RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 PPP4R2Q9NY27 417 aa26.26■■□□□ 1.79
PCDHGB3-202ENST00000618934 RSPH4AQ5TD94 716 aa26.25■■□□□ 1.79
PCDHGB3-202ENST00000618934 PLA2R1Q13018 1463 aa26.24■■□□□ 1.79
PCDHGB3-202ENST00000618934 ROCK2O75116 1388 aaKnown RBP26.23■■□□□ 1.79
PCDHGB3-202ENST00000618934 ANP32EQ9BTT0 268 aa26.23■■□□□ 1.79
PCDHGB3-202ENST00000618934 ERICH6BQ5W0A0 696 aa26.23■■□□□ 1.79
PCDHGB3-202ENST00000618934 PNISRQ8TF01 805 aaKnown RBP26.23■■□□□ 1.79
PCDHGB3-202ENST00000618934 SHROOM2Q13796 1616 aa26.22■■□□□ 1.79
PCDHGB3-202ENST00000618934 NBPF1Q3BBV0 1214 aa26.22■■□□□ 1.79
PCDHGB3-202ENST00000618934 B4GALNT3Q6L9W6 998 aa26.22■■□□□ 1.79
PCDHGB3-202ENST00000618934 CCDC144AA2RUR9 1427 aa26.19■■□□□ 1.78
PCDHGB3-202ENST00000618934 PLEKHH2Q8IVE3 1493 aa26.19■■□□□ 1.78
PCDHGB3-202ENST00000618934 PRAG1Q86YV5 1406 aa26.18■■□□□ 1.78
PCDHGB3-202ENST00000618934 TMC1Q8TDI8 760 aa26.18■■□□□ 1.78
PCDHGB3-202ENST00000618934 MAST1Q9Y2H9 1570 aa26.17■■□□□ 1.78
PCDHGB3-202ENST00000618934 SMG6Q86US8 1419 aaKnown RBP26.17■■□□□ 1.78
PCDHGB3-202ENST00000618934 UNC13BO14795 1591 aa26.16■■□□□ 1.78
PCDHGB3-202ENST00000618934 TRPM1Q7Z4N2 1603 aa26.16■■□□□ 1.78
PCDHGB3-202ENST00000618934 ABCC2Q92887 1545 aa26.15■■□□□ 1.78
PCDHGB3-202ENST00000618934 MYO5CQ9NQX4 1742 aa26.14■■□□□ 1.77
PCDHGB3-202ENST00000618934 A2MP01023 1474 aa26.13■■□□□ 1.77
PCDHGB3-202ENST00000618934 NUDCQ9Y266 331 aa26.13■■□□□ 1.77
PCDHGB3-202ENST00000618934 E9PCH4 1651 aa26.12■■□□□ 1.77
PCDHGB3-202ENST00000618934 MSH5O43196 834 aa26.11■■□□□ 1.77
PCDHGB3-202ENST00000618934 PLXNC1O60486 1568 aa26.08■■□□□ 1.77
PCDHGB3-202ENST00000618934 IQGAP3Q86VI3 1631 aa26.08■■□□□ 1.77
PCDHGB3-202ENST00000618934 MYBBP1AQ9BQG0 1328 aaKnown RBP26.08■■□□□ 1.76
PCDHGB3-202ENST00000618934 LRPPRCP42704 1394 aaKnown RBP26.06■■□□□ 1.76
PCDHGB3-202ENST00000618934 RALBP1Q15311 655 aa26.05■■□□□ 1.76
PCDHGB3-202ENST00000618934 BRD4O60885 1362 aaPredicted RBP26.04■■□□□ 1.76
PCDHGB3-202ENST00000618934 GPRASP1Q5JY77 1395 aa26.04■■□□□ 1.76
PCDHGB3-202ENST00000618934 RNF123Q5XPI4 1314 aa26.04■■□□□ 1.76
PCDHGB3-202ENST00000618934 PLCH2O75038 1416 aa26.03■■□□□ 1.76
PCDHGB3-202ENST00000618934 DUOX2Q9NRD8 1548 aa26.03■■□□□ 1.76
PCDHGB3-202ENST00000618934 TESK2Q96S53 571 aa26.03■■□□□ 1.76
PCDHGB3-202ENST00000618934 PER1O15534 1290 aaPredicted RBP26.03■■□□□ 1.76
PCDHGB3-202ENST00000618934 ZCCHC11Q5TAX3 1644 aaKnown RBP26.02■■□□□ 1.76
PCDHGB3-202ENST00000618934 DISP3Q9P2K9 1392 aa26.02■■□□□ 1.76
PCDHGB3-202ENST00000618934 TRAPPC8Q9Y2L5 1435 aa26.02■■□□□ 1.76
PCDHGB3-202ENST00000618934 EFCAB2Q5VUJ9 269 aa25.99■■□□□ 1.75
PCDHGB3-202ENST00000618934 MAGI2Q86UL8 1455 aa25.98■■□□□ 1.75
PCDHGB3-202ENST00000618934 PRDM15P57071 1507 aaPredicted RBP25.98■■□□□ 1.75
PCDHGB3-202ENST00000618934 KTN1Q86UP2 1357 aaKnown RBP25.98■■□□□ 1.75
PCDHGB3-202ENST00000618934 PARD3Q8TEW0 1356 aa25.98■■□□□ 1.75
PCDHGB3-202ENST00000618934 SALL2Q9Y467 1007 aaPredicted RBP25.97■■□□□ 1.75
PCDHGB3-202ENST00000618934 ERBINQ96RT1 1412 aa25.97■■□□□ 1.75
PCDHGB3-202ENST00000618934 COL17A1Q9UMD9 1497 aaPredicted RBP25.96■■□□□ 1.75
PCDHGB3-202ENST00000618934 FANCIQ9NVI1 1328 aa25.95■■□□□ 1.75
PCDHGB3-202ENST00000618934 ATP10AO60312 1499 aa25.95■■□□□ 1.74
PCDHGB3-202ENST00000618934 AFAP1Q8N556 730 aa25.95■■□□□ 1.74
PCDHGB3-202ENST00000618934 ABCC1P33527 1531 aa25.94■■□□□ 1.74
PCDHGB3-202ENST00000618934 CC2D1BQ5T0F9 858 aaKnown RBP25.94■■□□□ 1.74
PCDHGB3-202ENST00000618934 NLRP13Q86W25 1043 aa25.93■■□□□ 1.74
PCDHGB3-202ENST00000618934 PANK3Q9H999 370 aa25.93■■□□□ 1.74
PCDHGB3-202ENST00000618934 LAMC1P11047 1609 aa25.92■■□□□ 1.74
PCDHGB3-202ENST00000618934 CLASP1Q7Z460 1538 aa25.92■■□□□ 1.74
PCDHGB3-202ENST00000618934 UHRF1BP1LA0JNW5 1464 aa25.89■■□□□ 1.73
PCDHGB3-202ENST00000618934 SPAG9O60271 1321 aaKnown RBP25.87■■□□□ 1.73
PCDHGB3-202ENST00000618934 EIF2AK4Q9P2K8 1649 aaKnown RBP25.87■■□□□ 1.73
PCDHGB3-202ENST00000618934 CCDC136Q96JN2 1154 aa25.86■■□□□ 1.73
PCDHGB3-202ENST00000618934 TMF1P82094 1093 aa25.84■■□□□ 1.73
PCDHGB3-202ENST00000618934 RNF17Q9BXT8 1623 aaKnown RBP25.82■■□□□ 1.72
PCDHGB3-202ENST00000618934 CDCA7LQ96GN5 454 aa25.82■■□□□ 1.72
PCDHGB3-202ENST00000618934 ZFYVE16Q7Z3T8 1539 aa25.8■■□□□ 1.72
PCDHGB3-202ENST00000618934 MADDQ8WXG6 1647 aa25.79■■□□□ 1.72
PCDHGB3-202ENST00000618934 RRP1P56182 461 aaKnown RBP25.78■■□□□ 1.72
PCDHGB3-202ENST00000618934 WASHC2CQ9Y4E1 1318 aa25.78■■□□□ 1.72
PCDHGB3-202ENST00000618934 RCAN3Q9UKA8 241 aa25.77■■□□□ 1.72
PCDHGB3-202ENST00000618934 RTEL1-TNFRSF6BF6WH68 1400 aa25.76■■□□□ 1.71
PCDHGB3-202ENST00000618934 CLTCL1P53675 1640 aa25.75■■□□□ 1.71
PCDHGB3-202ENST00000618934 EXOC6Q8TAG9 804 aa25.75■■□□□ 1.71
PCDHGB3-202ENST00000618934 TRPM2O94759 1503 aa25.74■■□□□ 1.71
PCDHGB3-202ENST00000618934 WDR7Q9Y4E6 1490 aa25.74■■□□□ 1.71
PCDHGB3-202ENST00000618934 PTPRTO14522 1441 aa25.73■■□□□ 1.71
PCDHGB3-202ENST00000618934 SPHKAPQ2M3C7 1700 aa25.73■■□□□ 1.71
PCDHGB3-202ENST00000618934 IQGAP1P46940 1657 aa25.72■■□□□ 1.71
PCDHGB3-202ENST00000618934 CEP152O94986 1710 aa25.71■■□□□ 1.71
PCDHGB3-202ENST00000618934 DEPDC5O75140 1603 aa25.7■■□□□ 1.7
PCDHGB3-202ENST00000618934 BLMP54132 1417 aaPredicted RBP25.69■■□□□ 1.7
PCDHGB3-202ENST00000618934 KIF3BO15066 747 aa25.69■■□□□ 1.7
PCDHGB3-202ENST00000618934 PDE3BQ13370 1112 aa25.69■■□□□ 1.7
PCDHGB3-202ENST00000618934 ARAP3Q8WWN8 1544 aa25.69■■□□□ 1.7
PCDHGB3-202ENST00000618934 FANCAO15360 1455 aa25.69■■□□□ 1.7
PCDHGB3-202ENST00000618934 MYT1LQ9UL68 1186 aa25.68■■□□□ 1.7
PCDHGB3-202ENST00000618934 ADAMTS8Q9UP79 889 aa25.67■■□□□ 1.7
PCDHGB3-202ENST00000618934 ATP7AQ04656 1500 aa25.67■■□□□ 1.7
PCDHGB3-202ENST00000618934 SCAPERQ9BY12 1400 aa25.67■■□□□ 1.7
PCDHGB3-202ENST00000618934 TET3O43151 1660 aa25.65■■□□□ 1.7
PCDHGB3-202ENST00000618934 AMER1Q5JTC6 1135 aaPredicted RBP25.65■■□□□ 1.7
PCDHGB3-202ENST00000618934 INO80Q9ULG1 1556 aaPredicted RBP25.65■■□□□ 1.7
PCDHGB3-202ENST00000618934 PLIN1O60240 522 aa25.65■■□□□ 1.7
PCDHGB3-202ENST00000618934 ABCA9Q8IUA7 1624 aa25.65■■□□□ 1.7
PCDHGB3-202ENST00000618934 KNSTRNQ9Y448 316 aa25.64■■□□□ 1.7
PCDHGB3-202ENST00000618934 SCAF11Q99590 1463 aaKnown RBP25.64■■□□□ 1.7
PCDHGB3-202ENST00000618934 UGGT1Q9NYU2 1555 aa25.64■■□□□ 1.7
PCDHGB3-202ENST00000618934 PPP2R1AP30153 589 aa25.64■■□□□ 1.69
PCDHGB3-202ENST00000618934 VWDEQ8N2E2 1590 aa25.63■■□□□ 1.69
PCDHGB3-202ENST00000618934 ERICH6Q7L0X2 663 aa25.63■■□□□ 1.69
PCDHGB3-202ENST00000618934 ADGRL1O94910 1474 aa25.6■■□□□ 1.69
PCDHGB3-202ENST00000618934 KANK1Q14678 1352 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms