RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 CSRNP3Q8WYN3 585 aa12.42□□□□□ -0.42
SCAMP1-206ENST00000618166 MAGI2Q86UL8 1455 aa12.42□□□□□ -0.42
SCAMP1-206ENST00000618166 C9orf84Q5VXU9 1444 aa12.41□□□□□ -0.42
SCAMP1-206ENST00000618166 ATP10AO60312 1499 aa12.41□□□□□ -0.42
SCAMP1-206ENST00000618166 MS4A3Q96HJ5 214 aa12.41□□□□□ -0.42
SCAMP1-206ENST00000618166 SETD1AO15047 1707 aaKnown RBP12.41□□□□□ -0.42
SCAMP1-206ENST00000618166 ALKQ9UM73 1620 aa12.4□□□□□ -0.42
SCAMP1-206ENST00000618166 TOM1O60784 492 aa12.4□□□□□ -0.42
SCAMP1-206ENST00000618166 SETD1BQ9UPS6 1966 aaKnown RBP12.39□□□□□ -0.43
SCAMP1-206ENST00000618166 TRAPPC8Q9Y2L5 1435 aa12.39□□□□□ -0.43
SCAMP1-206ENST00000618166 RAPGEF2Q9Y4G8 1499 aa12.38□□□□□ -0.43
SCAMP1-206ENST00000618166 GOLGA3Q08378 1498 aa12.38□□□□□ -0.43
SCAMP1-206ENST00000618166 MAMSTRQ6ZN01 415 aa12.37□□□□□ -0.43
SCAMP1-206ENST00000618166 P3H3Q8IVL6 736 aa12.35□□□□□ -0.43
SCAMP1-206ENST00000618166 CFAP74Q9C0B2 1584 aa12.34□□□□□ -0.43
SCAMP1-206ENST00000618166 SCAPERQ9BY12 1400 aa12.34□□□□□ -0.43
SCAMP1-206ENST00000618166 LCE2DQ5TA82 110 aaPredicted RBP12.33□□□□□ -0.44
SCAMP1-206ENST00000618166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.32□□□□□ -0.44
SCAMP1-206ENST00000618166 TCOF1Q13428 1488 aaKnown RBP12.31□□□□□ -0.44
SCAMP1-206ENST00000618166 SUPT5HO00267 1087 aaKnown RBP12.3□□□□□ -0.44
SCAMP1-206ENST00000618166 CTTNBP2Q8WZ74 1663 aa12.3□□□□□ -0.44
SCAMP1-206ENST00000618166 PKD2Q13563 968 aa12.3□□□□□ -0.44
SCAMP1-206ENST00000618166 UPF1Q92900 1129 aaKnown RBP eCLIP12.29□□□□□ -0.44
SCAMP1-206ENST00000618166 PLA2R1Q13018 1463 aa12.28□□□□□ -0.44
SCAMP1-206ENST00000618166 CPS1P31327 1500 aa12.27□□□□□ -0.44
SCAMP1-206ENST00000618166 SCUBE2Q9NQ36 999 aa12.27□□□□□ -0.45
SCAMP1-206ENST00000618166 NUP153P49790 1475 aaKnown RBP12.26□□□□□ -0.45
SCAMP1-206ENST00000618166 PTPRKQ15262 1439 aa12.26□□□□□ -0.45
SCAMP1-206ENST00000618166 RAPGEF6Q8TEU7 1601 aa12.26□□□□□ -0.45
SCAMP1-206ENST00000618166 ATN1P54259 1190 aaPredicted RBP12.26□□□□□ -0.45
SCAMP1-206ENST00000618166 FAM163AQ96GL9 167 aaPredicted RBP12.26□□□□□ -0.45
SCAMP1-206ENST00000618166 ESF1Q9H501 851 aaKnown RBP12.26□□□□□ -0.45
SCAMP1-206ENST00000618166 DIP2CQ9Y2E4 1556 aa12.26□□□□□ -0.45
SCAMP1-206ENST00000618166 SHANK2Q9UPX8 1470 aa12.26□□□□□ -0.45
SCAMP1-206ENST00000618166 AFAP1Q8N556 730 aa12.23□□□□□ -0.45
SCAMP1-206ENST00000618166 CCDC61Q9Y6R9 512 aa12.23□□□□□ -0.45
SCAMP1-206ENST00000618166 MYO3AQ8NEV4 1616 aa12.23□□□□□ -0.45
SCAMP1-206ENST00000618166 NPATQ14207 1427 aa12.23□□□□□ -0.45
SCAMP1-206ENST00000618166 TSPYL2Q9H2G4 693 aaPredicted RBP12.22□□□□□ -0.45
SCAMP1-206ENST00000618166 ZNF142P52746 1687 aaPredicted RBP12.22□□□□□ -0.45
SCAMP1-206ENST00000618166 ABCA6Q8N139 1617 aa12.22□□□□□ -0.45
SCAMP1-206ENST00000618166 CEP170BQ9Y4F5 1589 aaPredicted RBP12.21□□□□□ -0.45
SCAMP1-206ENST00000618166 PLEKHD1A6NEE1 506 aa12.21□□□□□ -0.45
SCAMP1-206ENST00000618166 POTEFA5A3E0 1075 aa12.2□□□□□ -0.46
SCAMP1-206ENST00000618166 MYT1LQ9UL68 1186 aa12.2□□□□□ -0.46
SCAMP1-206ENST00000618166 AGLP35573 1532 aa12.2□□□□□ -0.46
SCAMP1-206ENST00000618166 REREQ9P2R6 1566 aa12.2□□□□□ -0.46
SCAMP1-206ENST00000618166 PLCH2O75038 1416 aa12.2□□□□□ -0.46
SCAMP1-206ENST00000618166 KIF12Q96FN5 646 aa12.19□□□□□ -0.46
SCAMP1-206ENST00000618166 SUPT6HQ7KZ85 1726 aaKnown RBP12.19□□□□□ -0.46
SCAMP1-206ENST00000618166 VWDEQ8N2E2 1590 aa12.19□□□□□ -0.46
SCAMP1-206ENST00000618166 NEURL4Q96JN8 1562 aa12.19□□□□□ -0.46
SCAMP1-206ENST00000618166 CNTLNQ9NXG0 1405 aa12.19□□□□□ -0.46
SCAMP1-206ENST00000618166 ZMYM3Q14202 1370 aa12.18□□□□□ -0.46
SCAMP1-206ENST00000618166 KDM5CP41229 1560 aa12.18□□□□□ -0.46
SCAMP1-206ENST00000618166 ZNF518AQ6AHZ1 1483 aa12.18□□□□□ -0.46
SCAMP1-206ENST00000618166 BMP2KQ9NSY1 1161 aaPredicted RBP12.18□□□□□ -0.46
SCAMP1-206ENST00000618166 FAM9AQ8IZU1 332 aaPredicted RBP12.17□□□□□ -0.46
SCAMP1-206ENST00000618166 TRIM52Q96A61 297 aa12.14□□□□□ -0.47
SCAMP1-206ENST00000618166 TRPC6Q9Y210 931 aa12.14□□□□□ -0.47
SCAMP1-206ENST00000618166 MROH2AA6NES4 1674 aa12.13□□□□□ -0.47
SCAMP1-206ENST00000618166 LRRC7Q96NW7 1537 aa12.13□□□□□ -0.47
SCAMP1-206ENST00000618166 RNF17Q9BXT8 1623 aaKnown RBP12.13□□□□□ -0.47
SCAMP1-206ENST00000618166 SAMD9Q5K651 1589 aa12.12□□□□□ -0.47
SCAMP1-206ENST00000618166 DNMT1P26358 1616 aaKnown RBP12.12□□□□□ -0.47
SCAMP1-206ENST00000618166 TIE1P35590 1138 aa12.12□□□□□ -0.47
SCAMP1-206ENST00000618166 PROM2Q8N271 834 aa12.12□□□□□ -0.47
SCAMP1-206ENST00000618166 EFCAB2Q5VUJ9 269 aa12.11□□□□□ -0.47
SCAMP1-206ENST00000618166 STRCP1A6NGW2 1772 aa12.11□□□□□ -0.47
SCAMP1-206ENST00000618166 POLR1AO95602 1720 aaPredicted RBP12.1□□□□□ -0.47
SCAMP1-206ENST00000618166 MLH3Q9UHC1 1453 aa12.1□□□□□ -0.47
SCAMP1-206ENST00000618166 CLTCQ00610 1675 aaKnown RBP12.09□□□□□ -0.47
SCAMP1-206ENST00000618166 A2ML1A8K2U0 1454 aa12.09□□□□□ -0.47
SCAMP1-206ENST00000618166 CDK13Q14004 1512 aaKnown RBP12.09□□□□□ -0.47
SCAMP1-206ENST00000618166 MAP3K13O43283 966 aa12.07□□□□□ -0.48
SCAMP1-206ENST00000618166 MYO5CQ9NQX4 1742 aa12.06□□□□□ -0.48
SCAMP1-206ENST00000618166 RANGAP1P46060 587 aaPredicted RBP12.05□□□□□ -0.48
SCAMP1-206ENST00000618166 ARHGAP5Q13017 1502 aa12.05□□□□□ -0.48
SCAMP1-206ENST00000618166 NPHP4O75161 1426 aaPredicted RBP12.05□□□□□ -0.48
SCAMP1-206ENST00000618166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.05□□□□□ -0.48
SCAMP1-206ENST00000618166 CDAN1Q8IWY9 1227 aa12.05□□□□□ -0.48
SCAMP1-206ENST00000618166 COLQQ9Y215 455 aaPredicted RBP12.05□□□□□ -0.48
SCAMP1-206ENST00000618166 SETBP1Q9Y6X0 1596 aa12.04□□□□□ -0.48
SCAMP1-206ENST00000618166 PRXQ9BXM0 1461 aa12.04□□□□□ -0.48
SCAMP1-206ENST00000618166 KIDINS220Q9ULH0 1771 aa12.04□□□□□ -0.48
SCAMP1-206ENST00000618166 TTLL13PA6NNM8 815 aa12.03□□□□□ -0.48
SCAMP1-206ENST00000618166 KIF14Q15058 1648 aa12.03□□□□□ -0.48
SCAMP1-206ENST00000618166 SYNMO15061 1565 aa12.03□□□□□ -0.48
SCAMP1-206ENST00000618166 SEC24BO95487 1268 aa12.01□□□□□ -0.49
SCAMP1-206ENST00000618166 ANKLE2Q86XL3 938 aa12.01□□□□□ -0.49
SCAMP1-206ENST00000618166 FAM135BQ49AJ0 1406 aa12.01□□□□□ -0.49
SCAMP1-206ENST00000618166 ABCC1P33527 1531 aa12□□□□□ -0.49
SCAMP1-206ENST00000618166 MED14O60244 1454 aa12□□□□□ -0.49
SCAMP1-206ENST00000618166 RASEFQ8IZ41 740 aa12□□□□□ -0.49
SCAMP1-206ENST00000618166 LRP6O75581 1613 aa12□□□□□ -0.49
SCAMP1-206ENST00000618166 FBXO31Q5XUX0 539 aaPredicted RBP11.99□□□□□ -0.49
SCAMP1-206ENST00000618166 IQGAP1P46940 1657 aa11.98□□□□□ -0.49
SCAMP1-206ENST00000618166 ITSN2Q9NZM3 1697 aa11.98□□□□□ -0.49
SCAMP1-206ENST00000618166 IER5LQ5T953 404 aa11.97□□□□□ -0.49
SCAMP1-206ENST00000618166 GGT6Q6P531 493 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms