RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 CCDC144AA2RUR9 1427 aa26.74■■□□□ 1.87
LAPTM4B-204ENST00000619747 BCANQ96GW7 911 aa26.74■■□□□ 1.87
LAPTM4B-204ENST00000619747 NPM1P06748 294 aaKnown RBP eCLIP26.74■■□□□ 1.87
LAPTM4B-204ENST00000619747 CNTLNQ9NXG0 1405 aa26.73■■□□□ 1.87
LAPTM4B-204ENST00000619747 ABCC1P33527 1531 aa26.71■■□□□ 1.87
LAPTM4B-204ENST00000619747 MAST1Q9Y2H9 1570 aa26.71■■□□□ 1.87
LAPTM4B-204ENST00000619747 ASXL2Q76L83 1435 aa26.71■■□□□ 1.87
LAPTM4B-204ENST00000619747 ST20-MTHFSA0A0A6YYL1 179 aa26.69■■□□□ 1.86
LAPTM4B-204ENST00000619747 PLA2R1Q13018 1463 aa26.69■■□□□ 1.86
LAPTM4B-204ENST00000619747 FANCAO15360 1455 aa26.69■■□□□ 1.86
LAPTM4B-204ENST00000619747 DUOX2Q9NRD8 1548 aa26.68■■□□□ 1.86
LAPTM4B-204ENST00000619747 RBM19Q9Y4C8 960 aaKnown RBP26.67■■□□□ 1.86
LAPTM4B-204ENST00000619747 PRKRIP1Q9H875 184 aaPredicted RBP26.67■■□□□ 1.86
LAPTM4B-204ENST00000619747 NBPF1Q3BBV0 1214 aa26.66■■□□□ 1.86
LAPTM4B-204ENST00000619747 PLXNC1O60486 1568 aa26.65■■□□□ 1.86
LAPTM4B-204ENST00000619747 SCAPERQ9BY12 1400 aa26.65■■□□□ 1.86
LAPTM4B-204ENST00000619747 HNRNPUQ00839 825 aaKnown RBP eCLIP26.65■■□□□ 1.86
LAPTM4B-204ENST00000619747 KIF3BO15066 747 aa26.63■■□□□ 1.85
LAPTM4B-204ENST00000619747 ROCK2O75116 1388 aaKnown RBP26.63■■□□□ 1.85
LAPTM4B-204ENST00000619747 FAM9BQ8IZU0 186 aa26.62■■□□□ 1.85
LAPTM4B-204ENST00000619747 UHRF1BP1Q6BDS2 1440 aa26.62■■□□□ 1.85
LAPTM4B-204ENST00000619747 ERBINQ96RT1 1412 aa26.61■■□□□ 1.85
LAPTM4B-204ENST00000619747 UNC13BO14795 1591 aa26.61■■□□□ 1.85
LAPTM4B-204ENST00000619747 BCORL1Q5H9F3 1711 aa26.6■■□□□ 1.85
LAPTM4B-204ENST00000619747 ADGRL1O94910 1474 aa26.59■■□□□ 1.85
LAPTM4B-204ENST00000619747 MRS2Q9HD23 443 aa26.59■■□□□ 1.85
LAPTM4B-204ENST00000619747 RALGAPBQ86X10 1494 aa26.58■■□□□ 1.85
LAPTM4B-204ENST00000619747 KDM5CP41229 1560 aa26.56■■□□□ 1.84
LAPTM4B-204ENST00000619747 IQGAP3Q86VI3 1631 aa26.54■■□□□ 1.84
LAPTM4B-204ENST00000619747 MSH5O43196 834 aa26.54■■□□□ 1.84
LAPTM4B-204ENST00000619747 ZFYVE16Q7Z3T8 1539 aa26.54■■□□□ 1.84
LAPTM4B-204ENST00000619747 ANO8Q9HCE9 1232 aaPredicted RBP26.53■■□□□ 1.84
LAPTM4B-204ENST00000619747 A2MP01023 1474 aa26.52■■□□□ 1.84
LAPTM4B-204ENST00000619747 PRAG1Q86YV5 1406 aa26.51■■□□□ 1.83
LAPTM4B-204ENST00000619747 ABCA9Q8IUA7 1624 aa26.51■■□□□ 1.83
LAPTM4B-204ENST00000619747 RTEL1-TNFRSF6BF6WH68 1400 aa26.51■■□□□ 1.83
LAPTM4B-204ENST00000619747 FKBP8Q14318 412 aa26.49■■□□□ 1.83
LAPTM4B-204ENST00000619747 ARAP3Q8WWN8 1544 aa26.49■■□□□ 1.83
LAPTM4B-204ENST00000619747 SENP3-EIF4A1A0A087X0R7 540 aa26.49■■□□□ 1.83
LAPTM4B-204ENST00000619747 CYB5RLQ6IPT4 315 aa26.48■■□□□ 1.83
LAPTM4B-204ENST00000619747 ATP7AQ04656 1500 aa26.48■■□□□ 1.83
LAPTM4B-204ENST00000619747 MAGI2Q86UL8 1455 aa26.47■■□□□ 1.83
LAPTM4B-204ENST00000619747 CD109Q6YHK3 1445 aa26.46■■□□□ 1.83
LAPTM4B-204ENST00000619747 DHX29Q7Z478 1369 aaKnown RBP26.44■■□□□ 1.82
LAPTM4B-204ENST00000619747 RAPGEF3O95398 923 aa26.42■■□□□ 1.82
LAPTM4B-204ENST00000619747 POLR1AO95602 1720 aaPredicted RBP26.42■■□□□ 1.82
LAPTM4B-204ENST00000619747 KANK1Q14678 1352 aa26.41■■□□□ 1.82
LAPTM4B-204ENST00000619747 GGT6Q6P531 493 aa26.41■■□□□ 1.82
LAPTM4B-204ENST00000619747 E9PCH4 1651 aa26.39■■□□□ 1.82
LAPTM4B-204ENST00000619747 ATP10AO60312 1499 aa26.38■■□□□ 1.81
LAPTM4B-204ENST00000619747 ARID4BQ4LE39 1312 aaPredicted RBP26.37■■□□□ 1.81
LAPTM4B-204ENST00000619747 INO80Q9ULG1 1556 aaPredicted RBP26.37■■□□□ 1.81
LAPTM4B-204ENST00000619747 TRPM1Q7Z4N2 1603 aa26.36■■□□□ 1.81
LAPTM4B-204ENST00000619747 NEFLP07196 543 aa26.34■■□□□ 1.81
LAPTM4B-204ENST00000619747 CHGAP10645 457 aaKnown RBP26.33■■□□□ 1.81
LAPTM4B-204ENST00000619747 TESK2Q96S53 571 aa26.32■■□□□ 1.8
LAPTM4B-204ENST00000619747 ZNF518AQ6AHZ1 1483 aa26.32■■□□□ 1.8
LAPTM4B-204ENST00000619747 IRX6P78412 446 aaPredicted RBP26.31■■□□□ 1.8
LAPTM4B-204ENST00000619747 KIDINS220Q9ULH0 1771 aa26.3■■□□□ 1.8
LAPTM4B-204ENST00000619747 DISP3Q9P2K9 1392 aa26.3■■□□□ 1.8
LAPTM4B-204ENST00000619747 UGGT1Q9NYU2 1555 aa26.29■■□□□ 1.8
LAPTM4B-204ENST00000619747 GPRASP1Q5JY77 1395 aa26.28■■□□□ 1.8
LAPTM4B-204ENST00000619747 TMC1Q8TDI8 760 aa26.28■■□□□ 1.8
LAPTM4B-204ENST00000619747 CFAP65Q6ZU64 1925 aaKnown RBP26.27■■□□□ 1.8
LAPTM4B-204ENST00000619747 DEKP35659 375 aaKnown RBP26.26■■□□□ 1.79
LAPTM4B-204ENST00000619747 PTPRTO14522 1441 aa26.26■■□□□ 1.79
LAPTM4B-204ENST00000619747 DEPDC5O75140 1603 aa26.25■■□□□ 1.79
LAPTM4B-204ENST00000619747 CLTCL1P53675 1640 aa26.25■■□□□ 1.79
LAPTM4B-204ENST00000619747 TRPM2O94759 1503 aa26.24■■□□□ 1.79
LAPTM4B-204ENST00000619747 POGZQ7Z3K3 1410 aa26.24■■□□□ 1.79
LAPTM4B-204ENST00000619747 CC2D1BQ5T0F9 858 aaKnown RBP26.24■■□□□ 1.79
LAPTM4B-204ENST00000619747 SPHKAPQ2M3C7 1700 aa26.23■■□□□ 1.79
LAPTM4B-204ENST00000619747 TMF1P82094 1093 aa26.22■■□□□ 1.79
LAPTM4B-204ENST00000619747 TET3O43151 1660 aa26.22■■□□□ 1.79
LAPTM4B-204ENST00000619747 WASHC2CQ9Y4E1 1318 aa26.22■■□□□ 1.79
LAPTM4B-204ENST00000619747 CFAP70Q5T0N1 1121 aa26.22■■□□□ 1.79
LAPTM4B-204ENST00000619747 PANK3Q9H999 370 aa26.22■■□□□ 1.79
LAPTM4B-204ENST00000619747 SENP3Q9H4L4 574 aaPredicted RBP26.21■■□□□ 1.79
LAPTM4B-204ENST00000619747 MROH1Q8NDA8 1641 aa26.21■■□□□ 1.79
LAPTM4B-204ENST00000619747 ADGRF5Q8IZF2 1346 aa26.2■■□□□ 1.78
LAPTM4B-204ENST00000619747 PRDM15P57071 1507 aaPredicted RBP26.19■■□□□ 1.78
LAPTM4B-204ENST00000619747 VWDEQ8N2E2 1590 aa26.18■■□□□ 1.78
LAPTM4B-204ENST00000619747 SALL2Q9Y467 1007 aaPredicted RBP26.17■■□□□ 1.78
LAPTM4B-204ENST00000619747 PER1O15534 1290 aaPredicted RBP26.16■■□□□ 1.78
LAPTM4B-204ENST00000619747 PNISRQ8TF01 805 aaKnown RBP26.16■■□□□ 1.78
LAPTM4B-204ENST00000619747 EIF2AK4Q9P2K8 1649 aaKnown RBP26.15■■□□□ 1.78
LAPTM4B-204ENST00000619747 FAM69CQ0P6D2 419 aa26.15■■□□□ 1.78
LAPTM4B-204ENST00000619747 NUTM2DQ5VT03 806 aaPredicted RBP26.15■■□□□ 1.78
LAPTM4B-204ENST00000619747 ZBED9Q6R2W3 1325 aa26.15■■□□□ 1.78
LAPTM4B-204ENST00000619747 COL17A1Q9UMD9 1497 aaPredicted RBP26.13■■□□□ 1.77
LAPTM4B-204ENST00000619747 MYBBP1AQ9BQG0 1328 aaKnown RBP26.13■■□□□ 1.77
LAPTM4B-204ENST00000619747 CEP152O94986 1710 aa26.12■■□□□ 1.77
LAPTM4B-204ENST00000619747 MADDQ8WXG6 1647 aa26.12■■□□□ 1.77
LAPTM4B-204ENST00000619747 RALBP1Q15311 655 aa26.12■■□□□ 1.77
LAPTM4B-204ENST00000619747 MLH3Q9UHC1 1453 aa26.12■■□□□ 1.77
LAPTM4B-204ENST00000619747 PPRC1Q5VV67 1664 aaKnown RBP26.11■■□□□ 1.77
LAPTM4B-204ENST00000619747 FRMPD1Q5SYB0 1578 aa26.1■■□□□ 1.77
LAPTM4B-204ENST00000619747 EFCAB6Q5THR3 1501 aa26.1■■□□□ 1.77
LAPTM4B-204ENST00000619747 KTN1Q86UP2 1357 aaKnown RBP26.1■■□□□ 1.77
LAPTM4B-204ENST00000619747 NPATQ14207 1427 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms