RNA–Protein interactions for RNA: ENST00000619199.4

ATP13A3-211, Transcript of ATPase 13A3, humanhuman

TSL 2 BASIC

Gene ATP13A3, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-211ENST00000619199 DCAF8L1A6NGE4 600 aa5.95□□□□□ -1.46
ATP13A3-211ENST00000619199 FRAT1Q92837 279 aaPredicted RBP5.95□□□□□ -1.46
ATP13A3-211ENST00000619199 SPAG9O60271 1321 aaKnown RBP5.95□□□□□ -1.46
ATP13A3-211ENST00000619199 HMGB1P09429 215 aaKnown RBP5.94□□□□□ -1.46
ATP13A3-211ENST00000619199 ACBD3Q9H3P7 528 aa5.94□□□□□ -1.46
ATP13A3-211ENST00000619199 ATP6V1DQ9Y5K8 247 aa5.94□□□□□ -1.46
ATP13A3-211ENST00000619199 U2SURPO15042 1029 aaKnown RBP5.94□□□□□ -1.46
ATP13A3-211ENST00000619199 TPD52L1Q16890 204 aaPredicted RBP5.94□□□□□ -1.46
ATP13A3-211ENST00000619199 RWDD1Q9H446 243 aaPredicted RBP5.94□□□□□ -1.46
ATP13A3-211ENST00000619199 CPLX2Q6PUV4 134 aaKnown RBP5.94□□□□□ -1.46
ATP13A3-211ENST00000619199 AEBP2Q6ZN18 517 aaPredicted RBP5.94□□□□□ -1.46
ATP13A3-211ENST00000619199 STK31Q9BXU1 1019 aa5.94□□□□□ -1.46
ATP13A3-211ENST00000619199 NOL10Q9BSC4 688 aaKnown RBP5.94□□□□□ -1.46
ATP13A3-211ENST00000619199 LMOD3Q0VAK6 560 aa5.93□□□□□ -1.46
ATP13A3-211ENST00000619199 RGS3P49796 1198 aa5.93□□□□□ -1.46
ATP13A3-211ENST00000619199 AKAP17AQ02040 695 aaKnown RBP5.93□□□□□ -1.46
ATP13A3-211ENST00000619199 DCTN1Q14203 1278 aa5.93□□□□□ -1.46
ATP13A3-211ENST00000619199 ZRSR2Q15696 482 aaKnown RBP5.93□□□□□ -1.46
ATP13A3-211ENST00000619199 SMC4Q9NTJ3 1288 aa5.93□□□□□ -1.46
ATP13A3-211ENST00000619199 HOOK1Q9UJC3 728 aaKnown RBP5.93□□□□□ -1.46
ATP13A3-211ENST00000619199 MYO6Q9UM54 1294 aa5.93□□□□□ -1.46
ATP13A3-211ENST00000619199 WASHC2CQ9Y4E1 1318 aa5.93□□□□□ -1.46
ATP13A3-211ENST00000619199 ARHGAP35Q9NRY4 1499 aa5.93□□□□□ -1.46
ATP13A3-211ENST00000619199 TEX35Q5T0J7 233 aa5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 SF3A1Q15459 793 aaKnown RBP5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 SYNE3Q6ZMZ3 975 aa5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 IL27Q8NEV9 243 aa5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 PMFBP1Q8TBY8 1022 aa5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 UACAQ9BZF9 1416 aa5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 CSB-PGBD3P0DP91 1061 aa5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 VPS53Q5VIR6 699 aa5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 TRIM34Q9BYJ4 488 aa5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 KIF16BQ96L93 1317 aa5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 RNF123Q5XPI4 1314 aa5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 PEG3Q9GZU2 1588 aa5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 NOM1Q5C9Z4 860 aaKnown RBP5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 AK7Q96M32 723 aa5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 CFDP1Q9UEE9 299 aaPredicted RBP5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 R3HCC1Q9Y3T6 440 aaKnown RBP5.92□□□□□ -1.46
ATP13A3-211ENST00000619199 CCDC191Q8NCU4 936 aa5.91□□□□□ -1.46
ATP13A3-211ENST00000619199 LRRC9Q6ZRR7 1453 aa5.91□□□□□ -1.46
ATP13A3-211ENST00000619199 CCDC173Q0VFZ6 552 aa5.91□□□□□ -1.46
ATP13A3-211ENST00000619199 NEXNQ0ZGT2 675 aa5.91□□□□□ -1.46
ATP13A3-211ENST00000619199 TOP2BQ02880 1626 aa5.91□□□□□ -1.46
ATP13A3-211ENST00000619199 PHLDB1Q86UU1 1377 aa5.91□□□□□ -1.46
ATP13A3-211ENST00000619199 NEUROD2Q15784 382 aa5.91□□□□□ -1.46
ATP13A3-211ENST00000619199 MORC1Q86VD1 984 aa5.91□□□□□ -1.46
ATP13A3-211ENST00000619199 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.91□□□□□ -1.463e-7■■■■■ 61.1
ATP13A3-211ENST00000619199 CNTLNQ9NXG0 1405 aa5.9□□□□□ -1.46
ATP13A3-211ENST00000619199 ST18O60284 1047 aa5.9□□□□□ -1.46
ATP13A3-211ENST00000619199 CWC22Q9HCG8 908 aaKnown RBP5.9□□□□□ -1.46
ATP13A3-211ENST00000619199 TIAM1Q13009 1591 aa5.9□□□□□ -1.47
ATP13A3-211ENST00000619199 HSPA5P11021 654 aaKnown RBP5.9□□□□□ -1.47
ATP13A3-211ENST00000619199 SMG6Q86US8 1419 aaKnown RBP5.9□□□□□ -1.47
ATP13A3-211ENST00000619199 GOLGA6L19H0YKK7 550 aa5.9□□□□□ -1.47
ATP13A3-211ENST00000619199 FRAT2O75474 233 aaPredicted RBP5.9□□□□□ -1.47
ATP13A3-211ENST00000619199 GTF2E1P29083 439 aaPredicted RBP5.9□□□□□ -1.47
ATP13A3-211ENST00000619199 ODF2Q5BJF6 829 aa5.9□□□□□ -1.47
ATP13A3-211ENST00000619199 WWC2Q6AWC2 1192 aa5.9□□□□□ -1.47
ATP13A3-211ENST00000619199 ANKRD18AQ8IVF6 992 aa5.9□□□□□ -1.47
ATP13A3-211ENST00000619199 RGL3Q3MIN7 710 aa5.89□□□□□ -1.47
ATP13A3-211ENST00000619199 CCDC43Q96MW1 224 aaKnown RBP5.89□□□□□ -1.47
ATP13A3-211ENST00000619199 RSPH6AQ9H0K4 717 aa5.89□□□□□ -1.47
ATP13A3-211ENST00000619199 UNC13AQ9UPW8 1703 aa5.89□□□□□ -1.47
ATP13A3-211ENST00000619199 GSE1Q14687 1217 aa5.89□□□□□ -1.47
ATP13A3-211ENST00000619199 SKOR2Q2VWA4 1001 aaPredicted RBP5.89□□□□□ -1.47
ATP13A3-211ENST00000619199 RUFY1Q96T51 708 aa5.89□□□□□ -1.47
ATP13A3-211ENST00000619199 SRPK2P78362 688 aaKnown RBP5.89□□□□□ -1.47
ATP13A3-211ENST00000619199 HFM1A2PYH4 1435 aa5.88□□□□□ -1.47
ATP13A3-211ENST00000619199 FMN1Q68DA7 1419 aa5.88□□□□□ -1.47
ATP13A3-211ENST00000619199 DDX11L8A8MPP1 907 aa5.88□□□□□ -1.47
ATP13A3-211ENST00000619199 TRIM29Q14134 588 aa5.88□□□□□ -1.47
ATP13A3-211ENST00000619199 FOXD1Q16676 465 aa5.88□□□□□ -1.47
ATP13A3-211ENST00000619199 ERCC4Q92889 916 aaPredicted RBP5.88□□□□□ -1.47
ATP13A3-211ENST00000619199 BRD2P25440 801 aaKnown RBP5.88□□□□□ -1.47
ATP13A3-211ENST00000619199 EIF3AQ14152 1382 aaKnown RBP5.88□□□□□ -1.47
ATP13A3-211ENST00000619199 HMGB2P26583 209 aaKnown RBP5.88□□□□□ -1.47
ATP13A3-211ENST00000619199 BECN2A8MW95 431 aa5.88□□□□□ -1.47
ATP13A3-211ENST00000619199 CT47A1Q5JQC4 288 aaPredicted RBP5.88□□□□□ -1.47
ATP13A3-211ENST00000619199 ATAD2BQ9ULI0 1458 aa5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 CCDC7Q96M83 1385 aa5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 CAGE1Q8TC20 777 aa5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 ARGLU1Q9NWB6 273 aaPredicted RBP5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 CCDC18Q5T9S5 1454 aa5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 PES1O00541 588 aaKnown RBP5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 PDE4AP27815 886 aa5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 BACH2Q9BYV9 841 aa5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 H3BQV1 296 aa5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 DHX8Q14562 1220 aaKnown RBP5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 IFFO2Q5TF58 517 aa5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 FAM184AQ8NB25 1140 aa5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 TOMM22Q9NS69 142 aa5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 RRP7BPQ9NSQ0 103 aa5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 CCDC9Q9Y3X0 531 aaKnown RBP5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 NCOA2Q15596 1464 aa5.87□□□□□ -1.47
ATP13A3-211ENST00000619199 RUFY2Q8WXA3 655 aa5.86□□□□□ -1.47
ATP13A3-211ENST00000619199 CREBRFQ8IUR6 639 aa5.86□□□□□ -1.47
ATP13A3-211ENST00000619199 PDE3BQ13370 1112 aa5.86□□□□□ -1.47
ATP13A3-211ENST00000619199 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.86□□□□□ -1.47
ATP13A3-211ENST00000619199 CHMP3Q9Y3E7 222 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms