RNA–Protein interactions for RNA: ENST00000617719.4

ATXN3-251, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-251ENST00000617719 FBXW7Q969H0 707 aa9.72□□□□□ -0.85
ATXN3-251ENST00000617719 THSD4Q6ZMP0 1018 aa9.71□□□□□ -0.86
ATXN3-251ENST00000617719 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-251ENST00000617719 DDX12PQ92771 950 aa9.7□□□□□ -0.86
ATXN3-251ENST00000617719 WNT2BQ93097 391 aa9.7□□□□□ -0.86
ATXN3-251ENST00000617719 GOLGA8CPA6NN73 597 aa9.69□□□□□ -0.86
ATXN3-251ENST00000617719 NBPF3Q9H094 633 aa9.69□□□□□ -0.86
ATXN3-251ENST00000617719 PAXIP1Q6ZW49 1069 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-251ENST00000617719 RBM33Q96EV2 1170 aaKnown RBP9.68□□□□□ -0.86
ATXN3-251ENST00000617719 CFAP44Q96MT7 982 aa9.68□□□□□ -0.86
ATXN3-251ENST00000617719 C6orf132Q5T0Z8 1188 aa9.67□□□□□ -0.86
ATXN3-251ENST00000617719 EPAS1Q99814 870 aa9.67□□□□□ -0.86
ATXN3-251ENST00000617719 RABGEF1Q9UJ41 708 aa9.67□□□□□ -0.86
ATXN3-251ENST00000617719 KIAA1468Q9P260 1216 aa9.65□□□□□ -0.86
ATXN3-251ENST00000617719 PDIA6Q15084 440 aa9.64□□□□□ -0.87
ATXN3-251ENST00000617719 NBR1Q14596 966 aa9.62□□□□□ -0.87
ATXN3-251ENST00000617719 E2F4Q16254 413 aa9.61□□□□□ -0.87
ATXN3-251ENST00000617719 TSR1Q2NL82 804 aaKnown RBP9.61□□□□□ -0.87
ATXN3-251ENST00000617719 SEPT9Q9UHD8 586 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-251ENST00000617719 CCDC180Q9P1Z9 1646 aa9.6□□□□□ -0.87
ATXN3-251ENST00000617719 BCAMP50895 628 aa9.6□□□□□ -0.87
ATXN3-251ENST00000617719 ANKK1Q8NFD2 765 aa9.6□□□□□ -0.87
ATXN3-251ENST00000617719 TRIM6-TRIM34B2RNG4 842 aa9.59□□□□□ -0.87
ATXN3-251ENST00000617719 MAP3K7O43318 606 aa9.59□□□□□ -0.87
ATXN3-251ENST00000617719 PRIM1P49642 420 aaKnown RBP9.59□□□□□ -0.87
ATXN3-251ENST00000617719 EN1Q05925 392 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-251ENST00000617719 SPDYE16A6NNV3 312 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-251ENST00000617719 LAPTM4BQ86VI4 370 aa9.58□□□□□ -0.88
ATXN3-251ENST00000617719 ZFRQ96KR1 1074 aaKnown RBP9.58□□□□□ -0.88
ATXN3-251ENST00000617719 WDR70Q9NW82 654 aa9.57□□□□□ -0.88
ATXN3-251ENST00000617719 SOWAHBA6NEL2 793 aa9.56□□□□□ -0.88
ATXN3-251ENST00000617719 ONECUT3O60422 494 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-251ENST00000617719 TSKSQ9UJT2 592 aa9.55□□□□□ -0.88
ATXN3-251ENST00000617719 ARIH1Q9Y4X5 557 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-251ENST00000617719 GRXCR2A6NFK2 248 aa9.54□□□□□ -0.88
ATXN3-251ENST00000617719 FAM98CQ17RN3 349 aaKnown RBP9.53□□□□□ -0.88
ATXN3-251ENST00000617719 IFFO2Q5TF58 517 aa9.53□□□□□ -0.88
ATXN3-251ENST00000617719 WBP1LQ9NX94 342 aa9.53□□□□□ -0.88
ATXN3-251ENST00000617719 FAM198AQ9UFP1 575 aa9.51□□□□□ -0.89
ATXN3-251ENST00000617719 OSBPP22059 807 aa9.5□□□□□ -0.89
ATXN3-251ENST00000617719 PACS2Q86VP3 889 aa9.5□□□□□ -0.89
ATXN3-251ENST00000617719 CDCA7LQ96GN5 454 aa9.5□□□□□ -0.89
ATXN3-251ENST00000617719 A0A0G2JS52 829 aa9.49□□□□□ -0.89
ATXN3-251ENST00000617719 C3orf80F5H4A9 247 aa9.49□□□□□ -0.89
ATXN3-251ENST00000617719 SMAPO00193 183 aa9.49□□□□□ -0.89
ATXN3-251ENST00000617719 CDHR5Q9HBB8 845 aa9.49□□□□□ -0.89
ATXN3-251ENST00000617719 TSHZ2Q9NRE2 1034 aa9.49□□□□□ -0.89
ATXN3-251ENST00000617719 ABCC9O60706 1549 aa9.48□□□□□ -0.89
ATXN3-251ENST00000617719 PRSS12P56730 875 aa9.48□□□□□ -0.89
ATXN3-251ENST00000617719 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-251ENST00000617719 ITGBL1O95965 494 aaPredicted RBP9.47□□□□□ -0.89
ATXN3-251ENST00000617719 LRCH3Q96II8 777 aa9.47□□□□□ -0.89
ATXN3-251ENST00000617719 HPS5Q9UPZ3 1129 aa9.47□□□□□ -0.89
ATXN3-251ENST00000617719 TSR3Q9UJK0 312 aaKnown RBP9.45□□□□□ -0.9
ATXN3-251ENST00000617719 NYAP1Q6ZVC0 841 aa9.44□□□□□ -0.9
ATXN3-251ENST00000617719 CERKQ8TCT0 537 aa9.44□□□□□ -0.9
ATXN3-251ENST00000617719 SAMD7Q7Z3H4 446 aa9.43□□□□□ -0.9
ATXN3-251ENST00000617719 TATDN2Q93075 761 aa9.42□□□□□ -0.9
ATXN3-251ENST00000617719 RGS20O76081 388 aa9.41□□□□□ -0.9
ATXN3-251ENST00000617719 PNMA3Q9UL41 463 aa9.41□□□□□ -0.9
ATXN3-251ENST00000617719 KCNV2Q8TDN2 545 aa9.4□□□□□ -0.9
ATXN3-251ENST00000617719 NPDC1Q9NQX5 325 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-251ENST00000617719 NBPF26B4DH59 902 aa9.39□□□□□ -0.91
ATXN3-251ENST00000617719 MLLT3P42568 568 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-251ENST00000617719 PPP4CP60510 307 aa9.39□□□□□ -0.91
ATXN3-251ENST00000617719 KCNC4Q03721 635 aa9.39□□□□□ -0.91
ATXN3-251ENST00000617719 NUDT18Q6ZVK8 323 aa9.39□□□□□ -0.91
ATXN3-251ENST00000617719 PADI6Q6TGC4 694 aa9.37□□□□□ -0.91
ATXN3-251ENST00000617719 ARHGEF1Q92888 912 aaKnown RBP9.37□□□□□ -0.91
ATXN3-251ENST00000617719 TTC13Q8NBP0 860 aa9.36□□□□□ -0.91
ATXN3-251ENST00000617719 RBM27Q9P2N5 1060 aaKnown RBP9.36□□□□□ -0.91
ATXN3-251ENST00000617719 RNF40O75150 1001 aa9.33□□□□□ -0.92
ATXN3-251ENST00000617719 TJAP1Q5JTD0 557 aa9.33□□□□□ -0.92
ATXN3-251ENST00000617719 IRX2Q9BZI1 471 aaPredicted RBP9.33□□□□□ -0.92
ATXN3-251ENST00000617719 APLP1P51693 650 aa9.31□□□□□ -0.92
ATXN3-251ENST00000617719 SWT1Q5T5J6 900 aaKnown RBP9.3□□□□□ -0.92
ATXN3-251ENST00000617719 MTRQ99707 1265 aa9.3□□□□□ -0.92
ATXN3-251ENST00000617719 EYA1Q99502 592 aa9.29□□□□□ -0.92
ATXN3-251ENST00000617719 HDGFP51858 240 aaKnown RBP9.28□□□□□ -0.92
ATXN3-251ENST00000617719 ZNF516Q92618 1163 aa9.28□□□□□ -0.92
ATXN3-251ENST00000617719 PTGDRQ13258 359 aa9.27□□□□□ -0.93
ATXN3-251ENST00000617719 SEMA3EO15041 775 aa9.25□□□□□ -0.93
ATXN3-251ENST00000617719 IL21Q9HBE4 155 aa9.25□□□□□ -0.93
ATXN3-251ENST00000617719 NUTM2FA1L443 756 aa9.24□□□□□ -0.93
ATXN3-251ENST00000617719 FAM161AQ3B820 660 aa9.24□□□□□ -0.93
ATXN3-251ENST00000617719 SLF2Q8IX21 1173 aa9.23□□□□□ -0.93
ATXN3-251ENST00000617719 NKX2-3Q8TAU0 364 aa9.23□□□□□ -0.93
ATXN3-251ENST00000617719 COPS2P61201 443 aa9.22□□□□□ -0.93
ATXN3-251ENST00000617719 PPP1R18Q6NYC8 613 aa9.22□□□□□ -0.93
ATXN3-251ENST00000617719 ADGRG1Q9Y653 693 aa9.22□□□□□ -0.93
ATXN3-251ENST00000617719 P3H3Q8IVL6 736 aa9.21□□□□□ -0.94
ATXN3-251ENST00000617719 DNAJB2P25686 324 aa9.18□□□□□ -0.94
ATXN3-251ENST00000617719 PLCB2Q00722 1185 aa9.18□□□□□ -0.94
ATXN3-251ENST00000617719 RBM46Q8TBY0 533 aaKnown RBP9.18□□□□□ -0.94
ATXN3-251ENST00000617719 PRKD2Q9BZL6 878 aa9.18□□□□□ -0.94
ATXN3-251ENST00000617719 RCCD1A6NED2 376 aa9.17□□□□□ -0.94
ATXN3-251ENST00000617719 NECTIN2Q92692 538 aa9.17□□□□□ -0.94
ATXN3-251ENST00000617719 TMEM134Q9H6X4 195 aa9.17□□□□□ -0.94
ATXN3-251ENST00000617719 SLC4A3P48751 1232 aa9.16□□□□□ -0.94
ATXN3-251ENST00000617719 Q6ZNB5 142 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms