RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 PCDHGA10Q9Y5H3 936 aa15.06■□□□□ 0
CBWD1-228ENST00000619157 PROX2Q3B8N5 592 aa15.05■□□□□ -0
CBWD1-228ENST00000619157 COL9A1P20849 921 aa15.03■□□□□ -0
CBWD1-228ENST00000619157 BICRAQ9NZM4 1560 aa15.02■□□□□ -0
CBWD1-228ENST00000619157 PPP1R3GB7ZBB8 358 aa15.02■□□□□ -0
CBWD1-228ENST00000619157 TYW1BQ6NUM6 668 aa14.96□□□□□ -0.01
CBWD1-228ENST00000619157 RABGEF1Q9UJ41 708 aa14.96□□□□□ -0.01
CBWD1-228ENST00000619157 A0A0G2JS52 829 aa14.94□□□□□ -0.02
CBWD1-228ENST00000619157 BCAMP50895 628 aa14.94□□□□□ -0.02
CBWD1-228ENST00000619157 IFFO2Q5TF58 517 aa14.94□□□□□ -0.02
CBWD1-228ENST00000619157 PHF14O94880 888 aa14.93□□□□□ -0.02
CBWD1-228ENST00000619157 ANKK1Q8NFD2 765 aa14.93□□□□□ -0.02
CBWD1-228ENST00000619157 FBXW7Q969H0 707 aa14.92□□□□□ -0.02
CBWD1-228ENST00000619157 SCRIBQ14160 1630 aa14.92□□□□□ -0.02
CBWD1-228ENST00000619157 DPYSL4O14531 572 aa14.91□□□□□ -0.02
CBWD1-228ENST00000619157 KIAA1468Q9P260 1216 aa14.89□□□□□ -0.03
CBWD1-228ENST00000619157 RBM33Q96EV2 1170 aaKnown RBP14.87□□□□□ -0.03
CBWD1-228ENST00000619157 SEPT9Q9UHD8 586 aaPredicted RBP14.87□□□□□ -0.03
CBWD1-228ENST00000619157 RGS20O76081 388 aa14.85□□□□□ -0.03
CBWD1-228ENST00000619157 CAMK2BQ13554 666 aa14.85□□□□□ -0.03
CBWD1-228ENST00000619157 C6orf132Q5T0Z8 1188 aa14.85□□□□□ -0.03
CBWD1-228ENST00000619157 IRX2Q9BZI1 471 aaPredicted RBP14.84□□□□□ -0.03
CBWD1-228ENST00000619157 SOWAHBA6NEL2 793 aa14.83□□□□□ -0.04
CBWD1-228ENST00000619157 DDX12PQ92771 950 aa14.83□□□□□ -0.04
CBWD1-228ENST00000619157 ZFRQ96KR1 1074 aaKnown RBP14.83□□□□□ -0.04
CBWD1-228ENST00000619157 EPAS1Q99814 870 aa14.82□□□□□ -0.04
CBWD1-228ENST00000619157 LAPTM4BQ86VI4 370 aa14.81□□□□□ -0.04
CBWD1-228ENST00000619157 WBP1LQ9NX94 342 aa14.8□□□□□ -0.04
CBWD1-228ENST00000619157 ITGBL1O95965 494 aaPredicted RBP14.78□□□□□ -0.04
CBWD1-228ENST00000619157 TRIM6-TRIM34B2RNG4 842 aa14.77□□□□□ -0.05
CBWD1-228ENST00000619157 SHROOM4Q9ULL8 1493 aa14.75□□□□□ -0.05
CBWD1-228ENST00000619157 ONECUT3O60422 494 aaPredicted RBP14.73□□□□□ -0.05
CBWD1-228ENST00000619157 NBR1Q14596 966 aa14.73□□□□□ -0.05
CBWD1-228ENST00000619157 TSR1Q2NL82 804 aaKnown RBP14.73□□□□□ -0.05
CBWD1-228ENST00000619157 FAM98CQ17RN3 349 aaKnown RBP14.72□□□□□ -0.05
CBWD1-228ENST00000619157 MAP3K7O43318 606 aa14.7□□□□□ -0.06
CBWD1-228ENST00000619157 HPS5Q9UPZ3 1129 aa14.7□□□□□ -0.06
CBWD1-228ENST00000619157 LRCH3Q96II8 777 aa14.69□□□□□ -0.06
CBWD1-228ENST00000619157 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.69□□□□□ -0.06
CBWD1-228ENST00000619157 EN1Q05925 392 aaPredicted RBP14.68□□□□□ -0.06
CBWD1-228ENST00000619157 NYAP1Q6ZVC0 841 aa14.68□□□□□ -0.06
CBWD1-228ENST00000619157 TSKSQ9UJT2 592 aa14.68□□□□□ -0.06
CBWD1-228ENST00000619157 KCNC4Q03721 635 aa14.67□□□□□ -0.06
CBWD1-228ENST00000619157 TSR3Q9UJK0 312 aaKnown RBP14.66□□□□□ -0.06
CBWD1-228ENST00000619157 PDIA6Q15084 440 aa14.64□□□□□ -0.07
CBWD1-228ENST00000619157 BBXQ8WY36 941 aaPredicted RBP14.64□□□□□ -0.07
CBWD1-228ENST00000619157 SMAPO00193 183 aa14.62□□□□□ -0.07
CBWD1-228ENST00000619157 PACS2Q86VP3 889 aa14.62□□□□□ -0.07
CBWD1-228ENST00000619157 PRIM1P49642 420 aaKnown RBP14.59□□□□□ -0.07
CBWD1-228ENST00000619157 EIF4G1Q04637 1599 aaKnown RBP14.58□□□□□ -0.08
CBWD1-228ENST00000619157 CDCA7LQ96GN5 454 aa14.57□□□□□ -0.08
CBWD1-228ENST00000619157 FAM198AQ9UFP1 575 aa14.57□□□□□ -0.08
CBWD1-228ENST00000619157 GRXCR2A6NFK2 248 aa14.56□□□□□ -0.08
CBWD1-228ENST00000619157 Q6ZNB5 142 aa14.56□□□□□ -0.08
CBWD1-228ENST00000619157 SAMD7Q7Z3H4 446 aa14.56□□□□□ -0.08
CBWD1-228ENST00000619157 SPDYE16A6NNV3 312 aaPredicted RBP14.55□□□□□ -0.08
CBWD1-228ENST00000619157 C3orf80F5H4A9 247 aa14.55□□□□□ -0.08
CBWD1-228ENST00000619157 PPP4CP60510 307 aa14.55□□□□□ -0.08
CBWD1-228ENST00000619157 CC2D2AQ9P2K1 1620 aa14.54□□□□□ -0.08
CBWD1-228ENST00000619157 PRSS12P56730 875 aa14.53□□□□□ -0.08
CBWD1-228ENST00000619157 SPRYD3Q8NCJ5 442 aa14.53□□□□□ -0.08
CBWD1-228ENST00000619157 E2F4Q16254 413 aa14.51□□□□□ -0.09
CBWD1-228ENST00000619157 CDHR5Q9HBB8 845 aa14.51□□□□□ -0.09
CBWD1-228ENST00000619157 PNMA3Q9UL41 463 aa14.49□□□□□ -0.09
CBWD1-228ENST00000619157 RNF40O75150 1001 aa14.48□□□□□ -0.09
CBWD1-228ENST00000619157 TJAP1Q5JTD0 557 aa14.47□□□□□ -0.09
CBWD1-228ENST00000619157 TATDN2Q93075 761 aa14.47□□□□□ -0.09
CBWD1-228ENST00000619157 NBPF26B4DH59 902 aa14.46□□□□□ -0.09
CBWD1-228ENST00000619157 CECR2Q9BXF3 1484 aa14.44□□□□□ -0.1
CBWD1-228ENST00000619157 CFAP44Q96MT7 982 aa14.44□□□□□ -0.1
CBWD1-228ENST00000619157 MTRQ99707 1265 aa14.44□□□□□ -0.1
CBWD1-228ENST00000619157 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.44□□□□□ -0.1
CBWD1-228ENST00000619157 CERKQ8TCT0 537 aa14.43□□□□□ -0.1
CBWD1-228ENST00000619157 WDR70Q9NW82 654 aa14.43□□□□□ -0.1
CBWD1-228ENST00000619157 OSBPP22059 807 aa14.42□□□□□ -0.1
CBWD1-228ENST00000619157 NUDT18Q6ZVK8 323 aa14.42□□□□□ -0.1
CBWD1-228ENST00000619157 PAXIP1Q6ZW49 1069 aaPredicted RBP14.41□□□□□ -0.1
CBWD1-228ENST00000619157 ZNF516Q92618 1163 aa14.38□□□□□ -0.11
CBWD1-228ENST00000619157 PRKD2Q9BZL6 878 aa14.38□□□□□ -0.11
CBWD1-228ENST00000619157 IL21Q9HBE4 155 aa14.38□□□□□ -0.11
CBWD1-228ENST00000619157 ARIH1Q9Y4X5 557 aaPredicted RBP14.38□□□□□ -0.11
CBWD1-228ENST00000619157 GFRA3O60609 400 aa14.37□□□□□ -0.11
CBWD1-228ENST00000619157 APLP1P51693 650 aa14.37□□□□□ -0.11
CBWD1-228ENST00000619157 LCE2BO14633 110 aa14.36□□□□□ -0.11
CBWD1-228ENST00000619157 PPP1R18Q6NYC8 613 aa14.36□□□□□ -0.11
CBWD1-228ENST00000619157 PADI6Q6TGC4 694 aa14.34□□□□□ -0.11
CBWD1-228ENST00000619157 HDGFP51858 240 aaKnown RBP14.32□□□□□ -0.12
CBWD1-228ENST00000619157 LAPTM4AQ15012 233 aa14.32□□□□□ -0.12
CBWD1-228ENST00000619157 SWT1Q5T5J6 900 aaKnown RBP14.31□□□□□ -0.12
CBWD1-228ENST00000619157 NKX2-3Q8TAU0 364 aa14.31□□□□□ -0.12
CBWD1-228ENST00000619157 RBM27Q9P2N5 1060 aaKnown RBP14.31□□□□□ -0.12
CBWD1-228ENST00000619157 COPS2P61201 443 aa14.29□□□□□ -0.12
CBWD1-228ENST00000619157 NPDC1Q9NQX5 325 aaPredicted RBP14.28□□□□□ -0.12
CBWD1-228ENST00000619157 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.27□□□□□ -0.13
CBWD1-228ENST00000619157 TRAF7Q6Q0C0 670 aa14.26□□□□□ -0.13
CBWD1-228ENST00000619157 TTC13Q8NBP0 860 aa14.26□□□□□ -0.13
CBWD1-228ENST00000619157 SMARCA4P51532 1647 aa14.26□□□□□ -0.13
CBWD1-228ENST00000619157 NRG2O14511 850 aaPredicted RBP14.22□□□□□ -0.13
CBWD1-228ENST00000619157 SLF2Q8IX21 1173 aa14.22□□□□□ -0.13
CBWD1-228ENST00000619157 V9GY48 417 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms