RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 GGT6Q6P531 493 aa12.18□□□□□ -0.46
RBFOX1-223ENST00000620507 AFAP1Q8N556 730 aa12.17□□□□□ -0.46
RBFOX1-223ENST00000620507 DNMT1P26358 1616 aaKnown RBP12.17□□□□□ -0.46
RBFOX1-223ENST00000620507 NBPF1Q3BBV0 1214 aa12.17□□□□□ -0.46
RBFOX1-223ENST00000620507 SENP3Q9H4L4 574 aaPredicted RBP12.17□□□□□ -0.46
RBFOX1-223ENST00000620507 ITSN2Q9NZM3 1697 aa12.17□□□□□ -0.46
RBFOX1-223ENST00000620507 NUP160Q12769 1436 aa12.16□□□□□ -0.46
RBFOX1-223ENST00000620507 RCAN3Q9UKA8 241 aa12.15□□□□□ -0.46
RBFOX1-223ENST00000620507 PLEKHH2Q8IVE3 1493 aa12.15□□□□□ -0.46
RBFOX1-223ENST00000620507 GCC2Q8IWJ2 1684 aa12.15□□□□□ -0.47
RBFOX1-223ENST00000620507 CEP170Q5SW79 1584 aa12.12□□□□□ -0.47
RBFOX1-223ENST00000620507 KDM6BO15054 1643 aa12.12□□□□□ -0.47
RBFOX1-223ENST00000620507 PDE3BQ13370 1112 aa12.12□□□□□ -0.47
RBFOX1-223ENST00000620507 PZPP20742 1482 aa12.12□□□□□ -0.47
RBFOX1-223ENST00000620507 PNISRQ8TF01 805 aaKnown RBP12.12□□□□□ -0.47
RBFOX1-223ENST00000620507 EIF3AQ14152 1382 aaKnown RBP12.11□□□□□ -0.47
RBFOX1-223ENST00000620507 ZBTB47Q9UFB7 747 aaPredicted RBP12.11□□□□□ -0.47
RBFOX1-223ENST00000620507 BRD4O60885 1362 aaPredicted RBP12.11□□□□□ -0.47
RBFOX1-223ENST00000620507 TNNT2P45379 298 aaPredicted RBP12.1□□□□□ -0.47
RBFOX1-223ENST00000620507 ESF1Q9H501 851 aaKnown RBP12.1□□□□□ -0.47
RBFOX1-223ENST00000620507 NEFMP07197 916 aa12.1□□□□□ -0.47
RBFOX1-223ENST00000620507 TEX14Q8IWB6 1497 aa12.09□□□□□ -0.47
RBFOX1-223ENST00000620507 STAC3Q96MF2 364 aa12.08□□□□□ -0.47
RBFOX1-223ENST00000620507 ADGRL2O95490 1459 aa12.08□□□□□ -0.48
RBFOX1-223ENST00000620507 NEUROD2Q15784 382 aa12.08□□□□□ -0.48
RBFOX1-223ENST00000620507 LRRIQ1Q96JM4 1722 aa12.08□□□□□ -0.48
RBFOX1-223ENST00000620507 CFAP53Q96M91 514 aa12.07□□□□□ -0.48
RBFOX1-223ENST00000620507 WASHC2CQ9Y4E1 1318 aa12.07□□□□□ -0.48
RBFOX1-223ENST00000620507 SHANK2Q9UPX8 1470 aa12.06□□□□□ -0.48
RBFOX1-223ENST00000620507 NBR1Q14596 966 aa12.06□□□□□ -0.48
RBFOX1-223ENST00000620507 MORC1Q86VD1 984 aa12.05□□□□□ -0.48
RBFOX1-223ENST00000620507 OSCARQ8IYS5 282 aa12.05□□□□□ -0.48
RBFOX1-223ENST00000620507 RRP1P56182 461 aaKnown RBP12.04□□□□□ -0.48
RBFOX1-223ENST00000620507 TRAK1Q9UPV9 953 aa12.04□□□□□ -0.48
RBFOX1-223ENST00000620507 SAFB2Q14151 953 aaKnown RBP eCLIP12.04□□□□□ -0.48
RBFOX1-223ENST00000620507 RALGAPBQ86X10 1494 aa12.03□□□□□ -0.48
RBFOX1-223ENST00000620507 SCAPERQ9BY12 1400 aa12.03□□□□□ -0.48
RBFOX1-223ENST00000620507 SYCP2Q9BX26 1530 aa12.03□□□□□ -0.48
RBFOX1-223ENST00000620507 GOLGA2Q08379 1002 aa12.02□□□□□ -0.48
RBFOX1-223ENST00000620507 POGKQ9P215 609 aa12.02□□□□□ -0.48
RBFOX1-223ENST00000620507 SMG6Q86US8 1419 aaKnown RBP12.02□□□□□ -0.48
RBFOX1-223ENST00000620507 EXOC6Q8TAG9 804 aa12.02□□□□□ -0.49
RBFOX1-223ENST00000620507 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.49
RBFOX1-223ENST00000620507 NUTM2DQ5VT03 806 aaPredicted RBP12.02□□□□□ -0.49
RBFOX1-223ENST00000620507 CCDC146Q8IYE0 955 aa12.02□□□□□ -0.49
RBFOX1-223ENST00000620507 ERBINQ96RT1 1412 aa12.01□□□□□ -0.49
RBFOX1-223ENST00000620507 FAM135AQ9P2D6 1515 aa12.01□□□□□ -0.49
RBFOX1-223ENST00000620507 CFAP70Q5T0N1 1121 aa12.01□□□□□ -0.49
RBFOX1-223ENST00000620507 NOP58Q9Y2X3 529 aaKnown RBP12.01□□□□□ -0.49
RBFOX1-223ENST00000620507 SPATA31E1Q6ZUB1 1445 aa12.01□□□□□ -0.49
RBFOX1-223ENST00000620507 STK26Q9P289 416 aa12.01□□□□□ -0.49
RBFOX1-223ENST00000620507 ABCC10Q5T3U5 1492 aa12□□□□□ -0.49
RBFOX1-223ENST00000620507 PLIN1O60240 522 aa12□□□□□ -0.49
RBFOX1-223ENST00000620507 SRPK2P78362 688 aaKnown RBP12□□□□□ -0.49
RBFOX1-223ENST00000620507 ABCA8O94911 1581 aa12□□□□□ -0.49
RBFOX1-223ENST00000620507 PLCH2O75038 1416 aa11.99□□□□□ -0.49
RBFOX1-223ENST00000620507 CDCA7LQ96GN5 454 aa11.99□□□□□ -0.49
RBFOX1-223ENST00000620507 ADAMTS8Q9UP79 889 aa11.99□□□□□ -0.49
RBFOX1-223ENST00000620507 ADGBQ8N7X0 1667 aa11.99□□□□□ -0.49
RBFOX1-223ENST00000620507 FANCIQ9NVI1 1328 aa11.99□□□□□ -0.49
RBFOX1-223ENST00000620507 ARHGEF12Q9NZN5 1544 aa11.98□□□□□ -0.49
RBFOX1-223ENST00000620507 FRAT1Q92837 279 aaPredicted RBP11.98□□□□□ -0.49
RBFOX1-223ENST00000620507 UHRF1BP1Q6BDS2 1440 aa11.98□□□□□ -0.49
RBFOX1-223ENST00000620507 TCERG1O14776 1098 aaKnown RBP11.98□□□□□ -0.49
RBFOX1-223ENST00000620507 DHX29Q7Z478 1369 aaKnown RBP11.98□□□□□ -0.49
RBFOX1-223ENST00000620507 PRAG1Q86YV5 1406 aa11.97□□□□□ -0.49
RBFOX1-223ENST00000620507 U2SURPO15042 1029 aaKnown RBP11.96□□□□□ -0.49
RBFOX1-223ENST00000620507 PPP2R1AP30153 589 aa11.96□□□□□ -0.49
RBFOX1-223ENST00000620507 RGS3P49796 1198 aa11.96□□□□□ -0.49
RBFOX1-223ENST00000620507 MBD5Q9P267 1494 aa11.96□□□□□ -0.49
RBFOX1-223ENST00000620507 VGFO15240 615 aaPredicted RBP11.96□□□□□ -0.5
RBFOX1-223ENST00000620507 PPM1GO15355 546 aaPredicted RBP11.96□□□□□ -0.5
RBFOX1-223ENST00000620507 CENPJQ9HC77 1338 aaPredicted RBP11.96□□□□□ -0.5
RBFOX1-223ENST00000620507 APAF1O14727 1248 aa11.95□□□□□ -0.5
RBFOX1-223ENST00000620507 DUOX2Q9NRD8 1548 aa11.95□□□□□ -0.5
RBFOX1-223ENST00000620507 KDM5BQ9UGL1 1544 aa11.95□□□□□ -0.5
RBFOX1-223ENST00000620507 MAPK8IP3Q9UPT6 1336 aa11.94□□□□□ -0.5
RBFOX1-223ENST00000620507 ABCC2Q92887 1545 aa11.94□□□□□ -0.5
RBFOX1-223ENST00000620507 TRAPPC8Q9Y2L5 1435 aa11.94□□□□□ -0.5
RBFOX1-223ENST00000620507 DISP3Q9P2K9 1392 aa11.94□□□□□ -0.5
RBFOX1-223ENST00000620507 MLECQ14165 292 aa11.94□□□□□ -0.5
RBFOX1-223ENST00000620507 U2AF1L5P0DN76 240 aaPredicted RBP11.94□□□□□ -0.5
RBFOX1-223ENST00000620507 U2AF1Q01081 240 aaKnown RBP eCLIP11.94□□□□□ -0.5
RBFOX1-223ENST00000620507 DDRGK1Q96HY6 314 aa11.94□□□□□ -0.5
RBFOX1-223ENST00000620507 CRBNQ96SW2 442 aa11.94□□□□□ -0.5
RBFOX1-223ENST00000620507 UPF2Q9HAU5 1272 aaKnown RBP11.94□□□□□ -0.5
RBFOX1-223ENST00000620507 EIF5BO60841 1220 aaKnown RBP11.93□□□□□ -0.5
RBFOX1-223ENST00000620507 TMEM132EQ6IEE7 984 aa11.93□□□□□ -0.5
RBFOX1-223ENST00000620507 PLPPR3Q6T4P5 718 aa11.93□□□□□ -0.5
RBFOX1-223ENST00000620507 FANCAO15360 1455 aa11.92□□□□□ -0.5
RBFOX1-223ENST00000620507 ARHGEF5Q12774 1597 aa11.92□□□□□ -0.5
RBFOX1-223ENST00000620507 ADGRL1O94910 1474 aa11.92□□□□□ -0.5
RBFOX1-223ENST00000620507 TESK2Q96S53 571 aa11.92□□□□□ -0.5
RBFOX1-223ENST00000620507 CYB5RLQ6IPT4 315 aa11.91□□□□□ -0.5
RBFOX1-223ENST00000620507 EVC2Q86UK5 1308 aa11.91□□□□□ -0.5
RBFOX1-223ENST00000620507 FTSJ3Q8IY81 847 aaKnown RBP11.91□□□□□ -0.5
RBFOX1-223ENST00000620507 IPO9Q96P70 1041 aaKnown RBP11.9□□□□□ -0.5
RBFOX1-223ENST00000620507 CGNL1Q0VF96 1302 aa11.9□□□□□ -0.5
RBFOX1-223ENST00000620507 ADCY10Q96PN6 1610 aa11.9□□□□□ -0.5
RBFOX1-223ENST00000620507 E9PSI1 815 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms