RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 CFDP1Q9UEE9 299 aaPredicted RBP20.18■□□□□ 0.82
CNTNAP3B-214ENST00000618777 DCAF11Q8TEB1 546 aa20.18■□□□□ 0.82
CNTNAP3B-214ENST00000618777 PLPPR3Q6T4P5 718 aa20.18■□□□□ 0.82
CNTNAP3B-214ENST00000618777 POGKQ9P215 609 aa20.18■□□□□ 0.82
CNTNAP3B-214ENST00000618777 MNS1Q8NEH6 495 aa20.17■□□□□ 0.82
CNTNAP3B-214ENST00000618777 SETD5Q9C0A6 1442 aa20.17■□□□□ 0.82
CNTNAP3B-214ENST00000618777 CREBRFQ8IUR6 639 aa20.17■□□□□ 0.82
CNTNAP3B-214ENST00000618777 GPATCH3Q96I76 525 aa20.17■□□□□ 0.82
CNTNAP3B-214ENST00000618777 PHLDB1Q86UU1 1377 aa20.17■□□□□ 0.82
CNTNAP3B-214ENST00000618777 NASPP49321 788 aaPredicted RBP20.16■□□□□ 0.82
CNTNAP3B-214ENST00000618777 CDR1P51861 262 aa20.16■□□□□ 0.82
CNTNAP3B-214ENST00000618777 AK7Q96M32 723 aa20.16■□□□□ 0.82
CNTNAP3B-214ENST00000618777 CEP164Q9UPV0 1460 aa20.16■□□□□ 0.82
CNTNAP3B-214ENST00000618777 DEF6Q9H4E7 631 aa20.15■□□□□ 0.82
CNTNAP3B-214ENST00000618777 H0YHG0 523 aa20.15■□□□□ 0.82
CNTNAP3B-214ENST00000618777 TAF7LQ5H9L4 462 aa20.15■□□□□ 0.82
CNTNAP3B-214ENST00000618777 PLEKHD1A6NEE1 506 aa20.15■□□□□ 0.82
CNTNAP3B-214ENST00000618777 ESPNB1AK53 854 aa20.14■□□□□ 0.82
CNTNAP3B-214ENST00000618777 NLRP13Q86W25 1043 aa20.14■□□□□ 0.82
CNTNAP3B-214ENST00000618777 RRP1P56182 461 aaKnown RBP20.14■□□□□ 0.81
CNTNAP3B-214ENST00000618777 SENP3Q9H4L4 574 aaPredicted RBP20.14■□□□□ 0.81
CNTNAP3B-214ENST00000618777 IFT57Q9NWB7 429 aa20.14■□□□□ 0.81
CNTNAP3B-214ENST00000618777 NCBP3Q53F19 620 aaKnown RBP20.13■□□□□ 0.81
CNTNAP3B-214ENST00000618777 CCDC191Q8NCU4 936 aa20.13■□□□□ 0.81
CNTNAP3B-214ENST00000618777 CLUAP1Q96AJ1 413 aa20.13■□□□□ 0.81
CNTNAP3B-214ENST00000618777 CHMP4CQ96CF2 233 aa20.13■□□□□ 0.81
CNTNAP3B-214ENST00000618777 EXOC6Q8TAG9 804 aa20.13■□□□□ 0.81
CNTNAP3B-214ENST00000618777 RASSF8Q8NHQ8 419 aa20.12■□□□□ 0.81
CNTNAP3B-214ENST00000618777 RTF1Q92541 710 aaKnown RBP20.12■□□□□ 0.81
CNTNAP3B-214ENST00000618777 TPD52L1Q16890 204 aaPredicted RBP20.12■□□□□ 0.81
CNTNAP3B-214ENST00000618777 ZBED9Q6R2W3 1325 aa20.12■□□□□ 0.81
CNTNAP3B-214ENST00000618777 UQCRHLA0A096LP55 91 aa20.12■□□□□ 0.81
CNTNAP3B-214ENST00000618777 IPO7O95373 1038 aaKnown RBP20.12■□□□□ 0.81
CNTNAP3B-214ENST00000618777 UQCRHP07919 91 aa20.12■□□□□ 0.81
CNTNAP3B-214ENST00000618777 RUFY1Q96T51 708 aa20.12■□□□□ 0.81
CNTNAP3B-214ENST00000618777 NUCB2P80303 420 aa20.11■□□□□ 0.81
CNTNAP3B-214ENST00000618777 CCDC173Q0VFZ6 552 aa20.11■□□□□ 0.81
CNTNAP3B-214ENST00000618777 KCNH8Q96L42 1107 aa20.11■□□□□ 0.81
CNTNAP3B-214ENST00000618777 ZHX1Q9UKY1 873 aaPredicted RBP20.11■□□□□ 0.81
CNTNAP3B-214ENST00000618777 U2AF1L5P0DN76 240 aaPredicted RBP20.11■□□□□ 0.81
CNTNAP3B-214ENST00000618777 U2AF1Q01081 240 aaKnown RBP eCLIP20.11■□□□□ 0.81
CNTNAP3B-214ENST00000618777 H3BQV1 296 aa20.1■□□□□ 0.81
CNTNAP3B-214ENST00000618777 FRAT2O75474 233 aaPredicted RBP20.1■□□□□ 0.81
CNTNAP3B-214ENST00000618777 IFFO2Q5TF58 517 aa20.1■□□□□ 0.81
CNTNAP3B-214ENST00000618777 ABCC9O60706 1549 aa20.1■□□□□ 0.81
CNTNAP3B-214ENST00000618777 HDAC5Q9UQL6 1122 aa20.1■□□□□ 0.81
CNTNAP3B-214ENST00000618777 PRDM10Q9NQV6 1147 aa20.1■□□□□ 0.81
CNTNAP3B-214ENST00000618777 CHMP4AQ9BY43 222 aa20.09■□□□□ 0.81
CNTNAP3B-214ENST00000618777 MSH5O43196 834 aa20.09■□□□□ 0.81
CNTNAP3B-214ENST00000618777 CGNL1Q0VF96 1302 aa20.08■□□□□ 0.81
CNTNAP3B-214ENST00000618777 PES1O00541 588 aaKnown RBP20.08■□□□□ 0.81
CNTNAP3B-214ENST00000618777 ISY1Q9ULR0 285 aaKnown RBP20.08■□□□□ 0.81
CNTNAP3B-214ENST00000618777 CGNQ9P2M7 1197 aaKnown RBP20.07■□□□□ 0.8
CNTNAP3B-214ENST00000618777 IRX3P78415 501 aaPredicted RBP20.06■□□□□ 0.8
CNTNAP3B-214ENST00000618777 FOXD4L6Q3SYB3 417 aaPredicted RBP20.06■□□□□ 0.8
CNTNAP3B-214ENST00000618777 HSP90AB3PQ58FF7 597 aa20.06■□□□□ 0.8
CNTNAP3B-214ENST00000618777 FOXD4L3Q6VB84 417 aaPredicted RBP20.06■□□□□ 0.8
CNTNAP3B-214ENST00000618777 DCTN1Q14203 1278 aa20.06■□□□□ 0.8
CNTNAP3B-214ENST00000618777 LEKR1Q6ZMV7 388 aa20.06■□□□□ 0.8
CNTNAP3B-214ENST00000618777 ERCC4Q92889 916 aaPredicted RBP20.06■□□□□ 0.8
CNTNAP3B-214ENST00000618777 FAM184AQ8NB25 1140 aa20.05■□□□□ 0.8
CNTNAP3B-214ENST00000618777 TRAK2O60296 914 aa20.05■□□□□ 0.8
CNTNAP3B-214ENST00000618777 USP8P40818 1118 aa20.05■□□□□ 0.8
CNTNAP3B-214ENST00000618777 CRBNQ96SW2 442 aa20.04■□□□□ 0.8
CNTNAP3B-214ENST00000618777 ROCK2O75116 1388 aaKnown RBP20.04■□□□□ 0.8
CNTNAP3B-214ENST00000618777 STK31Q9BXU1 1019 aa20.03■□□□□ 0.8
CNTNAP3B-214ENST00000618777 REC8O95072 547 aa20.02■□□□□ 0.8
CNTNAP3B-214ENST00000618777 NPHP1O15259 732 aa20.01■□□□□ 0.79
CNTNAP3B-214ENST00000618777 SASS6Q6UVJ0 657 aa20.01■□□□□ 0.79
CNTNAP3B-214ENST00000618777 ANKRD20A12PQ8NF67 263 aa20.01■□□□□ 0.79
CNTNAP3B-214ENST00000618777 CALCOCO1Q9P1Z2 691 aa20■□□□□ 0.79
CNTNAP3B-214ENST00000618777 MCTP1Q6DN14 999 aa20■□□□□ 0.79
CNTNAP3B-214ENST00000618777 ANKRD45Q5TZF3 282 aa19.98■□□□□ 0.79
CNTNAP3B-214ENST00000618777 BICD2Q8TD16 824 aa19.98■□□□□ 0.79
CNTNAP3B-214ENST00000618777 PLIN1O60240 522 aa19.97■□□□□ 0.79
CNTNAP3B-214ENST00000618777 SRPK2P78362 688 aaKnown RBP19.97■□□□□ 0.79
CNTNAP3B-214ENST00000618777 MYBBP1AQ9BQG0 1328 aaKnown RBP19.96■□□□□ 0.79
CNTNAP3B-214ENST00000618777 GRPEL1Q9HAV7 217 aa19.96■□□□□ 0.79
CNTNAP3B-214ENST00000618777 ERICH4A6NGS2 130 aa19.95■□□□□ 0.78
CNTNAP3B-214ENST00000618777 GORABQ5T7V8 394 aa19.95■□□□□ 0.78
CNTNAP3B-214ENST00000618777 PRM3Q9NNZ6 103 aa19.95■□□□□ 0.78
CNTNAP3B-214ENST00000618777 RAB3GAP2Q9H2M9 1393 aa19.95■□□□□ 0.78
CNTNAP3B-214ENST00000618777 CBX1P83916 185 aa19.95■□□□□ 0.78
CNTNAP3B-214ENST00000618777 PDCL2Q8N4E4 241 aa19.95■□□□□ 0.78
CNTNAP3B-214ENST00000618777 FHAD1B1AJZ9 1412 aa19.94■□□□□ 0.78
CNTNAP3B-214ENST00000618777 E9PSI1 815 aa19.94■□□□□ 0.78
CNTNAP3B-214ENST00000618777 KIF15Q9NS87 1388 aa19.94■□□□□ 0.78
CNTNAP3B-214ENST00000618777 ZKSCAN2Q63HK3 967 aa19.94■□□□□ 0.78
CNTNAP3B-214ENST00000618777 MBD3O95983 291 aa19.93■□□□□ 0.78
CNTNAP3B-214ENST00000618777 HOOK1Q9UJC3 728 aaKnown RBP19.93■□□□□ 0.78
CNTNAP3B-214ENST00000618777 SCRIBQ14160 1630 aa19.93■□□□□ 0.78
CNTNAP3B-214ENST00000618777 C22orf23Q9BZE7 217 aa19.93■□□□□ 0.78
CNTNAP3B-214ENST00000618777 CCDC146Q8IYE0 955 aa19.93■□□□□ 0.78
CNTNAP3B-214ENST00000618777 HDGFL2Q7Z4V5 671 aaPredicted RBP19.92■□□□□ 0.78
CNTNAP3B-214ENST00000618777 ZSCAN30Q86W11 494 aa19.92■□□□□ 0.78
CNTNAP3B-214ENST00000618777 LETM1O95202 739 aaPredicted RBP19.92■□□□□ 0.78
CNTNAP3B-214ENST00000618777 RILPL2Q969X0 211 aa19.92■□□□□ 0.78
CNTNAP3B-214ENST00000618777 DNAJC2Q99543 621 aaKnown RBP19.92■□□□□ 0.78
CNTNAP3B-214ENST00000618777 PAXIP1Q6ZW49 1069 aaPredicted RBP19.91■□□□□ 0.78
CNTNAP3B-214ENST00000618777 STK11IPQ8N1F8 1099 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms