RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 PAK3O75914 559 aaPredicted RBP7.53□□□□□ -1.2
CPNE4-214ENST00000617767 TAF7LQ5H9L4 462 aa7.53□□□□□ -1.2
CPNE4-214ENST00000617767 NOP58Q9Y2X3 529 aaKnown RBP7.53□□□□□ -1.2
CPNE4-214ENST00000617767 SAMD9LQ8IVG5 1584 aa7.52□□□□□ -1.2
CPNE4-214ENST00000617767 BRPF3Q9ULD4 1205 aa7.52□□□□□ -1.21
CPNE4-214ENST00000617767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.52□□□□□ -1.21
CPNE4-214ENST00000617767 CCDC184Q52MB2 194 aa7.52□□□□□ -1.21
CPNE4-214ENST00000617767 OSCARQ8IYS5 282 aa7.52□□□□□ -1.21
CPNE4-214ENST00000617767 KDM5BQ9UGL1 1544 aa7.52□□□□□ -1.21
CPNE4-214ENST00000617767 EFCAB2Q5VUJ9 269 aa7.51□□□□□ -1.21
CPNE4-214ENST00000617767 PAXIP1Q6ZW49 1069 aaPredicted RBP7.51□□□□□ -1.21
CPNE4-214ENST00000617767 FAM9BQ8IZU0 186 aa7.51□□□□□ -1.21
CPNE4-214ENST00000617767 CYB5RLQ6IPT4 315 aa7.51□□□□□ -1.21
CPNE4-214ENST00000617767 ADCY10Q96PN6 1610 aa7.51□□□□□ -1.21
CPNE4-214ENST00000617767 ABCC2Q92887 1545 aa7.51□□□□□ -1.21
CPNE4-214ENST00000617767 CARD11Q9BXL7 1154 aa7.51□□□□□ -1.21
CPNE4-214ENST00000617767 NPM1P06748 294 aaKnown RBP eCLIP7.5□□□□□ -1.21
CPNE4-214ENST00000617767 ADGBQ8N7X0 1667 aa7.5□□□□□ -1.21
CPNE4-214ENST00000617767 PLEKHH2Q8IVE3 1493 aa7.5□□□□□ -1.21
CPNE4-214ENST00000617767 CFAP65Q6ZU64 1925 aaKnown RBP7.5□□□□□ -1.21
CPNE4-214ENST00000617767 ZCCHC11Q5TAX3 1644 aaKnown RBP7.5□□□□□ -1.21
CPNE4-214ENST00000617767 RPRD2Q5VT52 1461 aaKnown RBP7.5□□□□□ -1.21
CPNE4-214ENST00000617767 MBD5Q9P267 1494 aa7.5□□□□□ -1.21
CPNE4-214ENST00000617767 KIAA1107Q9UPP5 1409 aa7.5□□□□□ -1.21
CPNE4-214ENST00000617767 CCDC141Q6ZP82 1450 aa7.49□□□□□ -1.21
CPNE4-214ENST00000617767 CROCC2H7BZ55 1655 aa7.49□□□□□ -1.21
CPNE4-214ENST00000617767 TRAPPC8Q9Y2L5 1435 aa7.49□□□□□ -1.21
CPNE4-214ENST00000617767 ARHGEF12Q9NZN5 1544 aa7.49□□□□□ -1.21
CPNE4-214ENST00000617767 HNRNPUQ00839 825 aaKnown RBP eCLIP7.49□□□□□ -1.21
CPNE4-214ENST00000617767 SPAG9O60271 1321 aaKnown RBP7.49□□□□□ -1.21
CPNE4-214ENST00000617767 KIF3BO15066 747 aa7.49□□□□□ -1.21
CPNE4-214ENST00000617767 SHROOM2Q13796 1616 aa7.49□□□□□ -1.21
CPNE4-214ENST00000617767 CHGAP10645 457 aaKnown RBP7.48□□□□□ -1.21
CPNE4-214ENST00000617767 IRX6P78412 446 aaPredicted RBP7.48□□□□□ -1.21
CPNE4-214ENST00000617767 NBPF1Q3BBV0 1214 aa7.48□□□□□ -1.21
CPNE4-214ENST00000617767 PREX2Q70Z35 1606 aa7.48□□□□□ -1.21
CPNE4-214ENST00000617767 ST20-MTHFSA0A0A6YYL1 179 aa7.48□□□□□ -1.21
CPNE4-214ENST00000617767 ARXQ96QS3 562 aa7.48□□□□□ -1.21
CPNE4-214ENST00000617767 KIF7Q2M1P5 1343 aa7.47□□□□□ -1.21
CPNE4-214ENST00000617767 MYO5CQ9NQX4 1742 aa7.47□□□□□ -1.21
CPNE4-214ENST00000617767 TEX14Q8IWB6 1497 aa7.47□□□□□ -1.21
CPNE4-214ENST00000617767 CLASP1Q7Z460 1538 aa7.47□□□□□ -1.21
CPNE4-214ENST00000617767 DHX37Q8IY37 1157 aaKnown RBP7.47□□□□□ -1.21
CPNE4-214ENST00000617767 GGT6Q6P531 493 aa7.46□□□□□ -1.21
CPNE4-214ENST00000617767 USP47Q96K76 1375 aa7.46□□□□□ -1.21
CPNE4-214ENST00000617767 SCAPERQ9BY12 1400 aa7.46□□□□□ -1.21
CPNE4-214ENST00000617767 NUTM2DQ5VT03 806 aaPredicted RBP7.46□□□□□ -1.22
CPNE4-214ENST00000617767 ADGRL2O95490 1459 aa7.46□□□□□ -1.22
CPNE4-214ENST00000617767 MRS2Q9HD23 443 aa7.46□□□□□ -1.22
CPNE4-214ENST00000617767 RAPGEF3O95398 923 aa7.45□□□□□ -1.22
CPNE4-214ENST00000617767 CCDC144AA2RUR9 1427 aa7.45□□□□□ -1.22
CPNE4-214ENST00000617767 CCDC7Q96M83 1385 aa7.45□□□□□ -1.22
CPNE4-214ENST00000617767 FAM135AQ9P2D6 1515 aa7.44□□□□□ -1.22
CPNE4-214ENST00000617767 PLCH2O75038 1416 aa7.44□□□□□ -1.22
CPNE4-214ENST00000617767 ASXL2Q76L83 1435 aa7.44□□□□□ -1.22
CPNE4-214ENST00000617767 ROCK2O75116 1388 aaKnown RBP7.44□□□□□ -1.22
CPNE4-214ENST00000617767 HSP90AA2PQ14568 343 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-214ENST00000617767 RSPH4AQ5TD94 716 aa7.43□□□□□ -1.22
CPNE4-214ENST00000617767 FANCAO15360 1455 aa7.43□□□□□ -1.22
CPNE4-214ENST00000617767 NAP1L2Q9ULW6 460 aaPredicted RBP7.42□□□□□ -1.22
CPNE4-214ENST00000617767 SHANK2Q9UPX8 1470 aa7.42□□□□□ -1.22
CPNE4-214ENST00000617767 WDR7Q9Y4E6 1490 aa7.42□□□□□ -1.22
CPNE4-214ENST00000617767 CHMP4BQ9H444 224 aaKnown RBP7.42□□□□□ -1.22
CPNE4-214ENST00000617767 PRKRIP1Q9H875 184 aaPredicted RBP7.42□□□□□ -1.22
CPNE4-214ENST00000617767 ARHGEF5Q12774 1597 aa7.41□□□□□ -1.22
CPNE4-214ENST00000617767 ADGRL1O94910 1474 aa7.41□□□□□ -1.22
CPNE4-214ENST00000617767 NEFMP07197 916 aa7.41□□□□□ -1.22
CPNE4-214ENST00000617767 CC2D1BQ5T0F9 858 aaKnown RBP7.41□□□□□ -1.22
CPNE4-214ENST00000617767 PLPPR3Q6T4P5 718 aa7.41□□□□□ -1.22
CPNE4-214ENST00000617767 CNTLNQ9NXG0 1405 aa7.4□□□□□ -1.22
CPNE4-214ENST00000617767 BCORL1Q5H9F3 1711 aa7.4□□□□□ -1.22
CPNE4-214ENST00000617767 CCER2I3L3R5 266 aa7.4□□□□□ -1.23
CPNE4-214ENST00000617767 CHMP4AQ9BY43 222 aa7.4□□□□□ -1.23
CPNE4-214ENST00000617767 WASHC2CQ9Y4E1 1318 aa7.4□□□□□ -1.23
CPNE4-214ENST00000617767 MLECQ14165 292 aa7.39□□□□□ -1.23
CPNE4-214ENST00000617767 BBXQ8WY36 941 aaPredicted RBP7.39□□□□□ -1.23
CPNE4-214ENST00000617767 PLA2R1Q13018 1463 aa7.39□□□□□ -1.23
CPNE4-214ENST00000617767 ABCC1P33527 1531 aa7.39□□□□□ -1.23
CPNE4-214ENST00000617767 NAP1L5Q96NT1 182 aaPredicted RBP7.38□□□□□ -1.23
CPNE4-214ENST00000617767 CD109Q6YHK3 1445 aa7.38□□□□□ -1.23
CPNE4-214ENST00000617767 SPATA31E1Q6ZUB1 1445 aa7.38□□□□□ -1.23
CPNE4-214ENST00000617767 UGGT1Q9NYU2 1555 aa7.38□□□□□ -1.23
CPNE4-214ENST00000617767 RGS3P49796 1198 aa7.37□□□□□ -1.23
CPNE4-214ENST00000617767 RRP9O43818 475 aaKnown RBP7.37□□□□□ -1.23
CPNE4-214ENST00000617767 FAM69CQ0P6D2 419 aa7.37□□□□□ -1.23
CPNE4-214ENST00000617767 SAFB2Q14151 953 aaKnown RBP eCLIP7.37□□□□□ -1.23
CPNE4-214ENST00000617767 UHRF1BP1LA0JNW5 1464 aa7.37□□□□□ -1.23
CPNE4-214ENST00000617767 DUOX2Q9NRD8 1548 aa7.36□□□□□ -1.23
CPNE4-214ENST00000617767 TMC1Q8TDI8 760 aa7.36□□□□□ -1.23
CPNE4-214ENST00000617767 A2MP01023 1474 aa7.36□□□□□ -1.23
CPNE4-214ENST00000617767 ZBTB47Q9UFB7 747 aaPredicted RBP7.36□□□□□ -1.23
CPNE4-214ENST00000617767 TSPOAP1O95153 1857 aa7.36□□□□□ -1.23
CPNE4-214ENST00000617767 CFAP70Q5T0N1 1121 aa7.36□□□□□ -1.23
CPNE4-214ENST00000617767 TMEM132EQ6IEE7 984 aa7.35□□□□□ -1.23
CPNE4-214ENST00000617767 FAM43AQ8N2R8 423 aa7.35□□□□□ -1.23
CPNE4-214ENST00000617767 ATP7AQ04656 1500 aa7.35□□□□□ -1.23
CPNE4-214ENST00000617767 ZFYVE16Q7Z3T8 1539 aa7.35□□□□□ -1.23
CPNE4-214ENST00000617767 HAP1P54257 671 aaPredicted RBP7.35□□□□□ -1.23
CPNE4-214ENST00000617767 KANK1Q14678 1352 aa7.34□□□□□ -1.23
CPNE4-214ENST00000617767 LAS1LQ9Y4W2 734 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms