RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 KIAA1107Q9UPP5 1409 aa9.64□□□□□ -0.87
SRGAP3-213ENST00000618999 FANCAO15360 1455 aa9.64□□□□□ -0.87
SRGAP3-213ENST00000618999 MAPKBP1O60336 1514 aa9.64□□□□□ -0.87
SRGAP3-213ENST00000618999 SAMD9LQ8IVG5 1584 aa9.64□□□□□ -0.87
SRGAP3-213ENST00000618999 PREX2Q70Z35 1606 aa9.64□□□□□ -0.87
SRGAP3-213ENST00000618999 SCAPERQ9BY12 1400 aa9.63□□□□□ -0.87
SRGAP3-213ENST00000618999 TRAPPC8Q9Y2L5 1435 aa9.63□□□□□ -0.87
SRGAP3-213ENST00000618999 MYO5CQ9NQX4 1742 aa9.63□□□□□ -0.87
SRGAP3-213ENST00000618999 CDC42BPBQ9Y5S2 1711 aa9.63□□□□□ -0.87
SRGAP3-213ENST00000618999 HIRIP3Q9BW71 556 aaPredicted RBP9.62□□□□□ -0.87
SRGAP3-213ENST00000618999 KDM6BO15054 1643 aa9.62□□□□□ -0.87
SRGAP3-213ENST00000618999 TMEM132AQ24JP5 1023 aa9.62□□□□□ -0.87
SRGAP3-213ENST00000618999 BCL11AQ9H165 835 aa9.62□□□□□ -0.87
SRGAP3-213ENST00000618999 RBM19Q9Y4C8 960 aaKnown RBP9.61□□□□□ -0.87
SRGAP3-213ENST00000618999 ADGRL2O95490 1459 aa9.61□□□□□ -0.87
SRGAP3-213ENST00000618999 RIMBP3CA6NJZ7 1639 aa9.61□□□□□ -0.87
SRGAP3-213ENST00000618999 RIMBP3BA6NNM3 1639 aa9.61□□□□□ -0.87
SRGAP3-213ENST00000618999 RIMBP3Q9UFD9 1639 aa9.61□□□□□ -0.87
SRGAP3-213ENST00000618999 ADGRL1O94910 1474 aa9.61□□□□□ -0.87
SRGAP3-213ENST00000618999 SHANK2Q9UPX8 1470 aa9.61□□□□□ -0.87
SRGAP3-213ENST00000618999 CCER2I3L3R5 266 aa9.61□□□□□ -0.87
SRGAP3-213ENST00000618999 SLC4A2P04920 1241 aa9.61□□□□□ -0.87
SRGAP3-213ENST00000618999 ARHGEF12Q9NZN5 1544 aa9.6□□□□□ -0.87
SRGAP3-213ENST00000618999 DCAF8L1A6NGE4 600 aa9.6□□□□□ -0.87
SRGAP3-213ENST00000618999 RAPGEF3O95398 923 aa9.6□□□□□ -0.87
SRGAP3-213ENST00000618999 ARHGEF5Q12774 1597 aa9.6□□□□□ -0.87
SRGAP3-213ENST00000618999 KIF3BO15066 747 aa9.59□□□□□ -0.87
SRGAP3-213ENST00000618999 PPP1R15AO75807 674 aaPredicted RBP9.59□□□□□ -0.87
SRGAP3-213ENST00000618999 GCC2Q8IWJ2 1684 aa9.59□□□□□ -0.87
SRGAP3-213ENST00000618999 HNRNPUQ00839 825 aaKnown RBP eCLIP9.59□□□□□ -0.87
SRGAP3-213ENST00000618999 ECM2O94769 699 aaPredicted RBP9.58□□□□□ -0.88
SRGAP3-213ENST00000618999 VASPP50552 380 aaPredicted RBP9.58□□□□□ -0.88
SRGAP3-213ENST00000618999 ZNF326Q5BKZ1 582 aaKnown RBP9.58□□□□□ -0.88
SRGAP3-213ENST00000618999 MYCNP04198 464 aaPredicted RBP9.57□□□□□ -0.88
SRGAP3-213ENST00000618999 L3MBTL2Q969R5 705 aa9.57□□□□□ -0.88
SRGAP3-213ENST00000618999 CHGAP10645 457 aaKnown RBP9.56□□□□□ -0.88
SRGAP3-213ENST00000618999 ABCC1P33527 1531 aa9.56□□□□□ -0.88
SRGAP3-213ENST00000618999 ABCA9Q8IUA7 1624 aa9.56□□□□□ -0.88
SRGAP3-213ENST00000618999 ADGBQ8N7X0 1667 aa9.56□□□□□ -0.88
SRGAP3-213ENST00000618999 FBXO3Q9UK99 471 aa9.56□□□□□ -0.88
SRGAP3-213ENST00000618999 GGT6Q6P531 493 aa9.55□□□□□ -0.88
SRGAP3-213ENST00000618999 SPRYD3Q8NCJ5 442 aa9.55□□□□□ -0.88
SRGAP3-213ENST00000618999 ARAP3Q8WWN8 1544 aa9.55□□□□□ -0.88
SRGAP3-213ENST00000618999 ANKRD30BQ9BXX2 1392 aa9.55□□□□□ -0.88
SRGAP3-213ENST00000618999 CROCC2H7BZ55 1655 aa9.54□□□□□ -0.88
SRGAP3-213ENST00000618999 PZPP20742 1482 aa9.54□□□□□ -0.88
SRGAP3-213ENST00000618999 RGL3Q3MIN7 710 aa9.54□□□□□ -0.88
SRGAP3-213ENST00000618999 NPM2Q86SE8 214 aaKnown RBP9.54□□□□□ -0.88
SRGAP3-213ENST00000618999 TRHP20396 242 aaPredicted RBP9.53□□□□□ -0.88
SRGAP3-213ENST00000618999 IRX6P78412 446 aaPredicted RBP9.53□□□□□ -0.88
SRGAP3-213ENST00000618999 RTEL1-TNFRSF6BF6WH68 1400 aa9.53□□□□□ -0.88
SRGAP3-213ENST00000618999 KANK1Q14678 1352 aa9.52□□□□□ -0.88
SRGAP3-213ENST00000618999 DUOX2Q9NRD8 1548 aa9.52□□□□□ -0.89
SRGAP3-213ENST00000618999 IFNLR1Q8IU57 520 aaPredicted RBP9.52□□□□□ -0.89
SRGAP3-213ENST00000618999 ATF5Q9Y2D1 282 aaPredicted RBP9.52□□□□□ -0.89
SRGAP3-213ENST00000618999 DENND4BO75064 1496 aaPredicted RBP9.52□□□□□ -0.89
SRGAP3-213ENST00000618999 ZNF518AQ6AHZ1 1483 aa9.52□□□□□ -0.89
SRGAP3-213ENST00000618999 DHX29Q7Z478 1369 aaKnown RBP9.5□□□□□ -0.89
SRGAP3-213ENST00000618999 ERBINQ96RT1 1412 aa9.5□□□□□ -0.89
SRGAP3-213ENST00000618999 MAST1Q9Y2H9 1570 aa9.5□□□□□ -0.89
SRGAP3-213ENST00000618999 DCAF11Q8TEB1 546 aa9.5□□□□□ -0.89
SRGAP3-213ENST00000618999 ATP7AQ04656 1500 aa9.49□□□□□ -0.89
SRGAP3-213ENST00000618999 NEO1Q92859 1461 aa9.49□□□□□ -0.89
SRGAP3-213ENST00000618999 POGZQ7Z3K3 1410 aa9.49□□□□□ -0.89
SRGAP3-213ENST00000618999 CCDC144AA2RUR9 1427 aa9.48□□□□□ -0.89
SRGAP3-213ENST00000618999 FAM135AQ9P2D6 1515 aa9.48□□□□□ -0.89
SRGAP3-213ENST00000618999 WASHC2CQ9Y4E1 1318 aa9.48□□□□□ -0.89
SRGAP3-213ENST00000618999 RPRD2Q5VT52 1461 aaKnown RBP9.48□□□□□ -0.89
SRGAP3-213ENST00000618999 ZFYVE16Q7Z3T8 1539 aa9.47□□□□□ -0.89
SRGAP3-213ENST00000618999 PLXNC1O60486 1568 aa9.47□□□□□ -0.89
SRGAP3-213ENST00000618999 EIF4G2P78344 907 aaKnown RBP eCLIP9.47□□□□□ -0.89
SRGAP3-213ENST00000618999 MLECQ14165 292 aa9.47□□□□□ -0.89
SRGAP3-213ENST00000618999 A2MP01023 1474 aa9.46□□□□□ -0.89
SRGAP3-213ENST00000618999 NBPF8Q3BBV2 869 aa9.46□□□□□ -0.89
SRGAP3-213ENST00000618999 PPP4R2Q9NY27 417 aa9.46□□□□□ -0.9
SRGAP3-213ENST00000618999 FAM9BQ8IZU0 186 aa9.46□□□□□ -0.9
SRGAP3-213ENST00000618999 CFAP74Q9C0B2 1584 aa9.45□□□□□ -0.9
SRGAP3-213ENST00000618999 SPDYE4A6NLX3 237 aa9.45□□□□□ -0.9
SRGAP3-213ENST00000618999 RTL5Q5HYW3 569 aaPredicted RBP9.45□□□□□ -0.9
SRGAP3-213ENST00000618999 TEX14Q8IWB6 1497 aa9.45□□□□□ -0.9
SRGAP3-213ENST00000618999 TSPOAP1O95153 1857 aa9.45□□□□□ -0.9
SRGAP3-213ENST00000618999 ERICH6BQ5W0A0 696 aa9.44□□□□□ -0.9
SRGAP3-213ENST00000618999 POLR3GLQ9BT43 218 aa9.44□□□□□ -0.9
SRGAP3-213ENST00000618999 MLH3Q9UHC1 1453 aa9.44□□□□□ -0.9
SRGAP3-213ENST00000618999 FANCIQ9NVI1 1328 aa9.44□□□□□ -0.9
SRGAP3-213ENST00000618999 ARID4BQ4LE39 1312 aaPredicted RBP9.44□□□□□ -0.9
SRGAP3-213ENST00000618999 HSPA5P11021 654 aaKnown RBP9.44□□□□□ -0.9
SRGAP3-213ENST00000618999 MRS2Q9HD23 443 aa9.44□□□□□ -0.9
SRGAP3-213ENST00000618999 CNGB1Q14028 1251 aaPredicted RBP9.43□□□□□ -0.9
SRGAP3-213ENST00000618999 ESF1Q9H501 851 aaKnown RBP9.43□□□□□ -0.9
SRGAP3-213ENST00000618999 DIP2BQ9P265 1576 aa9.43□□□□□ -0.9
SRGAP3-213ENST00000618999 GLI2P10070 1586 aa9.43□□□□□ -0.9
SRGAP3-213ENST00000618999 KDM5DQ9BY66 1539 aa9.43□□□□□ -0.9
SRGAP3-213ENST00000618999 CIZ1Q9ULV3 898 aaPredicted RBP9.42□□□□□ -0.9
SRGAP3-213ENST00000618999 CARD11Q9BXL7 1154 aa9.42□□□□□ -0.9
SRGAP3-213ENST00000618999 YEATS2Q9ULM3 1422 aa9.42□□□□□ -0.9
SRGAP3-213ENST00000618999 INO80Q9ULG1 1556 aaPredicted RBP9.41□□□□□ -0.9
SRGAP3-213ENST00000618999 ANP32AP39687 249 aaKnown RBP9.41□□□□□ -0.9
SRGAP3-213ENST00000618999 BBXQ8WY36 941 aaPredicted RBP9.41□□□□□ -0.9
SRGAP3-213ENST00000618999 MAP3K4Q9Y6R4 1608 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms