHQ8 419 aa8.77□□□□□ -1
COLCA1-205ENST00000620864 FRAT2O75474 233 aaPredicted RBP8.77□□□□□ -1.01
COLCA1-205ENST00000620864 CC2D2AQ9P2K1 1620 aa8.77□□□□□ -1.01
COLCA1-205ENST00000620864 CCDC88BA6NC98 1476 aa8.77□□□□□ -1.01
COLCA1-205ENST00000620864 SF3A1Q15459 793 aaKnown RBP8.77□□□□□ -1.01
COLCA1-205ENST00000620864 CCDC47Q96A33 483 aaKnown RBP8.77□□□□□ -1.01
COLCA1-205ENST00000620864 CAVIN1Q6NZI2 390 aaKnown RBP8.77□□□□□ -1.01
COLCA1-205ENST00000620864 NBPF8Q3BBV2 869 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms