RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 KIAA2012Q0VF49 1180 aa25.3■■□□□ 1.64
FGFR1-241ENST00000619564 HSP90B1P14625 803 aaKnown RBP25.29■■□□□ 1.64
FGFR1-241ENST00000619564 TCERG1O14776 1098 aaKnown RBP25.29■■□□□ 1.64
FGFR1-241ENST00000619564 PHLDB1Q86UU1 1377 aa25.28■■□□□ 1.64
FGFR1-241ENST00000619564 VGFO15240 615 aaPredicted RBP25.27■■□□□ 1.64
FGFR1-241ENST00000619564 CLUAP1Q96AJ1 413 aa25.27■■□□□ 1.64
FGFR1-241ENST00000619564 CCDC34Q96HJ3 373 aa25.27■■□□□ 1.64
FGFR1-241ENST00000619564 FRAT2O75474 233 aaPredicted RBP25.26■■□□□ 1.63
FGFR1-241ENST00000619564 PDE3BQ13370 1112 aa25.26■■□□□ 1.63
FGFR1-241ENST00000619564 PTPRGP23470 1445 aa25.25■■□□□ 1.63
FGFR1-241ENST00000619564 MFAP1P55081 439 aaKnown RBP25.25■■□□□ 1.63
FGFR1-241ENST00000619564 COG3Q96JB2 828 aa25.24■■□□□ 1.63
FGFR1-241ENST00000619564 RTN4Q9NQC3 1192 aaKnown RBP25.24■■□□□ 1.63
FGFR1-241ENST00000619564 SYAP1Q96A49 352 aaPredicted RBP25.24■■□□□ 1.63
FGFR1-241ENST00000619564 C1orf141Q5JVX7 400 aa25.22■■□□□ 1.63
FGFR1-241ENST00000619564 KIF15Q9NS87 1388 aa25.22■■□□□ 1.63
FGFR1-241ENST00000619564 CYB5RLQ6IPT4 315 aa25.21■■□□□ 1.63
FGFR1-241ENST00000619564 WIZO95785 1651 aa25.21■■□□□ 1.63
FGFR1-241ENST00000619564 TPM4P67936 248 aa25.2■■□□□ 1.63
FGFR1-241ENST00000619564 EVC2Q86UK5 1308 aa25.2■■□□□ 1.63
FGFR1-241ENST00000619564 EVA1CP58658 441 aa25.2■■□□□ 1.62
FGFR1-241ENST00000619564 SLKQ9H2G2 1235 aaPredicted RBP25.19■■□□□ 1.62
FGFR1-241ENST00000619564 TOMM22Q9NS69 142 aa25.19■■□□□ 1.62
FGFR1-241ENST00000619564 CGNL1Q0VF96 1302 aa25.18■■□□□ 1.62
FGFR1-241ENST00000619564 RASSF8Q8NHQ8 419 aa25.17■■□□□ 1.62
FGFR1-241ENST00000619564 ST20-MTHFSA0A0A6YYL1 179 aa25.17■■□□□ 1.62
FGFR1-241ENST00000619564 PANK3Q9H999 370 aa25.16■■□□□ 1.62
FGFR1-241ENST00000619564 OSCARQ8IYS5 282 aa25.16■■□□□ 1.62
FGFR1-241ENST00000619564 MYBBP1AQ9BQG0 1328 aaKnown RBP25.16■■□□□ 1.62
FGFR1-241ENST00000619564 CSPP1Q1MSJ5 1256 aa25.15■■□□□ 1.62
FGFR1-241ENST00000619564 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
FGFR1-241ENST00000619564 RBM19Q9Y4C8 960 aaKnown RBP25.14■■□□□ 1.62
FGFR1-241ENST00000619564 RRP7AQ9Y3A4 280 aaKnown RBP25.14■■□□□ 1.62
FGFR1-241ENST00000619564 ATAD2BQ9ULI0 1458 aa25.14■■□□□ 1.61
FGFR1-241ENST00000619564 TEFQ10587 303 aa25.13■■□□□ 1.61
FGFR1-241ENST00000619564 KIF3AQ9Y496 699 aa25.12■■□□□ 1.61
FGFR1-241ENST00000619564 MINK1Q8N4C8 1332 aaPredicted RBP25.1■■□□□ 1.61
FGFR1-241ENST00000619564 NOL8Q76FK4 1167 aaKnown RBP25.09■■□□□ 1.61
FGFR1-241ENST00000619564 TTC5Q8N0Z6 440 aa25.09■■□□□ 1.61
FGFR1-241ENST00000619564 GZF1Q9H116 711 aaPredicted RBP25.09■■□□□ 1.61
FGFR1-241ENST00000619564 KIF16BQ96L93 1317 aa25.09■■□□□ 1.61
FGFR1-241ENST00000619564 ST18O60284 1047 aa25.08■■□□□ 1.61
FGFR1-241ENST00000619564 ELL2O00472 640 aaPredicted RBP25.07■■□□□ 1.6
FGFR1-241ENST00000619564 MARCH6O60337 910 aa25.07■■□□□ 1.6
FGFR1-241ENST00000619564 NOC3LQ8WTT2 800 aaKnown RBP25.06■■□□□ 1.6
FGFR1-241ENST00000619564 NEXNQ0ZGT2 675 aa25.05■■□□□ 1.6
FGFR1-241ENST00000619564 MSH5O43196 834 aa25.05■■□□□ 1.6
FGFR1-241ENST00000619564 VPS53Q5VIR6 699 aa25.03■■□□□ 1.6
FGFR1-241ENST00000619564 E9PSI1 815 aa25.02■■□□□ 1.6
FGFR1-241ENST00000619564 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.02■■□□□ 1.6
FGFR1-241ENST00000619564 PSME1Q06323 249 aa25.01■■□□□ 1.59
FGFR1-241ENST00000619564 ZKSCAN2Q63HK3 967 aa25.01■■□□□ 1.59
FGFR1-241ENST00000619564 RILPL2Q969X0 211 aa25■■□□□ 1.59
FGFR1-241ENST00000619564 SF3A1Q15459 793 aaKnown RBP25■■□□□ 1.59
FGFR1-241ENST00000619564 CHMP4CQ96CF2 233 aa25■■□□□ 1.59
FGFR1-241ENST00000619564 DEKP35659 375 aaKnown RBP25■■□□□ 1.59
FGFR1-241ENST00000619564 FOXD4L1Q9NU39 408 aa24.99■■□□□ 1.59
FGFR1-241ENST00000619564 LRRFIP1Q32MZ4 808 aaKnown RBP24.99■■□□□ 1.59
FGFR1-241ENST00000619564 CREBRFQ8IUR6 639 aa24.97■■□□□ 1.59
FGFR1-241ENST00000619564 BCL2L13Q9BXK5 485 aa24.97■■□□□ 1.59
FGFR1-241ENST00000619564 USP47Q96K76 1375 aa24.97■■□□□ 1.59
FGFR1-241ENST00000619564 NGEFQ8N5V2 710 aa24.97■■□□□ 1.59
FGFR1-241ENST00000619564 DIAPH1O60610 1272 aaKnown RBP24.97■■□□□ 1.59
FGFR1-241ENST00000619564 EIF2S2P20042 333 aaKnown RBP24.97■■□□□ 1.59
FGFR1-241ENST00000619564 ANKRD45Q5TZF3 282 aa24.96■■□□□ 1.59
FGFR1-241ENST00000619564 FAM69CQ0P6D2 419 aa24.96■■□□□ 1.59
FGFR1-241ENST00000619564 MEX3CQ5U5Q3 659 aaKnown RBP24.96■■□□□ 1.59
FGFR1-241ENST00000619564 NOL10Q9BSC4 688 aaKnown RBP24.96■■□□□ 1.59
FGFR1-241ENST00000619564 C9orf78Q9NZ63 289 aaPredicted RBP24.96■■□□□ 1.59
FGFR1-241ENST00000619564 AKAP17AQ02040 695 aaKnown RBP24.95■■□□□ 1.58
FGFR1-241ENST00000619564 SMARCA4P51532 1647 aa24.95■■□□□ 1.58
FGFR1-241ENST00000619564 H3BQV1 296 aa24.94■■□□□ 1.58
FGFR1-241ENST00000619564 IFFO2Q5TF58 517 aa24.94■■□□□ 1.58
FGFR1-241ENST00000619564 AMOTL1Q8IY63 956 aa24.94■■□□□ 1.58
FGFR1-241ENST00000619564 PHF14O94880 888 aa24.94■■□□□ 1.58
FGFR1-241ENST00000619564 GOLGA6L3A6NEY3 463 aa24.93■■□□□ 1.58
FGFR1-241ENST00000619564 SYTL4Q96C24 671 aaPredicted RBP24.92■■□□□ 1.58
FGFR1-241ENST00000619564 SYNE3Q6ZMZ3 975 aa24.92■■□□□ 1.58
FGFR1-241ENST00000619564 CENPQQ7L2Z9 268 aaPredicted RBP24.92■■□□□ 1.58
FGFR1-241ENST00000619564 FAM184AQ8NB25 1140 aa24.92■■□□□ 1.58
FGFR1-241ENST00000619564 DDX58O95786 925 aaKnown RBP24.92■■□□□ 1.58
FGFR1-241ENST00000619564 GAPVD1Q14C86 1478 aa24.91■■□□□ 1.58
FGFR1-241ENST00000619564 DIAPH3Q9NSV4 1193 aa24.91■■□□□ 1.58
FGFR1-241ENST00000619564 TRIM34Q9BYJ4 488 aa24.9■■□□□ 1.58
FGFR1-241ENST00000619564 MYOM3Q5VTT5 1437 aa24.9■■□□□ 1.58
FGFR1-241ENST00000619564 IPO9Q96P70 1041 aaKnown RBP24.9■■□□□ 1.58
FGFR1-241ENST00000619564 CEP89Q96ST8 783 aa24.9■■□□□ 1.58
FGFR1-241ENST00000619564 DHX57Q6P158 1386 aaKnown RBP24.89■■□□□ 1.58
FGFR1-241ENST00000619564 AMER1Q5JTC6 1135 aaPredicted RBP24.88■■□□□ 1.57
FGFR1-241ENST00000619564 AEBP2Q6ZN18 517 aaPredicted RBP24.88■■□□□ 1.57
FGFR1-241ENST00000619564 ATF3P18847 181 aa24.88■■□□□ 1.57
FGFR1-241ENST00000619564 RUFY2Q8WXA3 655 aa24.88■■□□□ 1.57
FGFR1-241ENST00000619564 PRKRIP1Q9H875 184 aaPredicted RBP24.87■■□□□ 1.57
FGFR1-241ENST00000619564 PRM3Q9NNZ6 103 aa24.87■■□□□ 1.57
FGFR1-241ENST00000619564 APAF1O14727 1248 aa24.87■■□□□ 1.57
FGFR1-241ENST00000619564 FOXD4L5Q5VV16 416 aaPredicted RBP24.87■■□□□ 1.57
FGFR1-241ENST00000619564 FOXD4L4Q8WXT5 416 aaPredicted RBP24.87■■□□□ 1.57
FGFR1-241ENST00000619564 CPLX2Q6PUV4 134 aaKnown RBP24.86■■□□□ 1.57
FGFR1-241ENST00000619564 API5Q9BZZ5 524 aaKnown RBP24.86■■□□□ 1.57
FGFR1-241ENST00000619564 TPM3P06753 285 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms