RNA–Protein interactions for RNA: ENST00000617489.1

MALAT1-210, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 318 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-210ENST00000617489 IFFO2Q5TF58 517 aa10.33□□□□□ -0.76
MALAT1-210ENST00000617489 RGS20O76081 388 aa10.31□□□□□ -0.76
MALAT1-210ENST00000617489 DPYSL4O14531 572 aa10.3□□□□□ -0.76
MALAT1-210ENST00000617489 EPAS1Q99814 870 aa10.3□□□□□ -0.76
MALAT1-210ENST00000617489 KIAA1468Q9P260 1216 aa10.3□□□□□ -0.76
MALAT1-210ENST00000617489 A0A0G2JS52 829 aa10.29□□□□□ -0.76
MALAT1-210ENST00000617489 RBM33Q96EV2 1170 aaKnown RBP10.29□□□□□ -0.76
MALAT1-210ENST00000617489 BCAMP50895 628 aa10.28□□□□□ -0.76
MALAT1-210ENST00000617489 C6orf132Q5T0Z8 1188 aa10.28□□□□□ -0.76
MALAT1-210ENST00000617489 LAPTM4BQ86VI4 370 aa10.28□□□□□ -0.76
MALAT1-210ENST00000617489 IRX2Q9BZI1 471 aaPredicted RBP10.26□□□□□ -0.77
MALAT1-210ENST00000617489 SOWAHBA6NEL2 793 aa10.25□□□□□ -0.77
MALAT1-210ENST00000617489 CAMK2BQ13554 666 aa10.25□□□□□ -0.77
MALAT1-210ENST00000617489 DDX12PQ92771 950 aa10.25□□□□□ -0.77
MALAT1-210ENST00000617489 ZFRQ96KR1 1074 aaKnown RBP10.25□□□□□ -0.77
MALAT1-210ENST00000617489 SEPT9Q9UHD8 586 aaPredicted RBP10.25□□□□□ -0.77
MALAT1-210ENST00000617489 ONECUT3O60422 494 aaPredicted RBP10.24□□□□□ -0.77
MALAT1-210ENST00000617489 TRIM6-TRIM34B2RNG4 842 aa10.21□□□□□ -0.77
MALAT1-210ENST00000617489 NYAP1Q6ZVC0 841 aa10.21□□□□□ -0.77
MALAT1-210ENST00000617489 WBP1LQ9NX94 342 aa10.21□□□□□ -0.77
MALAT1-210ENST00000617489 BBXQ8WY36 941 aaPredicted RBP10.2□□□□□ -0.78
MALAT1-210ENST00000617489 ITGBL1O95965 494 aaPredicted RBP10.19□□□□□ -0.78
MALAT1-210ENST00000617489 FAM98CQ17RN3 349 aaKnown RBP10.19□□□□□ -0.78
MALAT1-210ENST00000617489 MAP3K7O43318 606 aa10.18□□□□□ -0.78
MALAT1-210ENST00000617489 KCNC4Q03721 635 aa10.18□□□□□ -0.78
MALAT1-210ENST00000617489 NBR1Q14596 966 aa10.18□□□□□ -0.78
MALAT1-210ENST00000617489 PACS2Q86VP3 889 aa10.18□□□□□ -0.78
MALAT1-210ENST00000617489 LRCH3Q96II8 777 aa10.18□□□□□ -0.78
MALAT1-210ENST00000617489 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.18□□□□□ -0.78
MALAT1-210ENST00000617489 TSR3Q9UJK0 312 aaKnown RBP10.16□□□□□ -0.78
MALAT1-210ENST00000617489 HPS5Q9UPZ3 1129 aa10.16□□□□□ -0.78
MALAT1-210ENST00000617489 SPRYD3Q8NCJ5 442 aa10.14□□□□□ -0.79
MALAT1-210ENST00000617489 EN1Q05925 392 aaPredicted RBP10.13□□□□□ -0.79
MALAT1-210ENST00000617489 TSR1Q2NL82 804 aaKnown RBP10.13□□□□□ -0.79
MALAT1-210ENST00000617489 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.13□□□□□ -0.79
MALAT1-210ENST00000617489 SPDYE16A6NNV3 312 aaPredicted RBP10.12□□□□□ -0.79
MALAT1-210ENST00000617489 PPP4CP60510 307 aa10.11□□□□□ -0.79
MALAT1-210ENST00000617489 PDIA6Q15084 440 aa10.11□□□□□ -0.79
MALAT1-210ENST00000617489 WDR70Q9NW82 654 aa10.11□□□□□ -0.79
MALAT1-210ENST00000617489 TSKSQ9UJT2 592 aa10.11□□□□□ -0.79
MALAT1-210ENST00000617489 GRXCR2A6NFK2 248 aa10.09□□□□□ -0.79
MALAT1-210ENST00000617489 SMAPO00193 183 aa10.08□□□□□ -0.8
MALAT1-210ENST00000617489 E2F4Q16254 413 aa10.08□□□□□ -0.8
MALAT1-210ENST00000617489 CDCA7LQ96GN5 454 aa10.08□□□□□ -0.8
MALAT1-210ENST00000617489 Q6ZNB5 142 aa10.07□□□□□ -0.8
MALAT1-210ENST00000617489 PRSS12P56730 875 aa10.06□□□□□ -0.8
MALAT1-210ENST00000617489 HDGFP51858 240 aaKnown RBP10.05□□□□□ -0.8
MALAT1-210ENST00000617489 SAMD7Q7Z3H4 446 aa10.05□□□□□ -0.8
MALAT1-210ENST00000617489 CERKQ8TCT0 537 aa10.05□□□□□ -0.8
MALAT1-210ENST00000617489 CFAP44Q96MT7 982 aa10.05□□□□□ -0.8
MALAT1-210ENST00000617489 PNMA3Q9UL41 463 aa10.04□□□□□ -0.8
MALAT1-210ENST00000617489 NBPF26B4DH59 902 aa10.02□□□□□ -0.81
MALAT1-210ENST00000617489 RNF40O75150 1001 aa10.02□□□□□ -0.81
MALAT1-210ENST00000617489 PAXIP1Q6ZW49 1069 aaPredicted RBP10.02□□□□□ -0.81
MALAT1-210ENST00000617489 TATDN2Q93075 761 aa10.02□□□□□ -0.81
MALAT1-210ENST00000617489 FAM198AQ9UFP1 575 aa10□□□□□ -0.81
MALAT1-210ENST00000617489 PRIM1P49642 420 aaKnown RBP9.98□□□□□ -0.81
MALAT1-210ENST00000617489 TJAP1Q5JTD0 557 aa9.98□□□□□ -0.81
MALAT1-210ENST00000617489 NUDT18Q6ZVK8 323 aa9.98□□□□□ -0.81
MALAT1-210ENST00000617489 C3orf80F5H4A9 247 aa9.96□□□□□ -0.82
MALAT1-210ENST00000617489 OSBPP22059 807 aa9.96□□□□□ -0.82
MALAT1-210ENST00000617489 LAPTM4AQ15012 233 aa9.96□□□□□ -0.82
MALAT1-210ENST00000617489 MTRQ99707 1265 aa9.96□□□□□ -0.82
MALAT1-210ENST00000617489 CDHR5Q9HBB8 845 aa9.96□□□□□ -0.82
MALAT1-210ENST00000617489 IL21Q9HBE4 155 aa9.96□□□□□ -0.82
MALAT1-210ENST00000617489 ARIH1Q9Y4X5 557 aaPredicted RBP9.96□□□□□ -0.82
MALAT1-210ENST00000617489 GFRA3O60609 400 aa9.95□□□□□ -0.82
MALAT1-210ENST00000617489 PRKD2Q9BZL6 878 aa9.94□□□□□ -0.82
MALAT1-210ENST00000617489 AMER1Q5JTC6 1135 aaPredicted RBP9.92□□□□□ -0.82
MALAT1-210ENST00000617489 PPP1R18Q6NYC8 613 aa9.92□□□□□ -0.82
MALAT1-210ENST00000617489 ZNF516Q92618 1163 aa9.91□□□□□ -0.82
MALAT1-210ENST00000617489 RBM27Q9P2N5 1060 aaKnown RBP9.91□□□□□ -0.82
MALAT1-210ENST00000617489 SLC4A3P48751 1232 aa9.9□□□□□ -0.82
MALAT1-210ENST00000617489 APLP1P51693 650 aa9.9□□□□□ -0.82
MALAT1-210ENST00000617489 NECTIN2Q92692 538 aa9.9□□□□□ -0.82
MALAT1-210ENST00000617489 SWT1Q5T5J6 900 aaKnown RBP9.89□□□□□ -0.83
MALAT1-210ENST00000617489 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.89□□□□□ -0.83
MALAT1-210ENST00000617489 NISCHQ9Y2I1 1504 aa9.88□□□□□ -0.83
MALAT1-210ENST00000617489 TRAF7Q6Q0C0 670 aa9.88□□□□□ -0.83
MALAT1-210ENST00000617489 PADI6Q6TGC4 694 aa9.88□□□□□ -0.83
MALAT1-210ENST00000617489 SLF2Q8IX21 1173 aa9.88□□□□□ -0.83
MALAT1-210ENST00000617489 COPS2P61201 443 aa9.87□□□□□ -0.83
MALAT1-210ENST00000617489 GGCXP38435 758 aa9.86□□□□□ -0.83
MALAT1-210ENST00000617489 NKX2-3Q8TAU0 364 aa9.86□□□□□ -0.83
MALAT1-210ENST00000617489 V9GY48 417 aaPredicted RBP9.86□□□□□ -0.83
MALAT1-210ENST00000617489 NPDC1Q9NQX5 325 aaPredicted RBP9.85□□□□□ -0.83
MALAT1-210ENST00000617489 NRG2O14511 850 aaPredicted RBP9.83□□□□□ -0.84
MALAT1-210ENST00000617489 TTC13Q8NBP0 860 aa9.83□□□□□ -0.84
MALAT1-210ENST00000617489 RTN4Q9NQC3 1192 aaKnown RBP9.83□□□□□ -0.84
MALAT1-210ENST00000617489 PRR14Q9BWN1 585 aa9.8□□□□□ -0.84
MALAT1-210ENST00000617489 ZPR1O75312 459 aa9.79□□□□□ -0.84
MALAT1-210ENST00000617489 EYA1Q99502 592 aa9.79□□□□□ -0.84
MALAT1-210ENST00000617489 PDZRN3Q9UPQ7 1066 aa9.79□□□□□ -0.84
MALAT1-210ENST00000617489 PCDHB3Q9Y5E6 796 aa9.79□□□□□ -0.84
MALAT1-210ENST00000617489 MLLT3P42568 568 aaPredicted RBP9.77□□□□□ -0.85
MALAT1-210ENST00000617489 ARHGEF1Q92888 912 aaKnown RBP9.77□□□□□ -0.85
MALAT1-210ENST00000617489 TMUB1Q9BVT8 246 aa9.77□□□□□ -0.85
MALAT1-210ENST00000617489 LCE2BO14633 110 aa9.76□□□□□ -0.85
MALAT1-210ENST00000617489 RBM46Q8TBY0 533 aaKnown RBP9.75□□□□□ -0.85
MALAT1-210ENST00000617489 NUTM2FA1L443 756 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms