RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 CGNL1Q0VF96 1302 aa25.98■■□□□ 1.75
PCSK6-217ENST00000618548 ITPRIPQ8IWB1 547 aa25.98■■□□□ 1.75
PCSK6-217ENST00000618548 NCOA1Q15788 1441 aa25.97■■□□□ 1.75
PCSK6-217ENST00000618548 FANCD2Q9BXW9 1451 aa25.95■■□□□ 1.74
PCSK6-217ENST00000618548 E9PSI1 815 aa25.95■■□□□ 1.74
PCSK6-217ENST00000618548 U2AF1L5P0DN76 240 aaPredicted RBP25.94■■□□□ 1.74
PCSK6-217ENST00000618548 U2AF1Q01081 240 aaKnown RBP eCLIP25.94■■□□□ 1.74
PCSK6-217ENST00000618548 ZBTB7CA1YPR0 619 aa25.94■■□□□ 1.74
PCSK6-217ENST00000618548 FAM43AQ8N2R8 423 aa25.93■■□□□ 1.74
PCSK6-217ENST00000618548 MAP3K1Q13233 1512 aa25.93■■□□□ 1.74
PCSK6-217ENST00000618548 PANK1Q8TE04 598 aa25.91■■□□□ 1.74
PCSK6-217ENST00000618548 PLCB2Q00722 1185 aa25.91■■□□□ 1.74
PCSK6-217ENST00000618548 C20orf194Q5TEA3 1177 aa25.91■■□□□ 1.74
PCSK6-217ENST00000618548 CCDC144AA2RUR9 1427 aa25.9■■□□□ 1.74
PCSK6-217ENST00000618548 PCF11O94913 1555 aaKnown RBP25.9■■□□□ 1.74
PCSK6-217ENST00000618548 SMC4Q9NTJ3 1288 aa25.9■■□□□ 1.74
PCSK6-217ENST00000618548 DDX11L8A8MPP1 907 aa25.87■■□□□ 1.73
PCSK6-217ENST00000618548 STAG3Q9UJ98 1225 aa25.87■■□□□ 1.73
PCSK6-217ENST00000618548 NBPF1Q3BBV0 1214 aa25.86■■□□□ 1.73
PCSK6-217ENST00000618548 NCAPD3P42695 1498 aa25.86■■□□□ 1.73
PCSK6-217ENST00000618548 CASC1Q6TDU7 716 aa25.86■■□□□ 1.73
PCSK6-217ENST00000618548 CHMP5Q9NZZ3 219 aa25.85■■□□□ 1.73
PCSK6-217ENST00000618548 POGKQ9P215 609 aa25.85■■□□□ 1.73
PCSK6-217ENST00000618548 PTPRKQ15262 1439 aa25.84■■□□□ 1.73
PCSK6-217ENST00000618548 BCAR3O75815 825 aa25.83■■□□□ 1.73
PCSK6-217ENST00000618548 ANKRD30BQ9BXX2 1392 aa25.83■■□□□ 1.73
PCSK6-217ENST00000618548 MIA2Q96PC5 1412 aa25.83■■□□□ 1.73
PCSK6-217ENST00000618548 SAFB2Q14151 953 aaKnown RBP eCLIP25.81■■□□□ 1.722e-6■□□□□ 9.5
PCSK6-217ENST00000618548 IPO8O15397 1037 aaKnown RBP25.8■■□□□ 1.72
PCSK6-217ENST00000618548 AQRO60306 1485 aaKnown RBP eCLIP25.79■■□□□ 1.726e-7■■□□□ 11.6
PCSK6-217ENST00000618548 APBB1O00213 710 aa25.79■■□□□ 1.72
PCSK6-217ENST00000618548 CHMP4BQ9H444 224 aaKnown RBP25.79■■□□□ 1.72
PCSK6-217ENST00000618548 ANKRD50Q9ULJ7 1429 aa25.78■■□□□ 1.72
PCSK6-217ENST00000618548 EFCAB5A4FU69 1503 aa25.78■■□□□ 1.72
PCSK6-217ENST00000618548 CALD1Q05682 793 aaKnown RBP25.78■■□□□ 1.72
PCSK6-217ENST00000618548 PTMSP20962 102 aa25.77■■□□□ 1.72
PCSK6-217ENST00000618548 DDX49Q9Y6V7 483 aaKnown RBP25.77■■□□□ 1.72
PCSK6-217ENST00000618548 TRAK2O60296 914 aa25.76■■□□□ 1.71
PCSK6-217ENST00000618548 C22orf23Q9BZE7 217 aa25.76■■□□□ 1.71
PCSK6-217ENST00000618548 GAPVD1Q14C86 1478 aa25.75■■□□□ 1.71
PCSK6-217ENST00000618548 PPP2R1AP30153 589 aa25.75■■□□□ 1.71
PCSK6-217ENST00000618548 PTPN23Q9H3S7 1636 aa25.75■■□□□ 1.71
PCSK6-217ENST00000618548 KIAA1107Q9UPP5 1409 aa25.74■■□□□ 1.71
PCSK6-217ENST00000618548 ZKSCAN2Q63HK3 967 aa25.73■■□□□ 1.71
PCSK6-217ENST00000618548 MRE11P49959 708 aa25.72■■□□□ 1.71
PCSK6-217ENST00000618548 EHBP1L1Q8N3D4 1523 aa25.71■■□□□ 1.71
PCSK6-217ENST00000618548 PDS5BQ9NTI5 1447 aa25.7■■□□□ 1.7
PCSK6-217ENST00000618548 WASHC2CQ9Y4E1 1318 aa25.68■■□□□ 1.7
PCSK6-217ENST00000618548 PDZRN3Q9UPQ7 1066 aa25.68■■□□□ 1.7
PCSK6-217ENST00000618548 CARMIL2Q6F5E8 1435 aa25.68■■□□□ 1.7
PCSK6-217ENST00000618548 SRPK2P78362 688 aaKnown RBP25.67■■□□□ 1.7
PCSK6-217ENST00000618548 PKNOX2Q96KN3 472 aa25.67■■□□□ 1.7
PCSK6-217ENST00000618548 SKOR2Q2VWA4 1001 aaPredicted RBP25.66■■□□□ 1.7
PCSK6-217ENST00000618548 EIF3AQ14152 1382 aaKnown RBP25.66■■□□□ 1.7
PCSK6-217ENST00000618548 ANKRD45Q5TZF3 282 aa25.65■■□□□ 1.7
PCSK6-217ENST00000618548 RPRD2Q5VT52 1461 aaKnown RBP25.65■■□□□ 1.7
PCSK6-217ENST00000618548 DZIP1LQ8IYY4 767 aaKnown RBP25.65■■□□□ 1.7
PCSK6-217ENST00000618548 DAPK1P53355 1430 aa25.64■■□□□ 1.7
PCSK6-217ENST00000618548 RSPH4AQ5TD94 716 aa25.64■■□□□ 1.7
PCSK6-217ENST00000618548 FOXD4L5Q5VV16 416 aaPredicted RBP25.64■■□□□ 1.7
PCSK6-217ENST00000618548 FOXD4L4Q8WXT5 416 aaPredicted RBP25.64■■□□□ 1.7
PCSK6-217ENST00000618548 FAM13BQ9NYF5 915 aa25.64■■□□□ 1.69
PCSK6-217ENST00000618548 JPH4Q96JJ6 628 aa25.63■■□□□ 1.69
PCSK6-217ENST00000618548 SUPT6HQ7KZ85 1726 aaKnown RBP25.63■■□□□ 1.69
PCSK6-217ENST00000618548 PDE3AQ14432 1141 aa25.63■■□□□ 1.69
PCSK6-217ENST00000618548 UBE2Q2Q8WVN8 375 aa25.62■■□□□ 1.69
PCSK6-217ENST00000618548 TRAK1Q9UPV9 953 aa25.62■■□□□ 1.69
PCSK6-217ENST00000618548 MCM4P33991 863 aa25.61■■□□□ 1.69
PCSK6-217ENST00000618548 LNPKQ9C0E8 428 aa25.61■■□□□ 1.69
PCSK6-217ENST00000618548 BIVM-ERCC5R4GMW8 1640 aa25.61■■□□□ 1.69
PCSK6-217ENST00000618548 NGEFQ8N5V2 710 aa25.6■■□□□ 1.69
PCSK6-217ENST00000618548 STK26Q9P289 416 aa25.58■■□□□ 1.69
PCSK6-217ENST00000618548 KANK1Q14678 1352 aa25.58■■□□□ 1.69
PCSK6-217ENST00000618548 KIAA2012Q0VF49 1180 aa25.58■■□□□ 1.69
PCSK6-217ENST00000618548 SLFN5Q08AF3 891 aa25.57■■□□□ 1.68
PCSK6-217ENST00000618548 ELL2O00472 640 aaPredicted RBP25.57■■□□□ 1.68
PCSK6-217ENST00000618548 DDX19BQ9UMR2 479 aa25.56■■□□□ 1.68
PCSK6-217ENST00000618548 RUNDC1Q96C34 613 aa25.55■■□□□ 1.68
PCSK6-217ENST00000618548 PEG3Q9GZU2 1588 aa25.55■■□□□ 1.68
PCSK6-217ENST00000618548 RNF123Q5XPI4 1314 aa25.55■■□□□ 1.68
PCSK6-217ENST00000618548 TCP11L2Q8N4U5 519 aa25.55■■□□□ 1.68
PCSK6-217ENST00000618548 CHAF1AQ13111 956 aaPredicted RBP25.54■■□□□ 1.68
PCSK6-217ENST00000618548 NOL8Q76FK4 1167 aaKnown RBP25.54■■□□□ 1.68
PCSK6-217ENST00000618548 DUSP27Q5VZP5 1158 aa25.54■■□□□ 1.68
PCSK6-217ENST00000618548 CFAP44Q96MT7 982 aa25.54■■□□□ 1.68
PCSK6-217ENST00000618548 KIF3BO15066 747 aa25.53■■□□□ 1.68
PCSK6-217ENST00000618548 GRPEL1Q9HAV7 217 aa25.53■■□□□ 1.68
PCSK6-217ENST00000618548 ESPNB1AK53 854 aa25.53■■□□□ 1.68
PCSK6-217ENST00000618548 ROCK1Q13464 1354 aa25.53■■□□□ 1.68
PCSK6-217ENST00000618548 POLA1P09884 1462 aaPredicted RBP25.53■■□□□ 1.68
PCSK6-217ENST00000618548 NPM1P06748 294 aaKnown RBP eCLIP25.52■■□□□ 1.68
PCSK6-217ENST00000618548 BICRAQ9NZM4 1560 aa25.52■■□□□ 1.68
PCSK6-217ENST00000618548 CDK13Q14004 1512 aaKnown RBP25.52■■□□□ 1.68
PCSK6-217ENST00000618548 EFCAB2Q5VUJ9 269 aa25.52■■□□□ 1.68
PCSK6-217ENST00000618548 NASPP49321 788 aaPredicted RBP25.51■■□□□ 1.68
PCSK6-217ENST00000618548 C8orf34Q49A92 452 aa25.5■■□□□ 1.67
PCSK6-217ENST00000618548 FOXD4L6Q3SYB3 417 aaPredicted RBP25.5■■□□□ 1.67
PCSK6-217ENST00000618548 FOXD4L3Q6VB84 417 aaPredicted RBP25.5■■□□□ 1.67
PCSK6-217ENST00000618548 DHX29Q7Z478 1369 aaKnown RBP25.49■■□□□ 1.67
PCSK6-217ENST00000618548 MCCP23508 829 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms